| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is orf8
Identifier: 126698091
GI number: 126698091
Start: 603579
End: 603809
Strand: Direct
Name: orf8
Synonym: CD0510A
Alternate gene names: NA
Gene position: 603579-603809 (Clockwise)
Preceding gene: 126698090
Following gene: 126698093
Centisome position: 14.07
GC content: 37.66
Gene sequence:
>231_bases ATGAGAAAAGAATATTCCAGAATTCCGTTTCCAATGATTGTAAGGGCTTGTGATGGCGATACAGAAGCGATTAACCAGAT TCTTCATCATTACAGAGGGTACATTACAAAACGCTCTCTTAGACTGATGAAAGATGAGTATGGCAATCAAAGTATGGTCG TTGATGAAGTTTTACGTGGACGAATGGAAACCAGACTGATTACAAAAATCCTGTCATTTGAAATTGAGTGA
Upstream 100 bases:
>100_bases AAATAGCGGATTTACTGAAATTGAACCGCTCTACTGTCTATCGACATAGAACCAGTGGACTAGACTTAATCAAGAAGTTT ATGGAGGAGGAAAATGAAGA
Downstream 100 bases:
>100_bases CACTGCCCTATTTCTTTGTTCCTTGAAAACTGAATAATAGCAGTCGAATACATTTCGATAAGAAAAGAGCCAGCGGAGCT GACCGCCATGACCTATCCCC
Product: conjugative transposon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MRKEYSRIPFPMIVRACDGDTEAINQILHHYRGYITKRSLRLMKDEYGNQSMVVDEVLRGRMETRLITKILSFEIE
Sequences:
>Translated_76_residues MRKEYSRIPFPMIVRACDGDTEAINQILHHYRGYITKRSLRLMKDEYGNQSMVVDEVLRGRMETRLITKILSFEIE >Mature_76_residues MRKEYSRIPFPMIVRACDGDTEAINQILHHYRGYITKRSLRLMKDEYGNQSMVVDEVLRGRMETRLITKILSFEIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9064; Mature: 9064
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKEYSRIPFPMIVRACDGDTEAINQILHHYRGYITKRSLRLMKDEYGNQSMVVDEVLRG CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RMETRLITKILSFEIE HHHHHHHHHHHHHCCC >Mature Secondary Structure MRKEYSRIPFPMIVRACDGDTEAINQILHHYRGYITKRSLRLMKDEYGNQSMVVDEVLRG CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RMETRLITKILSFEIE HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA