Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is blaR1 [H]

Identifier: 126698034

GI number: 126698034

Start: 545446

End: 546318

Strand: Direct

Name: blaR1 [H]

Synonym: CD0458

Alternate gene names: 126698034

Gene position: 545446-546318 (Clockwise)

Preceding gene: 126698033

Following gene: 126698035

Centisome position: 12.71

GC content: 27.38

Gene sequence:

>873_bases
ATGGGAGTATATTATGTAGGAAGAAAGCATAACAACACAAAACAAAAACATGATAAGAATCATATAAACTCTGAATTAAA
TAAATCCAAAGTTGAAAACAAAAAAGAAAAAATTAATATGGTTGACTATAGTGATTGTTTTGAAGGTATTAGTGGAGGAG
CTATTTTTTATAATACTAAAAATAAAGAATATAATATATATAACAAAGAATTAATTGAAACAAGAAGGTCACCATGTTCT
ACTTTTAAAATAGTTTCAACTTTAATTGGTTTAGAAAAAGGGGTAATAAACTCAAAAGAATCAGTTATGGGATATGATGG
TACAGAGTATCCAAATAAAAATTGGAATAAAAATCTTAGTTTAGAAGAGGCATTTAAGGAGTCTTGTGTTTGGTACTACA
AAAAATTGATAGATAAAGTTGATGCTAAATCTGTCCAAAACATTTTAGATGATTTAAAGTATGGGAATTGCGATATTAGC
GAATGGGAAGGCGATTTAAAAAATGGAAAGGGACATTTAAATGGATTTTGGTTAGAATCTTCATTACAAATATCTCCAAA
AGAACAAGTGCAAACAATGGCAAAAATATTTGAGGGAGATACAAACTTTAAAAAAGAGCATATTAATATTTTAAGAGATA
TTATGAAAATAGATGTAAATGATAAAAACATAAATGTATATGGAAAAACTGGAACAGGATTTGATGAAAAAAATAAACGT
GTGGATGCATGGTTTGTTGGTATGCTAGAGCGTGAAGGTGACACCTATTATTTTGCTATTAAATCAGATGATTCCAATAA
AGAAATTACAGGGCCAAAGGTAAAGGAAATTGCAATTAATATAATTAAGAAATATTATAGTGTAAGGGAATAA

Upstream 100 bases:

>100_bases
TTTTAAAGGTGAACTATAAACTTATGTAGAGGAGATGGTATAAAGTATGAAAAGAAAAAATAATTTTATTTGGATAGTTA
TTCTTCTAGTTGTTGTAGCT

Downstream 100 bases:

>100_bases
ACTTAATTTTATTTGTAAATATTATTTACCTATAGTCTGTAATATTTATTAAATAATTTTACTAAATTGAGTCTATATAG
AGCAAAACTCCTTTAGTACA

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MGVYYVGRKHNNTKQKHDKNHINSELNKSKVENKKEKINMVDYSDCFEGISGGAIFYNTKNKEYNIYNKELIETRRSPCS
TFKIVSTLIGLEKGVINSKESVMGYDGTEYPNKNWNKNLSLEEAFKESCVWYYKKLIDKVDAKSVQNILDDLKYGNCDIS
EWEGDLKNGKGHLNGFWLESSLQISPKEQVQTMAKIFEGDTNFKKEHINILRDIMKIDVNDKNINVYGKTGTGFDEKNKR
VDAWFVGMLEREGDTYYFAIKSDDSNKEITGPKVKEIAINIIKKYYSVRE

Sequences:

>Translated_290_residues
MGVYYVGRKHNNTKQKHDKNHINSELNKSKVENKKEKINMVDYSDCFEGISGGAIFYNTKNKEYNIYNKELIETRRSPCS
TFKIVSTLIGLEKGVINSKESVMGYDGTEYPNKNWNKNLSLEEAFKESCVWYYKKLIDKVDAKSVQNILDDLKYGNCDIS
EWEGDLKNGKGHLNGFWLESSLQISPKEQVQTMAKIFEGDTNFKKEHINILRDIMKIDVNDKNINVYGKTGTGFDEKNKR
VDAWFVGMLEREGDTYYFAIKSDDSNKEITGPKVKEIAINIIKKYYSVRE
>Mature_289_residues
GVYYVGRKHNNTKQKHDKNHINSELNKSKVENKKEKINMVDYSDCFEGISGGAIFYNTKNKEYNIYNKELIETRRSPCST
FKIVSTLIGLEKGVINSKESVMGYDGTEYPNKNWNKNLSLEEAFKESCVWYYKKLIDKVDAKSVQNILDDLKYGNCDISE
WEGDLKNGKGHLNGFWLESSLQISPKEQVQTMAKIFEGDTNFKKEHINILRDIMKIDVNDKNINVYGKTGTGFDEKNKRV
DAWFVGMLEREGDTYYFAIKSDDSNKEITGPKVKEIAINIIKKYYSVRE

Specific function: BlaR1 is a potential penicillin-binding protein required for induction of beta-lactamase in Bacillus licheniformis [H]

COG id: COG2602

COG function: function code V; Beta-lactamase class D

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M56 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001460
- InterPro:   IPR008756 [H]

Pfam domain/function: PF05569 Peptidase_M56; PF00905 Transpeptidase [H]

EC number: NA

Molecular weight: Translated: 33551; Mature: 33420

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00337 BETA_LACTAMASE_D

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVYYVGRKHNNTKQKHDKNHINSELNKSKVENKKEKINMVDYSDCFEGISGGAIFYNTK
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECC
NKEYNIYNKELIETRRSPCSTFKIVSTLIGLEKGVINSKESVMGYDGTEYPNKNWNKNLS
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCC
LEEAFKESCVWYYKKLIDKVDAKSVQNILDDLKYGNCDISEWEGDLKNGKGHLNGFWLES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEEEC
SLQISPKEQVQTMAKIFEGDTNFKKEHINILRDIMKIDVNDKNINVYGKTGTGFDEKNKR
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCE
VDAWFVGMLEREGDTYYFAIKSDDSNKEITGPKVKEIAINIIKKYYSVRE
EHHHEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GVYYVGRKHNNTKQKHDKNHINSELNKSKVENKKEKINMVDYSDCFEGISGGAIFYNTK
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECC
NKEYNIYNKELIETRRSPCSTFKIVSTLIGLEKGVINSKESVMGYDGTEYPNKNWNKNLS
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCC
LEEAFKESCVWYYKKLIDKVDAKSVQNILDDLKYGNCDISEWEGDLKNGKGHLNGFWLES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEEEC
SLQISPKEQVQTMAKIFEGDTNFKKEHINILRDIMKIDVNDKNINVYGKTGTGFDEKNKR
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCE
VDAWFVGMLEREGDTYYFAIKSDDSNKEITGPKVKEIAINIIKKYYSVRE
EHHHEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040663; 3260234; 2404938 [H]