| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is mleN [H]
Identifier: 126698023
GI number: 126698023
Start: 534026
End: 535447
Strand: Direct
Name: mleN [H]
Synonym: CD0449
Alternate gene names: 126698023
Gene position: 534026-535447 (Clockwise)
Preceding gene: 126698022
Following gene: 126698024
Centisome position: 12.45
GC content: 32.63
Gene sequence:
>1422_bases ATGAAAGAGCGAGAATGTAGAAAAGCAAGTCTGTTTGATGCAATGATACCAATTACTTGTTTGATATTATTTTTAAGTCT AGGAGTATTAGTGTATGGTTCATCACCTCATGTACCACTAATAGGAGCAGCAGCAGTAGCAGGACTTGTGGCTGTATATA GACTTGGATTTAAATGGAAAGAGTTAGAATTAAGTATGTTTAATAGTATAAAGATGGCAATGCAAGCAATCTTAATCATA ATTATAATAGGCGTACTTATAGGAACTTGGATAGTAAGTGGAGTAGTTCCATGTATGATTTACTGGGGACTAAAAATTTT ATCACCAAATATTTTTTTAGTAGCATCAACATTAGTCTGTGCAATAGTATCTCTTGCGACAGGTTCATCTTGGAGCACAA TGGGTACAGTAGGAGTAGCTCTTTTAGGAATTGGTCAAAGTTTAGGTATGCCAATTGGATTAATCGTAGGTTCTATAATA TCTGGAGCTTACTTTGGAGATAAACTATCACCTTTATCTGAAACGACTAACTTAGCTCCAGCAATGGCAGGAACAGATTT GTTTACACATATAAAATATATGCTATATTCGACTATACCATCATTATTAATTTGTTTAGTAATTTATGGTGTAATTGGAA TGAAGTATTCAGGTCAAGCACTAGATATAAAACAAATAGAATTAATTAGGTCTACATTAGATTCTACATTTAATACTTTA TCACCAGTATTATTATTAGCTCCAGCAATAGTAATTGGATTAGTTGTATTTAAAGTTCCTGCTATACCAGGGCTTATAGT AGGTGCTGTATTGGGAGTATTGTTTGCAGTAGTTTTTCAAGGAGAATCTATGAATACGATATTAGATGCAGCACAAAATG GATATGTTTCGTCAACACAAATACAAGAGGTAGATGCTTTATTATCTAAAGGTGGGATTATGAATATGATGTCCACTGTA TCCTTAACAATATGCGCTTTATCTCTTGGAGGTATTTTAGAAAAAACAGGTATGCTTGAAGTAGTAGCGTCTTCTTTACT AAGATTAGCAAAGGGTGTATTTGGAACAGTATTATGTACTATGGTAACTTGTACAATTACCAATATAATAGCAGGTGAAC AATATCTATCTATAGTTATACCAGGAAGAATGTATAATAAGGAATATAAAAAGAGAGGTATACATCCTAAGATGTTGTCG AGAGCTTTAGAAGATAGTGGAACTTTAACTTCTCCATTAGTACCATGGAATACATGCGGGGCGTATATAACAGCAACATT AGGTGTATCTGCACTAACATATGGTCCATACGCTTTATTAAATATTATAAATCCAATAGTATCTTTAGTATTAATTGCAT GTAAGTTTAAAATAGCAAGAATAGAAGATGAACCTGAAACTTGTTTAAATTTTGATGTTTGA
Upstream 100 bases:
>100_bases TTTTATTAACTTATGGGGGTATCATGTCATCTAGTACGAGCAAATATGTTGCAAAAAAAATTATAGTGTAGTGTTTAAAT AATTAGGAGGAAACTATTTT
Downstream 100 bases:
>100_bases TATTTTAATTGTTTGTATAAATTTTTTATAGAAAAAGATTTCTTTTAGACTTGCCTAAAAATTAGGCAAGTCTTTTAAGT ATGTTCTGATTATAAGAGCA
Product: Na+/H+ antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MKERECRKASLFDAMIPITCLILFLSLGVLVYGSSPHVPLIGAAAVAGLVAVYRLGFKWKELELSMFNSIKMAMQAILII IIIGVLIGTWIVSGVVPCMIYWGLKILSPNIFLVASTLVCAIVSLATGSSWSTMGTVGVALLGIGQSLGMPIGLIVGSII SGAYFGDKLSPLSETTNLAPAMAGTDLFTHIKYMLYSTIPSLLICLVIYGVIGMKYSGQALDIKQIELIRSTLDSTFNTL SPVLLLAPAIVIGLVVFKVPAIPGLIVGAVLGVLFAVVFQGESMNTILDAAQNGYVSSTQIQEVDALLSKGGIMNMMSTV SLTICALSLGGILEKTGMLEVVASSLLRLAKGVFGTVLCTMVTCTITNIIAGEQYLSIVIPGRMYNKEYKKRGIHPKMLS RALEDSGTLTSPLVPWNTCGAYITATLGVSALTYGPYALLNIINPIVSLVLIACKFKIARIEDEPETCLNFDV
Sequences:
>Translated_473_residues MKERECRKASLFDAMIPITCLILFLSLGVLVYGSSPHVPLIGAAAVAGLVAVYRLGFKWKELELSMFNSIKMAMQAILII IIIGVLIGTWIVSGVVPCMIYWGLKILSPNIFLVASTLVCAIVSLATGSSWSTMGTVGVALLGIGQSLGMPIGLIVGSII SGAYFGDKLSPLSETTNLAPAMAGTDLFTHIKYMLYSTIPSLLICLVIYGVIGMKYSGQALDIKQIELIRSTLDSTFNTL SPVLLLAPAIVIGLVVFKVPAIPGLIVGAVLGVLFAVVFQGESMNTILDAAQNGYVSSTQIQEVDALLSKGGIMNMMSTV SLTICALSLGGILEKTGMLEVVASSLLRLAKGVFGTVLCTMVTCTITNIIAGEQYLSIVIPGRMYNKEYKKRGIHPKMLS RALEDSGTLTSPLVPWNTCGAYITATLGVSALTYGPYALLNIINPIVSLVLIACKFKIARIEDEPETCLNFDV >Mature_473_residues MKERECRKASLFDAMIPITCLILFLSLGVLVYGSSPHVPLIGAAAVAGLVAVYRLGFKWKELELSMFNSIKMAMQAILII IIIGVLIGTWIVSGVVPCMIYWGLKILSPNIFLVASTLVCAIVSLATGSSWSTMGTVGVALLGIGQSLGMPIGLIVGSII SGAYFGDKLSPLSETTNLAPAMAGTDLFTHIKYMLYSTIPSLLICLVIYGVIGMKYSGQALDIKQIELIRSTLDSTFNTL SPVLLLAPAIVIGLVVFKVPAIPGLIVGAVLGVLFAVVFQGESMNTILDAAQNGYVSSTQIQEVDALLSKGGIMNMMSTV SLTICALSLGGILEKTGMLEVVASSLLRLAKGVFGTVLCTMVTCTITNIIAGEQYLSIVIPGRMYNKEYKKRGIHPKMLS RALEDSGTLTSPLVPWNTCGAYITATLGVSALTYGPYALLNIINPIVSLVLIACKFKIARIEDEPETCLNFDV
Specific function: Couples proton uptake and Na(+) efflux to the substrate- product malate/lactate antiport, in an electroneutral malate- 2H(+)/Na(+)-lactate exchange. Plays a role in supporting growth to high density on malate at reduced protonmotive force [H]
COG id: COG1757
COG function: function code C; Na+/H+ antiporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nhaC Na(+)/H(+) antiporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004770 - InterPro: IPR018461 [H]
Pfam domain/function: PF03553 Na_H_antiporter [H]
EC number: NA
Molecular weight: Translated: 50278; Mature: 50278
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKERECRKASLFDAMIPITCLILFLSLGVLVYGSSPHVPLIGAAAVAGLVAVYRLGFKWK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCHH ELELSMFNSIKMAMQAILIIIIIGVLIGTWIVSGVVPCMIYWGLKILSPNIFLVASTLVC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AIVSLATGSSWSTMGTVGVALLGIGQSLGMPIGLIVGSIISGAYFGDKLSPLSETTNLAP HHHHHHCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCH AMAGTDLFTHIKYMLYSTIPSLLICLVIYGVIGMKYSGQALDIKQIELIRSTLDSTFNTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH SPVLLLAPAIVIGLVVFKVPAIPGLIVGAVLGVLFAVVFQGESMNTILDAAQNGYVSSTQ HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHH IQEVDALLSKGGIMNMMSTVSLTICALSLGGILEKTGMLEVVASSLLRLAKGVFGTVLCT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVTCTITNIIAGEQYLSIVIPGRMYNKEYKKRGIHPKMLSRALEDSGTLTSPLVPWNTCG HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHH AYITATLGVSALTYGPYALLNIINPIVSLVLIACKFKIARIEDEPETCLNFDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHCCCCC >Mature Secondary Structure MKERECRKASLFDAMIPITCLILFLSLGVLVYGSSPHVPLIGAAAVAGLVAVYRLGFKWK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCHH ELELSMFNSIKMAMQAILIIIIIGVLIGTWIVSGVVPCMIYWGLKILSPNIFLVASTLVC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AIVSLATGSSWSTMGTVGVALLGIGQSLGMPIGLIVGSIISGAYFGDKLSPLSETTNLAP HHHHHHCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCH AMAGTDLFTHIKYMLYSTIPSLLICLVIYGVIGMKYSGQALDIKQIELIRSTLDSTFNTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH SPVLLLAPAIVIGLVVFKVPAIPGLIVGAVLGVLFAVVFQGESMNTILDAAQNGYVSSTQ HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHH IQEVDALLSKGGIMNMMSTVSLTICALSLGGILEKTGMLEVVASSLLRLAKGVFGTVLCT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVTCTITNIIAGEQYLSIVIPGRMYNKEYKKRGIHPKMLSRALEDSGTLTSPLVPWNTCG HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHH AYITATLGVSALTYGPYALLNIINPIVSLVLIACKFKIARIEDEPETCLNFDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 10903309 [H]