Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697989

Identifier: 126697989

GI number: 126697989

Start: 489451

End: 491583

Strand: Direct

Name: 126697989

Synonym: CD0419

Alternate gene names: NA

Gene position: 489451-491583 (Clockwise)

Preceding gene: 126697988

Following gene: 126697990

Centisome position: 11.41

GC content: 37.13

Gene sequence:

>2133_bases
ATGGGAAAGAAGCTGAAAAAGGATTTTAAGGAAAGGCATAAGGCAAGCCTTGAAAGAGAGATGTTTCATAGTAAAACAGA
TACGATACCTGAAGAAAGTAAGCTAAAACATAACGATGATTACAGAGGTAAAATCGTTCATGAGAAAGAACGGTTTCAGG
ATAAAGTGCATGAAAAAACAAGTAAGGTAAGTGCTGATAATGAAAAGTCTTATGGAACATCCAAGAGAAACGAAAAATAT
AGAGCTTCAGATAAGGGAGACGTAAATTCCGCAATTGAAACGGGAAGATCAGATTATATTACGGAGGTTAAGGATGGAAA
AAGCTATGATCCTTTAGGAAAAGACCTTGATAATGATGGGATTATAGACAGATACGATAATGACTTTAGGGATAGCGACT
ATTTTGAGTCAACCTATGATGTCGAGGATAATCTTCATCATAAAGCAGAAAATACAAATAGTTTCTCAAAAAGCCAAAAA
GCTCAAAAGAGCAGGTATAAGAGGAAAAACTACACCGATAGCCTTTATACAAGGAAAAAGGATGATGTGTTAAAGGAAAA
TAAGCTTGAAGATAAAAAGACTGGAAAAGATACTGCAAGCAAAAAAGTTCATAGCAGTATTTATAAAGAGCAGAAGAAAA
AGCTAAAAAAAGACATGGTAAAGGTATCTGCCCTTTCAGGACTTGCTAAAGGAAGTGAAACCGTAAGAGATTACTTATCT
CATGGAAGTGATGAAAATCAAGGAGTGGAAGCAGGAGAAAAGACAGCAGATACAAGCTCAAAACTCATTCATGGCATAAA
GAATTACTCGGATAAGAAAAGAGCTAAAAGAGGCTATGACCTTACAAATAAGGACTATAAAATCAGAAAACGTAAGTCAA
AGTTGGAATTTCGTGATGCCAAAAAGGAACTGAAAAAGACGGATGAGTATAAAAGAGCAAGTGCATATAAAAGATTTCAA
AAGAAAAATCAGGTAAAGGCAGCAATTTCTCGTGAGAATAAGTCAAGGCTTAGAGATCGAATTAAAGAGGGACTTATCGG
AACACTGAAAAGCTCAAAGGATATGATTATCCGAAAAGCAAAAGGACTAATGCTTATTTTCATAGGTATCATTATTTTAG
GGACTTTTGTGATTAACTTCGCAGGAACGGGAATGACAGGCTTTATGAACTCTACAAGCTCTGTGCTTACAACAAGCTAT
TTATCAAAGCCAAATGTCCTAAGTGAAATCAATCAGAAATTTTCAGATATGGAGGGTAAGCTTCAAAGTGAAGTTGACCA
TGTGAAAGAAAATTATCCCGGATATGATGAATATATCTTAAATAATACAGAATACATCGGTCATAATGTCCATGAGCTTT
TATCCTACATTACATCAAGGTGCGGAGAGGTAAAGAGTGTATCGGAAGTAGAATCCATATTAAAAGAATTATTTGAGTCC
ATGTATGACCTTGAGTATAGGGAAGAAATTGAAATCAGATACAGGACGGTTACAAAAACCTATACCGATGAAGATGGCAA
TGAATATACCGAAAGCCACGAAGAACCTTATGAGTATAAAAAACTCATCGTAACGCTTCATAAAAAAGAGATGGACAGTA
TTATCCGAAAGGTCTTTGCAAACTATCCCGATAATCTAAAGCACTATGAAGCCTTGTTCCTTGCACAAGGCAATATGAGA
GAAGCCTTTGGTAATTCTGACCTTATCAGTGCAAATGGAGGTATTGGCGGTGGAAAAGAGTATGAGGCATCTACGGAAGT
ACAAAAGAAGATTGTTAATGCTGCATACATTACGCCATCTCCGGGTGCAGGCTGGTGTGCCATGTGGGTATCACAGGTCT
ATCAAAATGCAGGACTTGGATATATAGGCGGGAATGCCTGTGATATGTACCGAAACTATACCTTTACATCAGACAGGTCA
AAGCTAAAAGTGGGAATGCTTGTGGCAGTTGAAAGCAGCAGTAGCGGAAGCAGTGCAGGGCTTACCTATGGTCATGTAGG
TATTTACATTGGAGATGGAAAAGTGATTGATAACATCGGTCGAATAAGAGTAACTACCTTAGATGATTGGATAGCAACAT
TTTGTAAGCACCATCCCGTAGGATTCGGTTTTCCGCCAAATGTAAAGAAATAG

Upstream 100 bases:

>100_bases
TTTCTTTGGAAATACCATTGTGCCTTTCCTTGATAAGTTTCCGAAAGATACGATTCTTTATCAGAAGATGACTACCAAGC
CGGAAGAAGTGAGGTAGCCT

Downstream 100 bases:

>100_bases
GAGGTAACAATTTGAAAAAGGAACTGATAGCAGTAAAAAACAGAATAAAAAAGTTAAAGGATAAAAAGGCTCTGATTGAT
GAAGAATTGGAGCCTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NlpC/P60 Family Protein; Helicase; Conjugative Transposon Membrane Protein; Peptidase; Conjugative Transposon Cell Wall Hydrolase; Superfamily II DNA And RNA Helicase; DNA Methyltransfarase; Conjugative Transposon DNA Recombination Protein

Number of amino acids: Translated: 710; Mature: 709

Protein sequence:

>710_residues
MGKKLKKDFKERHKASLEREMFHSKTDTIPEESKLKHNDDYRGKIVHEKERFQDKVHEKTSKVSADNEKSYGTSKRNEKY
RASDKGDVNSAIETGRSDYITEVKDGKSYDPLGKDLDNDGIIDRYDNDFRDSDYFESTYDVEDNLHHKAENTNSFSKSQK
AQKSRYKRKNYTDSLYTRKKDDVLKENKLEDKKTGKDTASKKVHSSIYKEQKKKLKKDMVKVSALSGLAKGSETVRDYLS
HGSDENQGVEAGEKTADTSSKLIHGIKNYSDKKRAKRGYDLTNKDYKIRKRKSKLEFRDAKKELKKTDEYKRASAYKRFQ
KKNQVKAAISRENKSRLRDRIKEGLIGTLKSSKDMIIRKAKGLMLIFIGIIILGTFVINFAGTGMTGFMNSTSSVLTTSY
LSKPNVLSEINQKFSDMEGKLQSEVDHVKENYPGYDEYILNNTEYIGHNVHELLSYITSRCGEVKSVSEVESILKELFES
MYDLEYREEIEIRYRTVTKTYTDEDGNEYTESHEEPYEYKKLIVTLHKKEMDSIIRKVFANYPDNLKHYEALFLAQGNMR
EAFGNSDLISANGGIGGGKEYEASTEVQKKIVNAAYITPSPGAGWCAMWVSQVYQNAGLGYIGGNACDMYRNYTFTSDRS
KLKVGMLVAVESSSSGSSAGLTYGHVGIYIGDGKVIDNIGRIRVTTLDDWIATFCKHHPVGFGFPPNVKK

Sequences:

>Translated_710_residues
MGKKLKKDFKERHKASLEREMFHSKTDTIPEESKLKHNDDYRGKIVHEKERFQDKVHEKTSKVSADNEKSYGTSKRNEKY
RASDKGDVNSAIETGRSDYITEVKDGKSYDPLGKDLDNDGIIDRYDNDFRDSDYFESTYDVEDNLHHKAENTNSFSKSQK
AQKSRYKRKNYTDSLYTRKKDDVLKENKLEDKKTGKDTASKKVHSSIYKEQKKKLKKDMVKVSALSGLAKGSETVRDYLS
HGSDENQGVEAGEKTADTSSKLIHGIKNYSDKKRAKRGYDLTNKDYKIRKRKSKLEFRDAKKELKKTDEYKRASAYKRFQ
KKNQVKAAISRENKSRLRDRIKEGLIGTLKSSKDMIIRKAKGLMLIFIGIIILGTFVINFAGTGMTGFMNSTSSVLTTSY
LSKPNVLSEINQKFSDMEGKLQSEVDHVKENYPGYDEYILNNTEYIGHNVHELLSYITSRCGEVKSVSEVESILKELFES
MYDLEYREEIEIRYRTVTKTYTDEDGNEYTESHEEPYEYKKLIVTLHKKEMDSIIRKVFANYPDNLKHYEALFLAQGNMR
EAFGNSDLISANGGIGGGKEYEASTEVQKKIVNAAYITPSPGAGWCAMWVSQVYQNAGLGYIGGNACDMYRNYTFTSDRS
KLKVGMLVAVESSSSGSSAGLTYGHVGIYIGDGKVIDNIGRIRVTTLDDWIATFCKHHPVGFGFPPNVKK
>Mature_709_residues
GKKLKKDFKERHKASLEREMFHSKTDTIPEESKLKHNDDYRGKIVHEKERFQDKVHEKTSKVSADNEKSYGTSKRNEKYR
ASDKGDVNSAIETGRSDYITEVKDGKSYDPLGKDLDNDGIIDRYDNDFRDSDYFESTYDVEDNLHHKAENTNSFSKSQKA
QKSRYKRKNYTDSLYTRKKDDVLKENKLEDKKTGKDTASKKVHSSIYKEQKKKLKKDMVKVSALSGLAKGSETVRDYLSH
GSDENQGVEAGEKTADTSSKLIHGIKNYSDKKRAKRGYDLTNKDYKIRKRKSKLEFRDAKKELKKTDEYKRASAYKRFQK
KNQVKAAISRENKSRLRDRIKEGLIGTLKSSKDMIIRKAKGLMLIFIGIIILGTFVINFAGTGMTGFMNSTSSVLTTSYL
SKPNVLSEINQKFSDMEGKLQSEVDHVKENYPGYDEYILNNTEYIGHNVHELLSYITSRCGEVKSVSEVESILKELFESM
YDLEYREEIEIRYRTVTKTYTDEDGNEYTESHEEPYEYKKLIVTLHKKEMDSIIRKVFANYPDNLKHYEALFLAQGNMRE
AFGNSDLISANGGIGGGKEYEASTEVQKKIVNAAYITPSPGAGWCAMWVSQVYQNAGLGYIGGNACDMYRNYTFTSDRSK
LKVGMLVAVESSSSGSSAGLTYGHVGIYIGDGKVIDNIGRIRVTTLDDWIATFCKHHPVGFGFPPNVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80929; Mature: 80798

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKLKKDFKERHKASLEREMFHSKTDTIPEESKLKHNDDYRGKIVHEKERFQDKVHEKT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEECHHHHHHHHHHHHH
SKVSADNEKSYGTSKRNEKYRASDKGDVNSAIETGRSDYITEVKDGKSYDPLGKDLDNDG
HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCC
IIDRYDNDFRDSDYFESTYDVEDNLHHKAENTNSFSKSQKAQKSRYKRKNYTDSLYTRKK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCH
DDVLKENKLEDKKTGKDTASKKVHSSIYKEQKKKLKKDMVKVSALSGLAKGSETVRDYLS
HHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
HGSDENQGVEAGEKTADTSSKLIHGIKNYSDKKRAKRGYDLTNKDYKIRKRKSKLEFRDA
CCCCCCCCCCCCCHHCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
KKELKKTDEYKRASAYKRFQKKNQVKAAISRENKSRLRDRIKEGLIGTLKSSKDMIIRKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KGLMLIFIGIIILGTFVINFAGTGMTGFMNSTSSVLTTSYLSKPNVLSEINQKFSDMEGK
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LQSEVDHVKENYPGYDEYILNNTEYIGHNVHELLSYITSRCGEVKSVSEVESILKELFES
HHHHHHHHHHCCCCHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
MYDLEYREEIEIRYRTVTKTYTDEDGNEYTESHEEPYEYKKLIVTLHKKEMDSIIRKVFA
HHCCCHHHHHEEEEEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NYPDNLKHYEALFLAQGNMREAFGNSDLISANGGIGGGKEYEASTEVQKKIVNAAYITPS
CCCCCHHHHHHHHHCCCCHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHEECCC
PGAGWCAMWVSQVYQNAGLGYIGGNACDMYRNYTFTSDRSKLKVGMLVAVESSSSGSSAG
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCC
LTYGHVGIYIGDGKVIDNIGRIRVTTLDDWIATFCKHHPVGFGFPPNVKK
EEECEEEEEECCCCEECCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GKKLKKDFKERHKASLEREMFHSKTDTIPEESKLKHNDDYRGKIVHEKERFQDKVHEKT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEECHHHHHHHHHHHHH
SKVSADNEKSYGTSKRNEKYRASDKGDVNSAIETGRSDYITEVKDGKSYDPLGKDLDNDG
HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCC
IIDRYDNDFRDSDYFESTYDVEDNLHHKAENTNSFSKSQKAQKSRYKRKNYTDSLYTRKK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCH
DDVLKENKLEDKKTGKDTASKKVHSSIYKEQKKKLKKDMVKVSALSGLAKGSETVRDYLS
HHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
HGSDENQGVEAGEKTADTSSKLIHGIKNYSDKKRAKRGYDLTNKDYKIRKRKSKLEFRDA
CCCCCCCCCCCCCHHCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
KKELKKTDEYKRASAYKRFQKKNQVKAAISRENKSRLRDRIKEGLIGTLKSSKDMIIRKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KGLMLIFIGIIILGTFVINFAGTGMTGFMNSTSSVLTTSYLSKPNVLSEINQKFSDMEGK
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LQSEVDHVKENYPGYDEYILNNTEYIGHNVHELLSYITSRCGEVKSVSEVESILKELFES
HHHHHHHHHHCCCCHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
MYDLEYREEIEIRYRTVTKTYTDEDGNEYTESHEEPYEYKKLIVTLHKKEMDSIIRKVFA
HHCCCHHHHHEEEEEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NYPDNLKHYEALFLAQGNMREAFGNSDLISANGGIGGGKEYEASTEVQKKIVNAAYITPS
CCCCCHHHHHHHHHCCCCHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHEECCC
PGAGWCAMWVSQVYQNAGLGYIGGNACDMYRNYTFTSDRSKLKVGMLVAVESSSSGSSAG
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCC
LTYGHVGIYIGDGKVIDNIGRIRVTTLDDWIATFCKHHPVGFGFPPNVKK
EEECEEEEEECCCCEECCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA