Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697987

Identifier: 126697987

GI number: 126697987

Start: 486717

End: 487106

Strand: Direct

Name: 126697987

Synonym: CD0417

Alternate gene names: NA

Gene position: 486717-487106 (Clockwise)

Preceding gene: 126697986

Following gene: 126697988

Centisome position: 11.34

GC content: 36.15

Gene sequence:

>390_bases
ATGGCATATGTACCAATCCCTAAAGACTTAAATAGGGTAAAGACAAAGGTTGCTTTTAACCTAACGAAAAGGCAGCTCAT
AGGCTTCACACTTGCAGGACTGGTTGGAATACCAGTCTATTTATTTATAAGGAAGTTTGTGCCAAATGACATAGCTGTCA
TATTCCTTATCGTGTCCACGCTTCCTATCTTTTTCATCACACTATTTGAAAAGGACGGACTGACCTTTGAGAAATATTTT
AAGCACATTTACCTTCATAAGTTTTATCAGCCAAAAAAGAGAGTGAGAAAGGAGGTTTACCTTGAACAAGAAAAGAAAAA
TTCAGCAAATAAAACTCATGCAAAACGAAAAGGCATTGAGAAGTCAAAAGCGGGACTTAAAGAAAAGTAA

Upstream 100 bases:

>100_bases
GAACACAGACGAACAGCTTGCGACTATTCAGGAAGAAATCGGCTCTGTATATGAACACTTTGAGGAGCTGTCAAAGGGTA
AAGAAGATGGGAGGTAAGAT

Downstream 100 bases:

>100_bases
TTGCAAGTCAAAAAAAGATAAGGGAGGAATCCTTGACCTTATCTTTAAGAAAGAACCGAAAAGATATACGGTAGAAGATA
CCATTCCCTATCTAAGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MAYVPIPKDLNRVKTKVAFNLTKRQLIGFTLAGLVGIPVYLFIRKFVPNDIAVIFLIVSTLPIFFITLFEKDGLTFEKYF
KHIYLHKFYQPKKRVRKEVYLEQEKKNSANKTHAKRKGIEKSKAGLKEK

Sequences:

>Translated_129_residues
MAYVPIPKDLNRVKTKVAFNLTKRQLIGFTLAGLVGIPVYLFIRKFVPNDIAVIFLIVSTLPIFFITLFEKDGLTFEKYF
KHIYLHKFYQPKKRVRKEVYLEQEKKNSANKTHAKRKGIEKSKAGLKEK
>Mature_128_residues
AYVPIPKDLNRVKTKVAFNLTKRQLIGFTLAGLVGIPVYLFIRKFVPNDIAVIFLIVSTLPIFFITLFEKDGLTFEKYFK
HIYLHKFYQPKKRVRKEVYLEQEKKNSANKTHAKRKGIEKSKAGLKEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15090; Mature: 14959

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYVPIPKDLNRVKTKVAFNLTKRQLIGFTLAGLVGIPVYLFIRKFVPNDIAVIFLIVST
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LPIFFITLFEKDGLTFEKYFKHIYLHKFYQPKKRVRKEVYLEQEKKNSANKTHAKRKGIE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH
KSKAGLKEK
HHHCCCCCC
>Mature Secondary Structure 
AYVPIPKDLNRVKTKVAFNLTKRQLIGFTLAGLVGIPVYLFIRKFVPNDIAVIFLIVST
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LPIFFITLFEKDGLTFEKYFKHIYLHKFYQPKKRVRKEVYLEQEKKNSANKTHAKRKGIE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH
KSKAGLKEK
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA