Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126697984

Identifier: 126697984

GI number: 126697984

Start: 485335

End: 485550

Strand: Direct

Name: 126697984

Synonym: CD0414

Alternate gene names: NA

Gene position: 485335-485550 (Clockwise)

Preceding gene: 126697983

Following gene: 126697985

Centisome position: 11.31

GC content: 43.06

Gene sequence:

>216_bases
ATGGCATTTTTTACACAGGCAGTTAATGTATTAAAGATTTTGGTTATGGCAGTAGGTGCAGGACTTGGAGCATGGGGCGT
TATCAACTTGATGGAAGGATATGGTAATGACAATCCCGGTGCTAAGAGCCAGGGTATTAAGCAGCTTATGGCTGGAGGAG
GGATCGTTCTTATCGGACTTAAGCTCATTCCACTACTTGCCAATGTACTCAATTAA

Upstream 100 bases:

>100_bases
CTTTAAGAAGCGTGAAAAAGAGGGAAAGACTTACAAAAACTTTGTAGTGAAGTCCTACAACAAAATTGAAAAGAAAGAAG
AAAATGAGGAGGAATAACTT

Downstream 100 bases:

>100_bases
GAAGAAAGGAGAGCTTAGATGTTTGGAATATTCGACAAGATAGAAGAATTCTTTAAGGAGCTTCTACTGGGCGGTATCCA
AGCAAACTTAGAGTCCATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MAFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGLKLIPLLANVLN

Sequences:

>Translated_71_residues
MAFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGLKLIPLLANVLN
>Mature_70_residues
AFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGLKLIPLLANVLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7266; Mature: 7135

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGL
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHH
KLIPLLANVLN
HHHHHHHHHHC
>Mature Secondary Structure 
AFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGL
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHH
KLIPLLANVLN
HHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA