Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697866

Identifier: 126697866

GI number: 126697866

Start: 355267

End: 356025

Strand: Direct

Name: 126697866

Synonym: CD0294

Alternate gene names: NA

Gene position: 355267-356025 (Clockwise)

Preceding gene: 126697865

Following gene: 126697867

Centisome position: 8.28

GC content: 27.67

Gene sequence:

>759_bases
GTGAGAGAATACATAGCATTTACAAAAAAAGAATTTAAAGAGAATTTAAGAAATTATAAATTATTTAGTTTAATTATTTT
ATTTCTAATATTTGGTATAAGTAGTCCTATTTCTGCAAAATTTATGCCAGACTTGATTGCTCATTTTGCACCGACTTTAA
AAGTTACTGCTGCACCAACTGCTTTAGATTCTTGGACACAATTTTTTAGCAATATCTCTGGTCTTGGTATGAGTTTAACT
CTAATTATTTTTTGTAATATTTTATCAAATGAATATTCTAAAGGGACACTTGTTATTATGCTGACTAAAGGTTTATCACG
TTCATCTATAGTATTGTCTAAATTCTCTGTTACGGTGATTATTATGACAATTGGTTTTTGGTTGAGTTTTTTATTTGCTT
ATGGCTATACAATGTATTTTTGGCCAACTGCAAATCTTAATCATATTATATTTTCAGCATTTAATTTATGGCTTATAGGA
ATTATGTATATTAGTGTATTAATTCTTGGGTGTGTACTATTTAGACCAGCATTTGCCAGTGTTTTACTTGTATTGGTGGC
AACTCTTTTATTGAGTTTAATTTCTATTCCTAAACAGATTGCACCTTATACTCCTAATTTCTTGATGTCAAAAAATATAG
ACTTGATTTCAGGGAAAGTGGCAATGCCAGAATTTATTATTCCAATTATTATAACAGTTCTTATTTCTATAGTATGTTTA
CTAGCAGCTGTTATTTTATTTAATAAAAAACCAGTTTAA

Upstream 100 bases:

>100_bases
AAAAAACAGTTATATCTACACTCGCAGAAATGAATCTTTGTCCAGTAAAGATGGAACTAATAGAATTATCACTTGAAAAT
TTATTTTTGGAGGTAGTAAA

Downstream 100 bases:

>100_bases
TAATACCTTTATCACAAGGTAAAGTAATCTTATGTTGTTAAAAACTACACCTAAAAATCAAAAAGACTTGGACTTAAGTT
TCAAGTCTTTTTGATTTTTA

Product: ABC transporter permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MREYIAFTKKEFKENLRNYKLFSLIILFLIFGISSPISAKFMPDLIAHFAPTLKVTAAPTALDSWTQFFSNISGLGMSLT
LIIFCNILSNEYSKGTLVIMLTKGLSRSSIVLSKFSVTVIIMTIGFWLSFLFAYGYTMYFWPTANLNHIIFSAFNLWLIG
IMYISVLILGCVLFRPAFASVLLVLVATLLLSLISIPKQIAPYTPNFLMSKNIDLISGKVAMPEFIIPIIITVLISIVCL
LAAVILFNKKPV

Sequences:

>Translated_252_residues
MREYIAFTKKEFKENLRNYKLFSLIILFLIFGISSPISAKFMPDLIAHFAPTLKVTAAPTALDSWTQFFSNISGLGMSLT
LIIFCNILSNEYSKGTLVIMLTKGLSRSSIVLSKFSVTVIIMTIGFWLSFLFAYGYTMYFWPTANLNHIIFSAFNLWLIG
IMYISVLILGCVLFRPAFASVLLVLVATLLLSLISIPKQIAPYTPNFLMSKNIDLISGKVAMPEFIIPIIITVLISIVCL
LAAVILFNKKPV
>Mature_252_residues
MREYIAFTKKEFKENLRNYKLFSLIILFLIFGISSPISAKFMPDLIAHFAPTLKVTAAPTALDSWTQFFSNISGLGMSLT
LIIFCNILSNEYSKGTLVIMLTKGLSRSSIVLSKFSVTVIIMTIGFWLSFLFAYGYTMYFWPTANLNHIIFSAFNLWLIG
IMYISVLILGCVLFRPAFASVLLVLVATLLLSLISIPKQIAPYTPNFLMSKNIDLISGKVAMPEFIIPIIITVLISIVCL
LAAVILFNKKPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28178; Mature: 28178

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREYIAFTKKEFKENLRNYKLFSLIILFLIFGISSPISAKFMPDLIAHFAPTLKVTAAPT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEECCCH
ALDSWTQFFSNISGLGMSLTLIIFCNILSNEYSKGTLVIMLTKGLSRSSIVLSKFSVTVI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
IMTIGFWLSFLFAYGYTMYFWPTANLNHIIFSAFNLWLIGIMYISVLILGCVLFRPAFAS
HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLVLVATLLLSLISIPKQIAPYTPNFLMSKNIDLISGKVAMPEFIIPIIITVLISIVCL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
LAAVILFNKKPV
HHHHHHHCCCCC
>Mature Secondary Structure
MREYIAFTKKEFKENLRNYKLFSLIILFLIFGISSPISAKFMPDLIAHFAPTLKVTAAPT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEECCCH
ALDSWTQFFSNISGLGMSLTLIIFCNILSNEYSKGTLVIMLTKGLSRSSIVLSKFSVTVI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
IMTIGFWLSFLFAYGYTMYFWPTANLNHIIFSAFNLWLIGIMYISVLILGCVLFRPAFAS
HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLVLVATLLLSLISIPKQIAPYTPNFLMSKNIDLISGKVAMPEFIIPIIITVLISIVCL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
LAAVILFNKKPV
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA