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The map label for this gene is ytjP [H]

Identifier: 126697863

GI number: 126697863

Start: 350785

End: 352092

Strand: Direct

Name: ytjP [H]

Synonym: CD0291

Alternate gene names: 126697863

Gene position: 350785-352092 (Clockwise)

Preceding gene: 126697862

Following gene: 126697864

Centisome position: 8.18

GC content: 29.97

Gene sequence:

>1308_bases
ATGGATATAAGCAGAAGTGTAGATAATAGTTTAAATAGAACCATAGAATTTCTAAAAGAATTGATAAAAATTGATTCACA
ACAAGGTGAACCTATTTCACAATGTCCTTTTGGTATAGGACCTAAAAAATCTTTAGATAAAACTTTAGATTACTGTGCTA
GTTTAGGTTTTAGTGTTAAAAATATTGATAATTATATTGGATATGCAGAAATTGGAGAGGGAGAGGAATTAATAGGGATT
CCAATGCATTTAGATATAGTTCCACCAGGAGAGGGGTGGAGTGTAGACCCATTTTCGGGAGCAGTAATTGACAATATTAT
TTATGGAAGAGGTGTCATAGATAATAAGGGTGCTGTATCTATGCTTATACATGTATTGAAAAACATAGAGGATATGTATC
CTACAATTAATAAAAGAATAAGATTAATTTTTGGTACAAATGAGGAGACAGGTATGAAATGTATCAAATATTACTTAGAT
AAAGGTGAAGAAATTCCAAGTATGGGATTTACTCCAGATGCTATGTATCCAGTGGTTAATGGAGAAAAAGGAAGGGTTCA
TATAAGGATAGAAAAAGAAATTAAAATTGACAAAAGTAAACCTTACATAATAGTAAGTGGAGGAACTAAAGAAAATGTTG
TTCCATCTCATTGTACTGCAAAAATTATTAATGGAATTATTTCAGAGTTAACTACTAAAGGAGTAGCTGTACATGCAAGT
AATCCTGAAAAGGGAGAAAATGCTATATCTAAAATGGTAATAAAGATAGTTGAGGATAATATGGATTTTCAGCATAGAGA
AGATATAGAATTAGTTTCAAAATACCTTTGTAGTGATTATTATGGAGATGCATTGGGGATTAATCAATATGATGAGGTAT
TCAAAAACACTACCTTAAATTTAGGAATATTAAAAGTAAATGAGGAAAAAATCGTATGTGAGTTAGATATAAGGTATGGT
AAAAATATAGTTTTAAACAATATAATAGATAGATTCAAAAAGGTTTTTTGTAATGGTTGGAAAATAGAGGTTATTGCTCA
TAAAGACTTACATTATGTGGATGAGAGTAATTTAGTACTTAAAAAATTATTAGAAGCCTATGAAGAAGTAACAGATGAAA
ATGGATATACAATTGCTATGGGTGGTGGCACATATGCAAGTTGGTTTAAAGATATGGTGGCGTTTGGACCTAAGTTCTTA
GCGTATAAAACTGGTGGTCATGGAGTAGATGAAAGAGTACCAATAAATCATATACGAAAGAATATGGAGATATATACTTT
GGCTTTAATAAAATTATTAGAATTGTAA

Upstream 100 bases:

>100_bases
GATGAAGTTTGTGAATTAGTATTTACAAAAAAATAATTTTTAATGCTAAAAGCCTGTTCTTTAAGGACAGGCTTTAAAAA
GATAGAAAGTAGGTTGATTT

Downstream 100 bases:

>100_bases
AAGAAGAAGAGACTTTATGTGCAAATTTACGGATATCTTAAAAAGAGAGATAAAACGAGTTCAACCTTATTTAAATGTTC
AACACCATCAAATGGGGCTG

Product: peptidase

Products: succinate; LL-2,6-diaminoheptanedioate

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MDISRSVDNSLNRTIEFLKELIKIDSQQGEPISQCPFGIGPKKSLDKTLDYCASLGFSVKNIDNYIGYAEIGEGEELIGI
PMHLDIVPPGEGWSVDPFSGAVIDNIIYGRGVIDNKGAVSMLIHVLKNIEDMYPTINKRIRLIFGTNEETGMKCIKYYLD
KGEEIPSMGFTPDAMYPVVNGEKGRVHIRIEKEIKIDKSKPYIIVSGGTKENVVPSHCTAKIINGIISELTTKGVAVHAS
NPEKGENAISKMVIKIVEDNMDFQHREDIELVSKYLCSDYYGDALGINQYDEVFKNTTLNLGILKVNEEKIVCELDIRYG
KNIVLNNIIDRFKKVFCNGWKIEVIAHKDLHYVDESNLVLKKLLEAYEEVTDENGYTIAMGGGTYASWFKDMVAFGPKFL
AYKTGGHGVDERVPINHIRKNMEIYTLALIKLLEL

Sequences:

>Translated_435_residues
MDISRSVDNSLNRTIEFLKELIKIDSQQGEPISQCPFGIGPKKSLDKTLDYCASLGFSVKNIDNYIGYAEIGEGEELIGI
PMHLDIVPPGEGWSVDPFSGAVIDNIIYGRGVIDNKGAVSMLIHVLKNIEDMYPTINKRIRLIFGTNEETGMKCIKYYLD
KGEEIPSMGFTPDAMYPVVNGEKGRVHIRIEKEIKIDKSKPYIIVSGGTKENVVPSHCTAKIINGIISELTTKGVAVHAS
NPEKGENAISKMVIKIVEDNMDFQHREDIELVSKYLCSDYYGDALGINQYDEVFKNTTLNLGILKVNEEKIVCELDIRYG
KNIVLNNIIDRFKKVFCNGWKIEVIAHKDLHYVDESNLVLKKLLEAYEEVTDENGYTIAMGGGTYASWFKDMVAFGPKFL
AYKTGGHGVDERVPINHIRKNMEIYTLALIKLLEL
>Mature_435_residues
MDISRSVDNSLNRTIEFLKELIKIDSQQGEPISQCPFGIGPKKSLDKTLDYCASLGFSVKNIDNYIGYAEIGEGEELIGI
PMHLDIVPPGEGWSVDPFSGAVIDNIIYGRGVIDNKGAVSMLIHVLKNIEDMYPTINKRIRLIFGTNEETGMKCIKYYLD
KGEEIPSMGFTPDAMYPVVNGEKGRVHIRIEKEIKIDKSKPYIIVSGGTKENVVPSHCTAKIINGIISELTTKGVAVHAS
NPEKGENAISKMVIKIVEDNMDFQHREDIELVSKYLCSDYYGDALGINQYDEVFKNTTLNLGILKVNEEKIVCELDIRYG
KNIVLNNIIDRFKKVFCNGWKIEVIAHKDLHYVDESNLVLKKLLEAYEEVTDENGYTIAMGGGTYASWFKDMVAFGPKFL
AYKTGGHGVDERVPINHIRKNMEIYTLALIKLLEL

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1789236, Length=244, Percent_Identity=24.5901639344262, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010964
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.5.1.18

Molecular weight: Translated: 48802; Mature: 48802

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISRSVDNSLNRTIEFLKELIKIDSQQGEPISQCPFGIGPKKSLDKTLDYCASLGFSVK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCHH
NIDNYIGYAEIGEGEELIGIPMHLDIVPPGEGWSVDPFSGAVIDNIIYGRGVIDNKGAVS
HHHHHCCEEECCCCCCEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH
MLIHVLKNIEDMYPTINKRIRLIFGTNEETGMKCIKYYLDKGEEIPSMGFTPDAMYPVVN
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC
GEKGRVHIRIEKEIKIDKSKPYIIVSGGTKENVVPSHCTAKIINGIISELTTKGVAVHAS
CCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECC
NPEKGENAISKMVIKIVEDNMDFQHREDIELVSKYLCSDYYGDALGINQYDEVFKNTTLN
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEE
LGILKVNEEKIVCELDIRYGKNIVLNNIIDRFKKVFCNGWKIEVIAHKDLHYVDESNLVL
EEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCEEECCCCHHH
KKLLEAYEEVTDENGYTIAMGGGTYASWFKDMVAFGPKFLAYKTGGHGVDERVPINHIRK
HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHC
NMEIYTLALIKLLEL
CCHHHHHHHHHHHCC
>Mature Secondary Structure
MDISRSVDNSLNRTIEFLKELIKIDSQQGEPISQCPFGIGPKKSLDKTLDYCASLGFSVK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCHH
NIDNYIGYAEIGEGEELIGIPMHLDIVPPGEGWSVDPFSGAVIDNIIYGRGVIDNKGAVS
HHHHHCCEEECCCCCCEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH
MLIHVLKNIEDMYPTINKRIRLIFGTNEETGMKCIKYYLDKGEEIPSMGFTPDAMYPVVN
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC
GEKGRVHIRIEKEIKIDKSKPYIIVSGGTKENVVPSHCTAKIINGIISELTTKGVAVHAS
CCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECC
NPEKGENAISKMVIKIVEDNMDFQHREDIELVSKYLCSDYYGDALGINQYDEVFKNTTLN
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEE
LGILKVNEEKIVCELDIRYGKNIVLNNIIDRFKKVFCNGWKIEVIAHKDLHYVDESNLVL
EEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCEEECCCCHHH
KKLLEAYEEVTDENGYTIAMGGGTYASWFKDMVAFGPKFLAYKTGGHGVDERVPINHIRK
HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHC
NMEIYTLALIKLLEL
CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-succinyl-LL-2,6-diaminoheptanedioate; H2O

Specific reaction: N-succinyl-LL-2,6-diaminoheptanedioate + H2O = succinate + LL-2,6-diaminoheptanedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]