Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697839

Identifier: 126697839

GI number: 126697839

Start: 328398

End: 328820

Strand: Direct

Name: 126697839

Synonym: CD0267

Alternate gene names: NA

Gene position: 328398-328820 (Clockwise)

Preceding gene: 126697838

Following gene: 126697840

Centisome position: 7.65

GC content: 23.88

Gene sequence:

>423_bases
ATGATACAAATTATATTAATAGTAGTGTCTATTTTAATAATAGTAACTATAGTTATAAATTTACATAAGGAATCAAAAAA
TAAAGATAACAGATACTTTGATAAAATATTTGAGCAAGAATATGAAGCAAATGATAGATTAATAATTGCAGAAAAAAGAA
GATTCTTTTTAGACAAAGTACTTGCAGAAAAAAGAAGTAATAGTCATATAAAAGTTTATGAAAATTATAACCTAATAAAG
GCTAATGAAGAAAGAAAGGAAAACATATTTATAGAATCAAAAAAGGAAGTAAGACAAGAAAATGAGTTATCTCTTAAAGT
GAAACATCTTATAAGTTCAGGTTATGATGATGTGGAAATATGTAAGATGCTAGATATTGGAAAGGGGGAACTGTTATTAA
TAAGGAGTTGTTACAAAATATAA

Upstream 100 bases:

>100_bases
TTCAGAATCAAGAGTTTCACAACTCCACAGAAAATCAATAAGAAACTTAAGAAACAAGATAAAAGAACTTAAATATTCTA
TATAGATGGTGATTGATAAG

Downstream 100 bases:

>100_bases
GGATATTATTATGTGATAAAAAAGTATTCTTAGGAATAGGTATTGGTATATTAATATCAACTTTATGTATAATGCTTTTT
AGTAATAATGATATGAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MIQIILIVVSILIIVTIVINLHKESKNKDNRYFDKIFEQEYEANDRLIIAEKRRFFLDKVLAEKRSNSHIKVYENYNLIK
ANEERKENIFIESKKEVRQENELSLKVKHLISSGYDDVEICKMLDIGKGELLLIRSCYKI

Sequences:

>Translated_140_residues
MIQIILIVVSILIIVTIVINLHKESKNKDNRYFDKIFEQEYEANDRLIIAEKRRFFLDKVLAEKRSNSHIKVYENYNLIK
ANEERKENIFIESKKEVRQENELSLKVKHLISSGYDDVEICKMLDIGKGELLLIRSCYKI
>Mature_140_residues
MIQIILIVVSILIIVTIVINLHKESKNKDNRYFDKIFEQEYEANDRLIIAEKRRFFLDKVLAEKRSNSHIKVYENYNLIK
ANEERKENIFIESKKEVRQENELSLKVKHLISSGYDDVEICKMLDIGKGELLLIRSCYKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16632; Mature: 16632

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQIILIVVSILIIVTIVINLHKESKNKDNRYFDKIFEQEYEANDRLIIAEKRRFFLDKV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
LAEKRSNSHIKVYENYNLIKANEERKENIFIESKKEVRQENELSLKVKHLISSGYDDVEI
HHHHCCCCCEEEEECCCEEECCCCHHHCEEEECHHHHCCHHHHHHHHHHHHHCCCCHHHH
CKMLDIGKGELLLIRSCYKI
HHHHCCCCCCEEEEECHHCC
>Mature Secondary Structure
MIQIILIVVSILIIVTIVINLHKESKNKDNRYFDKIFEQEYEANDRLIIAEKRRFFLDKV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
LAEKRSNSHIKVYENYNLIKANEERKENIFIESKKEVRQENELSLKVKHLISSGYDDVEI
HHHHCCCCCEEEEECCCEEECCCCHHHCEEEECHHHHCCHHHHHHHHHHHHHCCCCHHHH
CKMLDIGKGELLLIRSCYKI
HHHHCCCCCCEEEEECHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA