Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is fliL

Identifier: 126697830

GI number: 126697830

Start: 320111

End: 320554

Strand: Direct

Name: fliL

Synonym: CD0258

Alternate gene names: NA

Gene position: 320111-320554 (Clockwise)

Preceding gene: 126697829

Following gene: 126697831

Centisome position: 7.46

GC content: 25.68

Gene sequence:

>444_bases
TTGTTCAAAAATAAAAAAATTATTATAATTATTTTGATACTGATTATTTTCTCAGCGGGAGCAGGTTTTTTTATATTAGG
AGAAGGTGGAAATAAACAAGTTGACAAGATTGCAGGTTTGTTTATTCCAACAGGAAAAGGTAAAGATGAAGTAAAGACCG
AAAATCTTGACTTAGAAGAGATGGTATTAAAGCTAGCTGATGAAGGTGTAAGATATTTAAAAGTATCAATAACTGTATCT
TATGATTCTTCATATAAAGATATAGAAAAAAATACGCCTTTAATTAGGGATAATATTATAAATTGTTTTATGGCAAAAAG
GGCAGATGATTTTACTGCTGATAATTTAAAGAACATAAAAGAAGAAATTAAAAATACATTAAATATACAACTAGGTGAAA
ATGTAATTCAAAATATATATTTCACAAATATAGTAGTGCAATAA

Upstream 100 bases:

>100_bases
GTGGAGAGTATCAACCTTTGGTTTCAAATGAAACAGCAAAGGGAAGGGCTGAGAATAGAAGAGTTAATATACTTATAACT
ATTGACTAGGAGGAAGAGGT

Downstream 100 bases:

>100_bases
AAGGATGGTAAGACATGATACTTTATTTACTAAAAATATTAATATGTATCCCAATAATTTTAATATTGATAGTCTTATCT
TTAAAAATTAGCCAAGGAAC

Product: flagellar basal body-associated protein

Products: NA

Alternate protein names: Flagellar Basal Body-Associated Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MFKNKKIIIIILILIIFSAGAGFFILGEGGNKQVDKIAGLFIPTGKGKDEVKTENLDLEEMVLKLADEGVRYLKVSITVS
YDSSYKDIEKNTPLIRDNIINCFMAKRADDFTADNLKNIKEEIKNTLNIQLGENVIQNIYFTNIVVQ

Sequences:

>Translated_147_residues
MFKNKKIIIIILILIIFSAGAGFFILGEGGNKQVDKIAGLFIPTGKGKDEVKTENLDLEEMVLKLADEGVRYLKVSITVS
YDSSYKDIEKNTPLIRDNIINCFMAKRADDFTADNLKNIKEEIKNTLNIQLGENVIQNIYFTNIVVQ
>Mature_147_residues
MFKNKKIIIIILILIIFSAGAGFFILGEGGNKQVDKIAGLFIPTGKGKDEVKTENLDLEEMVLKLADEGVRYLKVSITVS
YDSSYKDIEKNTPLIRDNIINCFMAKRADDFTADNLKNIKEEIKNTLNIQLGENVIQNIYFTNIVVQ

Specific function: Unknown

COG id: COG1580

COG function: function code N; Flagellar basal body-associated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16561; Mature: 16561

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKNKKIIIIILILIIFSAGAGFFILGEGGNKQVDKIAGLFIPTGKGKDEVKTENLDLEE
CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHEEEEECCCCCCCCCCCCCCHHH
MVLKLADEGVRYLKVSITVSYDSSYKDIEKNTPLIRDNIINCFMAKRADDFTADNLKNIK
HHHHHHHCCCEEEEEEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
EEIKNTLNIQLGENVIQNIYFTNIVVQ
HHHHHHCCEEECHHHHHHHHHHHEEEC
>Mature Secondary Structure
MFKNKKIIIIILILIIFSAGAGFFILGEGGNKQVDKIAGLFIPTGKGKDEVKTENLDLEE
CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHEEEEECCCCCCCCCCCCCCHHH
MVLKLADEGVRYLKVSITVSYDSSYKDIEKNTPLIRDNIINCFMAKRADDFTADNLKNIK
HHHHHHHCCCEEEEEEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
EEIKNTLNIQLGENVIQNIYFTNIVVQ
HHHHHHCCEEECHHHHHHHHHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA