Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697753

Identifier: 126697753

GI number: 126697753

Start: 238355

End: 238858

Strand: Direct

Name: 126697753

Synonym: CD0180

Alternate gene names: NA

Gene position: 238355-238858 (Clockwise)

Preceding gene: 126697752

Following gene: 126697754

Centisome position: 5.56

GC content: 25.6

Gene sequence:

>504_bases
ATGGAAAAATATATGGATTTGGATTGTGAATTTTATTGTGATGAGAGAGTTTTAAAAAATTGTACTGTACAACAAAAGCA
AGAATATGCTCTAACTATTGTAAATTCAATGAAAAGAGGTACAAATTTTTCAAATAAATTTGTAGCTGGATTAAATAAAC
AATCTGATATTAGAAAAAGAGTAATAAACATGTTCAGTGAAAAATATAAAAATGGTATCTTAATGGCTTTGATTATAAGC
TTGTTTTCTTCTATTACATTTTTTAAATTCGATTCAACTAGTATTATTGAAGAGAATGATTTCTTAGAGAGGTTAAGATA
TACGTTTGAAGGAAGGCAAGAAGATATGTTTGTAACAATAGATTTTACATATGCAGATGCACCTATAAAACTTAGAAAAG
AGCATGAAGAAAACTGTAGAGTCAATGGAATAGTACCAAAAGATTCAGATTCAATAGAAATTATTCCTAGATTTTATAAA
GATTGTATGGATTTAAAAAAATAA

Upstream 100 bases:

>100_bases
TTTAGACATGAACTTATGCATTTTAAAAGCAAAGACTTTCATTTAAAGTATCTAGTATTATTTTTAAAAATAGTATATTG
GTTTAATCCATTTATATATA

Downstream 100 bases:

>100_bases
GTTAGACTTAATATTGATGTTGATATTATGAATTTTTTATATTTAAGCAATTGAAAATTTTATTATAGATTCAATTTTAT
ATGTGTTTAAGTATGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-Lactamase Inducer

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MEKYMDLDCEFYCDERVLKNCTVQQKQEYALTIVNSMKRGTNFSNKFVAGLNKQSDIRKRVINMFSEKYKNGILMALIIS
LFSSITFFKFDSTSIIEENDFLERLRYTFEGRQEDMFVTIDFTYADAPIKLRKEHEENCRVNGIVPKDSDSIEIIPRFYK
DCMDLKK

Sequences:

>Translated_167_residues
MEKYMDLDCEFYCDERVLKNCTVQQKQEYALTIVNSMKRGTNFSNKFVAGLNKQSDIRKRVINMFSEKYKNGILMALIIS
LFSSITFFKFDSTSIIEENDFLERLRYTFEGRQEDMFVTIDFTYADAPIKLRKEHEENCRVNGIVPKDSDSIEIIPRFYK
DCMDLKK
>Mature_167_residues
MEKYMDLDCEFYCDERVLKNCTVQQKQEYALTIVNSMKRGTNFSNKFVAGLNKQSDIRKRVINMFSEKYKNGILMALIIS
LFSSITFFKFDSTSIIEENDFLERLRYTFEGRQEDMFVTIDFTYADAPIKLRKEHEENCRVNGIVPKDSDSIEIIPRFYK
DCMDLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19777; Mature: 19777

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYMDLDCEFYCDERVLKNCTVQQKQEYALTIVNSMKRGTNFSNKFVAGLNKQSDIRKR
CCCCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH
VINMFSEKYKNGILMALIISLFSSITFFKFDSTSIIEENDFLERLRYTFEGRQEDMFVTI
HHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEE
DFTYADAPIKLRKEHEENCRVNGIVPKDSDSIEIIPRFYKDCMDLKK
EEEECCCCHHHHCCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MEKYMDLDCEFYCDERVLKNCTVQQKQEYALTIVNSMKRGTNFSNKFVAGLNKQSDIRKR
CCCCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH
VINMFSEKYKNGILMALIISLFSSITFFKFDSTSIIEENDFLERLRYTFEGRQEDMFVTI
HHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEE
DFTYADAPIKLRKEHEENCRVNGIVPKDSDSIEIIPRFYKDCMDLKK
EEEECCCCHHHHCCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA