| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126697751
Identifier: 126697751
GI number: 126697751
Start: 235839
End: 236663
Strand: Direct
Name: 126697751
Synonym: CD0178
Alternate gene names: NA
Gene position: 235839-236663 (Clockwise)
Preceding gene: 126697749
Following gene: 126697752
Centisome position: 5.5
GC content: 26.3
Gene sequence:
>825_bases ATGGAAGTATATGCTTTGGTTGGGTCAAGTGGCACAGGGAAGAGCTTTAAGGCTTTAGAGTTCGCATATGAAAATGATAT AGAATATATAATTGATGATGGGATTTTAATATACAAAAACAAGGTTTTAGCTGGGATATCGGCAAAACAAGCAAATACTA CTATAGAAGCAGTTAAAAGGGCTATTTTTTATAATCTGGAGCATAGACAAGAAGTTAGAGAAGCAATTAAAAAAGAAAAT ATAAGAAAAATTCTTATTATTGGGACATCAAAAAAAATGGTTAATCAAATTGTAGAGAGATTGTCAATTGGAAGGGTTTG CAAGTTTATAAATATACAAGATATAAGTACTAAATATGAAATAGAAATAGCAAAACAAGCTAGAAAAGAAGGAAATCATG TAATTCCTGTTCCAGCAGTTGAGATAAAAAGTATGGCAAGTGGTCTTAGTATAAATTCTTTGAAGAGACTTTTTAGAAAA GGAAATAATAGGAATATGGTAGTTTTAGAAAAAACAATTATAAGACCAACTTTTAGTTATATAGGAAAGTTTTATATTAG TGCTGATGTAATTAAACAGATTATTGAATATGAAGTATACAACTTTGGAAGCATTGATAGAATAAATAAAATCAATATAG AGAATTGCAATAATTTTATGAATATTTTTGTAAGTATAAATATCAATGATTTAGAAACTATAAAAAAAATTGAAGACATA CAGCAGACAATAAAAAAGTCTATTGAGAAAATGACTTTAGTTAATGTACAAAAAATAGATATTAACATTCATAAAATTAA AAAAATAAACTTCCTCCAATGTTAA
Upstream 100 bases:
>100_bases GGATATAATATTAAACTGTTAATGATATAATAAATTTAATCTATAAAGTAAATAAAATTTTGTAATAAATAGTTAAAGCT ATTTTATAAGGAGATATATG
Downstream 100 bases:
>100_bases AAAATAAACTGAGAAAATGATATACTAATTTGCAATAAAGTGTGCTATAATTAAACTGTAAATTTAGGAAATGGTTTTTT CTAAATGGAGTATACATAAT
Product: ATP-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MEVYALVGSSGTGKSFKALEFAYENDIEYIIDDGILIYKNKVLAGISAKQANTTIEAVKRAIFYNLEHRQEVREAIKKEN IRKILIIGTSKKMVNQIVERLSIGRVCKFINIQDISTKYEIEIAKQARKEGNHVIPVPAVEIKSMASGLSINSLKRLFRK GNNRNMVVLEKTIIRPTFSYIGKFYISADVIKQIIEYEVYNFGSIDRINKINIENCNNFMNIFVSININDLETIKKIEDI QQTIKKSIEKMTLVNVQKIDINIHKIKKINFLQC
Sequences:
>Translated_274_residues MEVYALVGSSGTGKSFKALEFAYENDIEYIIDDGILIYKNKVLAGISAKQANTTIEAVKRAIFYNLEHRQEVREAIKKEN IRKILIIGTSKKMVNQIVERLSIGRVCKFINIQDISTKYEIEIAKQARKEGNHVIPVPAVEIKSMASGLSINSLKRLFRK GNNRNMVVLEKTIIRPTFSYIGKFYISADVIKQIIEYEVYNFGSIDRINKINIENCNNFMNIFVSININDLETIKKIEDI QQTIKKSIEKMTLVNVQKIDINIHKIKKINFLQC >Mature_274_residues MEVYALVGSSGTGKSFKALEFAYENDIEYIIDDGILIYKNKVLAGISAKQANTTIEAVKRAIFYNLEHRQEVREAIKKEN IRKILIIGTSKKMVNQIVERLSIGRVCKFINIQDISTKYEIEIAKQARKEGNHVIPVPAVEIKSMASGLSINSLKRLFRK GNNRNMVVLEKTIIRPTFSYIGKFYISADVIKQIIEYEVYNFGSIDRINKINIENCNNFMNIFVSININDLETIKKIEDI QQTIKKSIEKMTLVNVQKIDINIHKIKKINFLQC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31454; Mature: 31454
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVYALVGSSGTGKSFKALEFAYENDIEYIIDDGILIYKNKVLAGISAKQANTTIEAVKR CEEEEEECCCCCCCCHHHEEEHHHCCCEEEEECCEEEEECCEEECCCCHHCCHHHHHHHH AIFYNLEHRQEVREAIKKENIRKILIIGTSKKMVNQIVERLSIGRVCKFINIQDISTKYE HHHHCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHEEEEEECCCEEE IEIAKQARKEGNHVIPVPAVEIKSMASGLSINSLKRLFRKGNNRNMVVLEKTIIRPTFSY EHHHHHHHHCCCEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHH IGKFYISADVIKQIIEYEVYNFGSIDRINKINIENCNNFMNIFVSININDLETIKKIEDI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHCCCCEEEEEEEEECCHHHHHHHHHHH QQTIKKSIEKMTLVNVQKIDINIHKIKKINFLQC HHHHHHHHHHHHHEEEEEEEEEEEEEECCCCCCC >Mature Secondary Structure MEVYALVGSSGTGKSFKALEFAYENDIEYIIDDGILIYKNKVLAGISAKQANTTIEAVKR CEEEEEECCCCCCCCHHHEEEHHHCCCEEEEECCEEEEECCEEECCCCHHCCHHHHHHHH AIFYNLEHRQEVREAIKKENIRKILIIGTSKKMVNQIVERLSIGRVCKFINIQDISTKYE HHHHCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHEEEEEECCCEEE IEIAKQARKEGNHVIPVPAVEIKSMASGLSINSLKRLFRKGNNRNMVVLEKTIIRPTFSY EHHHHHHHHCCCEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHH IGKFYISADVIKQIIEYEVYNFGSIDRINKINIENCNNFMNIFVSININDLETIKKIEDI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHCCCCEEEEEEEEECCHHHHHHHHHHH QQTIKKSIEKMTLVNVQKIDINIHKIKKINFLQC HHHHHHHHHHHHHEEEEEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA