| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126697733
Identifier: 126697733
GI number: 126697733
Start: 215304
End: 216374
Strand: Direct
Name: 126697733
Synonym: CD0163
Alternate gene names: NA
Gene position: 215304-216374 (Clockwise)
Preceding gene: 126697732
Following gene: 126697734
Centisome position: 5.02
GC content: 24.74
Gene sequence:
>1071_bases ATGGAAAAAGTACTTATATATCCATTTAATTATAATTTTTTTACTATTTTAAATCATTGCAATAAAATTTCAGATATAGA AATTAATTCACTGGTTAGTCCTTCTGGCTGGGGGTTATGCAATAAGGAGTATAATGTTAATAATATTATTACTAAAGTTA CAAATGATTTTCAAAGTGAACTTAAAAAGAATTCTTTGGTATGGTTTGTTGATTCAAAAGAAAATCTAGACTTAGAAAAA TTTATAATTCCTAAATTAAAAGTAGCTCTAAAAGAAGGTAAAAAGATATTATATACACGTGATGATCTTAATAAAATATC TAGGTATATATCTCATTATGAATTCAAAAAGATTAATGAATGGAATTTAGAAAAATATGAAATAAGAGATATAGAGGGTA TATCACAGATAAACACACCAATAATATTTATTTGTGGTCTTTATGGAGGGTTAGATACTTTTGATGTAAATATAAGGATA GGAGAAGAACTAAGAAAAAGGGGGTTTTCAATATTACAATTTGGCCCTAAAAAAGAGAGCTATTTATTTAAAATGATTCC TATACCAGAGTTTATGTTTGATGATTCGATAAGTAGTAAGACAAAGATTATTAATTTTAACCATTTTATAAAAGATAAAG AGGTAGAGGCAAAGCCAGATTTAATAATTATAGAAGTTCCAGGAGAATTATTCCCTTTCTCTAGAAAAATGGTTGGTAAT TTTGGAATTAGAGCTTTTGAAATTTCTAATGCAGTAATAAATGATTGTGGTATATTATGTATTCCATCAAGTATATATGA TAGAGAATATTGTGAAGAACTTAAATATTTTATTAAAGGAAGACATGGTATAAATATAGACTATTTTAGTATAGAGAAAA AAGTTATAGATACATATGAGACAGAGGTGAAGCAAAAATTTTCATATATGTCATTAGATGAAAACTTTTTTGTTGAAGAT ATAGAAGATTATGAAAAAACATTTTTTATACATGATAATAAACAATTACTAGAATTAGTGGACAATATAGTGAATCAATT AAAAGAGTATGCTAAAGTAATATCTATTTAG
Upstream 100 bases:
>100_bases AGAATTAGACATTCTACAGAAAATAATATGAAAGATTACTGCGTTTTGAAATCTCTAGGATATCAATATTAAATTTTCTA ATGAAAGGAAAGATGGGATT
Downstream 100 bases:
>100_bases AATTGGAGGTTAATTATGAATTACACTGAAAAGGAATTACTACTAGAGAATATATTTTTTGATGTGACTGGAATTAATTT TAATAAAAATAACAATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MEKVLIYPFNYNFFTILNHCNKISDIEINSLVSPSGWGLCNKEYNVNNIITKVTNDFQSELKKNSLVWFVDSKENLDLEK FIIPKLKVALKEGKKILYTRDDLNKISRYISHYEFKKINEWNLEKYEIRDIEGISQINTPIIFICGLYGGLDTFDVNIRI GEELRKRGFSILQFGPKKESYLFKMIPIPEFMFDDSISSKTKIINFNHFIKDKEVEAKPDLIIIEVPGELFPFSRKMVGN FGIRAFEISNAVINDCGILCIPSSIYDREYCEELKYFIKGRHGINIDYFSIEKKVIDTYETEVKQKFSYMSLDENFFVED IEDYEKTFFIHDNKQLLELVDNIVNQLKEYAKVISI
Sequences:
>Translated_356_residues MEKVLIYPFNYNFFTILNHCNKISDIEINSLVSPSGWGLCNKEYNVNNIITKVTNDFQSELKKNSLVWFVDSKENLDLEK FIIPKLKVALKEGKKILYTRDDLNKISRYISHYEFKKINEWNLEKYEIRDIEGISQINTPIIFICGLYGGLDTFDVNIRI GEELRKRGFSILQFGPKKESYLFKMIPIPEFMFDDSISSKTKIINFNHFIKDKEVEAKPDLIIIEVPGELFPFSRKMVGN FGIRAFEISNAVINDCGILCIPSSIYDREYCEELKYFIKGRHGINIDYFSIEKKVIDTYETEVKQKFSYMSLDENFFVED IEDYEKTFFIHDNKQLLELVDNIVNQLKEYAKVISI >Mature_356_residues MEKVLIYPFNYNFFTILNHCNKISDIEINSLVSPSGWGLCNKEYNVNNIITKVTNDFQSELKKNSLVWFVDSKENLDLEK FIIPKLKVALKEGKKILYTRDDLNKISRYISHYEFKKINEWNLEKYEIRDIEGISQINTPIIFICGLYGGLDTFDVNIRI GEELRKRGFSILQFGPKKESYLFKMIPIPEFMFDDSISSKTKIINFNHFIKDKEVEAKPDLIIIEVPGELFPFSRKMVGN FGIRAFEISNAVINDCGILCIPSSIYDREYCEELKYFIKGRHGINIDYFSIEKKVIDTYETEVKQKFSYMSLDENFFVED IEDYEKTFFIHDNKQLLELVDNIVNQLKEYAKVISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41854; Mature: 41854
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKVLIYPFNYNFFTILNHCNKISDIEINSLVSPSGWGLCNKEYNVNNIITKVTNDFQSE CCEEEEEECCCCHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LKKNSLVWFVDSKENLDLEKFIIPKLKVALKEGKKILYTRDDLNKISRYISHYEFKKINE HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCC WNLEKYEIRDIEGISQINTPIIFICGLYGGLDTFDVNIRIGEELRKRGFSILQFGPKKES CCCCEEEECCCCCHHHHCCCEEEEEECCCCCCEEEEEEEECHHHHHCCCEEEEECCCCCC YLFKMIPIPEFMFDDSISSKTKIINFNHFIKDKEVEAKPDLIIIEVPGELFPFSRKMVGN EEEEEECCCHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHC FGIRAFEISNAVINDCGILCIPSSIYDREYCEELKYFIKGRHGINIDYFSIEKKVIDTYE CCEEEEEECCHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHH TEVKQKFSYMSLDENFFVEDIEDYEKTFFIHDNKQLLELVDNIVNQLKEYAKVISI HHHHHHHHHCCCCCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKVLIYPFNYNFFTILNHCNKISDIEINSLVSPSGWGLCNKEYNVNNIITKVTNDFQSE CCEEEEEECCCCHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LKKNSLVWFVDSKENLDLEKFIIPKLKVALKEGKKILYTRDDLNKISRYISHYEFKKINE HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCC WNLEKYEIRDIEGISQINTPIIFICGLYGGLDTFDVNIRIGEELRKRGFSILQFGPKKES CCCCEEEECCCCCHHHHCCCEEEEEECCCCCCEEEEEEEECHHHHHCCCEEEEECCCCCC YLFKMIPIPEFMFDDSISSKTKIINFNHFIKDKEVEAKPDLIIIEVPGELFPFSRKMVGN EEEEEECCCHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHC FGIRAFEISNAVINDCGILCIPSSIYDREYCEELKYFIKGRHGINIDYFSIEKKVIDTYE CCEEEEEECCHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHH TEVKQKFSYMSLDENFFVEDIEDYEKTFFIHDNKQLLELVDNIVNQLKEYAKVISI HHHHHHHHHCCCCCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA