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The map label for this gene is licB [H]

Identifier: 126697708

GI number: 126697708

Start: 182979

End: 183305

Strand: Direct

Name: licB [H]

Synonym: CD0136

Alternate gene names: 126697708

Gene position: 182979-183305 (Clockwise)

Preceding gene: 126697707

Following gene: 126697709

Centisome position: 4.26

GC content: 30.58

Gene sequence:

>327_bases
ATGAAAAGAAAAGTATATTTATTTTGTAGCTTTGGTATGTCAACAAGTTTACTTGCAGATAAAATGCAGAAGGTAGCAGA
TGAACACAATTTACCAATAGAAGTAGAGGCATTTCCGATAGCAGAAATTGACAAAATAGTTGAAGAAAAAAATCCAGATT
GTATATTATTAGGACCGCAAGTTAAATACATGCTAAAGGAGTTAAAACCAAAGTTTGAAGCTCAAGGAAAACTTATAGAT
ATAATCAATGAAGTTGATTATGGAACTATGAATGGGGAAAAAGTATTAAAGCTTGCTATAAAGCTAATAAAATCTAAGCA
AGCGTAG

Upstream 100 bases:

>100_bases
TAATGACTTGTATGAGTGAGAGAAACCTTATAAAAGAAATGATTATGTTAAGAAAAGAAATTCAAAAATTAAAATAAAAA
AATTAAGGGGGATTTAAAAA

Downstream 100 bases:

>100_bases
AATTATAGTAAAAAATAATAGGAAATGAGGGTGGATAGATGAATAGATTGGAAAGAATACTTATGCCATTGGCTGAAAAA
ATAGGTAAAAATAAATTATT

Product: PTS system transporter subunit IIB

Products: NA

Alternate protein names: EIIB-Lic; PTS system lichenan-specific EIIB component [H]

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKRKVYLFCSFGMSTSLLADKMQKVADEHNLPIEVEAFPIAEIDKIVEEKNPDCILLGPQVKYMLKELKPKFEAQGKLID
IINEVDYGTMNGEKVLKLAIKLIKSKQA

Sequences:

>Translated_108_residues
MKRKVYLFCSFGMSTSLLADKMQKVADEHNLPIEVEAFPIAEIDKIVEEKNPDCILLGPQVKYMLKELKPKFEAQGKLID
IINEVDYGTMNGEKVLKLAIKLIKSKQA
>Mature_108_residues
MKRKVYLFCSFGMSTSLLADKMQKVADEHNLPIEVEAFPIAEIDKIVEEKNPDCILLGPQVKYMLKELKPKFEAQGKLID
IINEVDYGTMNGEKVLKLAIKLIKSKQA

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788034, Length=97, Percent_Identity=42.2680412371134, Blast_Score=76, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 12256; Mature: 12256

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKVYLFCSFGMSTSLLADKMQKVADEHNLPIEVEAFPIAEIDKIVEEKNPDCILLGPQ
CCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEECHH
VKYMLKELKPKFEAQGKLIDIINEVDYGTMNGEKVLKLAIKLIKSKQA
HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRKVYLFCSFGMSTSLLADKMQKVADEHNLPIEVEAFPIAEIDKIVEEKNPDCILLGPQ
CCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEECHH
VKYMLKELKPKFEAQGKLIDIINEVDYGTMNGEKVLKLAIKLIKSKQA
HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]