| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is mreB1 [H]
Identifier: 126697699
GI number: 126697699
Start: 171875
End: 172894
Strand: Direct
Name: mreB1 [H]
Synonym: CD0127
Alternate gene names: 126697699
Gene position: 171875-172894 (Clockwise)
Preceding gene: 126697698
Following gene: 126697700
Centisome position: 4.01
GC content: 35.0
Gene sequence:
>1020_bases ATGGCTGGAGCTGATATAGGCATAGATTTAGGTACTGCAAATGTGCTTGTTTATGTTAGTGGTAAGGGAATCGTTTTAGA AGAACCATCTGTTGTGGCGATAGACAAAAGAACAGATTCTGTTTTAGCTGTGGGAGAAGAAGCTAAAAAGATGATAGGGA GAACACCAGGTAATATAGTCGCTATAAGACCTTTAAGAGATGGTGTAATTTCAGATTATGATGTAACTGAGAAGATGTTA AAATCTTTTATAGATAAGATAGTTGATAAAAAGGGATTTGGAAGATTTTTTATGCCAAGAATTATGGTATGTGTACCAAC AGGTGTCACAGAAGTGGAAAAAAGAGCAGTAGAAGATGCTACGAGACAAGCTGGAGCTAGAGAAGTATATATCATAGAAG AACCAATAGCAGCTGCCATAGGAGCTGGTGTAGACATATCACAGCCTAATGGTAATATGATTATAGATATTGGTGGAGGT ACTGTAGATATAGCTGTAATATCTCTAGGAGGAGCTGTTGTAAGTGAATCTATAAAGGTTGGTGGAGATAGATTTGATGA TGCTATAGTTAAATATATGAAAAAACAACACAATCTTCTTATAGGAGAAAGAACAGCAGAGAAAATCAAGTTTGAAATAG GTTCTGCATTTAAGAGAGAAGAAGAAAAATATATGAAGATAACAGGAAGAAATTTAATTACAGGACTTCCTAGTTCTATA ACTATAAATTCAACAGAAATGTTGGAAGCACTTAGAGAATGTGTTGAGCAAATAGTAGTTGCTACTCATGCTGTTTTGGA AAAAACGCCTCCTGAGTTAGCAGCAGATATAGGAGATGTCGGTATAATAATGACTGGAGGAGGTTCATTATTATATGGAT TAGATAAAATAATAGAACAGAGGACAGGAATAACTGTTACAATAGCAGATGAACCATTATCTTGTGTTGCAAAAGGTACA GGAATAGCTTTAGGTTCAATAGACTTACTTGAAACTGGTGGGTCTTTCAAAAGAAAATAA
Upstream 100 bases:
>100_bases TTCTCTTGATTAAAGCGAGATTTTTGTATATGCTTTATTATAGGAGTATTAAAATAGGCTTATAATATAATCTAATATTA TAAATAAAGGAGTTGAAAAA
Downstream 100 bases:
>100_bases TTAGGAGAGTTTAGAATGTTAAATATAGATGAAATAAAAAAATTAATACCACATAGATATCCATTTTTATTAGTAGACAA GATTACAGAGCTAGAAGTTG
Product: rod shape-determining protein Mbl
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MAGADIGIDLGTANVLVYVSGKGIVLEEPSVVAIDKRTDSVLAVGEEAKKMIGRTPGNIVAIRPLRDGVISDYDVTEKML KSFIDKIVDKKGFGRFFMPRIMVCVPTGVTEVEKRAVEDATRQAGAREVYIIEEPIAAAIGAGVDISQPNGNMIIDIGGG TVDIAVISLGGAVVSESIKVGGDRFDDAIVKYMKKQHNLLIGERTAEKIKFEIGSAFKREEEKYMKITGRNLITGLPSSI TINSTEMLEALRECVEQIVVATHAVLEKTPPELAADIGDVGIIMTGGGSLLYGLDKIIEQRTGITVTIADEPLSCVAKGT GIALGSIDLLETGGSFKRK
Sequences:
>Translated_339_residues MAGADIGIDLGTANVLVYVSGKGIVLEEPSVVAIDKRTDSVLAVGEEAKKMIGRTPGNIVAIRPLRDGVISDYDVTEKML KSFIDKIVDKKGFGRFFMPRIMVCVPTGVTEVEKRAVEDATRQAGAREVYIIEEPIAAAIGAGVDISQPNGNMIIDIGGG TVDIAVISLGGAVVSESIKVGGDRFDDAIVKYMKKQHNLLIGERTAEKIKFEIGSAFKREEEKYMKITGRNLITGLPSSI TINSTEMLEALRECVEQIVVATHAVLEKTPPELAADIGDVGIIMTGGGSLLYGLDKIIEQRTGITVTIADEPLSCVAKGT GIALGSIDLLETGGSFKRK >Mature_338_residues AGADIGIDLGTANVLVYVSGKGIVLEEPSVVAIDKRTDSVLAVGEEAKKMIGRTPGNIVAIRPLRDGVISDYDVTEKMLK SFIDKIVDKKGFGRFFMPRIMVCVPTGVTEVEKRAVEDATRQAGAREVYIIEEPIAAAIGAGVDISQPNGNMIIDIGGGT VDIAVISLGGAVVSESIKVGGDRFDDAIVKYMKKQHNLLIGERTAEKIKFEIGSAFKREEEKYMKITGRNLITGLPSSIT INSTEMLEALRECVEQIVVATHAVLEKTPPELAADIGDVGIIMTGGGSLLYGLDKIIEQRTGITVTIADEPLSCVAKGTG IALGSIDLLETGGSFKRK
Specific function: Involved in formation of the rod shape of the cell [H]
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Escherichia coli, GI87082236, Length=333, Percent_Identity=54.954954954955, Blast_Score=367, Evalue=1e-103, Organism=Escherichia coli, GI1788875, Length=250, Percent_Identity=25.6, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17534771, Length=392, Percent_Identity=24.234693877551, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322426, Length=387, Percent_Identity=26.0981912144703, Blast_Score=73, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004753 [H]
Pfam domain/function: PF06723 MreB_Mbl [H]
EC number: NA
Molecular weight: Translated: 36063; Mature: 35932
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGADIGIDLGTANVLVYVSGKGIVLEEPSVVAIDKRTDSVLAVGEEAKKMIGRTPGNIV CCCCCCEEEECCCEEEEEECCCEEEEECCCEEEEECCCCCEEEECHHHHHHHCCCCCCEE AIRPLRDGVISDYDVTEKMLKSFIDKIVDKKGFGRFFMPRIMVCVPTGVTEVEKRAVEDA EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCHHHHHHHHHHHH TRQAGAREVYIIEEPIAAAIGAGVDISQPNGNMIIDIGGGTVDIAVISLGGAVVSESIKV HHHCCCCEEEEECCCHHHHHCCCCEEECCCCCEEEEECCCEEEEEEEEECCHHHHHHHHC GGDRFDDAIVKYMKKQHNLLIGERTAEKIKFEIGSAFKREEEKYMKITGRNLITGLPSSI CCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCCCCE TINSTEMLEALRECVEQIVVATHAVLEKTPPELAADIGDVGIIMTGGGSLLYGLDKIIEQ EECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHH RTGITVTIADEPLSCVAKGTGIALGSIDLLETGGSFKRK HCCEEEEECCCCHHHHHCCCCEEECCEEEEECCCCCCCC >Mature Secondary Structure AGADIGIDLGTANVLVYVSGKGIVLEEPSVVAIDKRTDSVLAVGEEAKKMIGRTPGNIV CCCCCEEEECCCEEEEEECCCEEEEECCCEEEEECCCCCEEEECHHHHHHHCCCCCCEE AIRPLRDGVISDYDVTEKMLKSFIDKIVDKKGFGRFFMPRIMVCVPTGVTEVEKRAVEDA EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCHHHHHHHHHHHH TRQAGAREVYIIEEPIAAAIGAGVDISQPNGNMIIDIGGGTVDIAVISLGGAVVSESIKV HHHCCCCEEEEECCCHHHHHCCCCEEECCCCCEEEEECCCEEEEEEEEECCHHHHHHHHC GGDRFDDAIVKYMKKQHNLLIGERTAEKIKFEIGSAFKREEEKYMKITGRNLITGLPSSI CCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCCCCE TINSTEMLEALRECVEQIVVATHAVLEKTPPELAADIGDVGIIMTGGGSLLYGLDKIIEQ EECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHH RTGITVTIADEPLSCVAKGTGIALGSIDLLETGGSFKRK HCCEEEEECCCCHHHHHCCCCEEECCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400225; 1400224; 9384377; 8387996 [H]