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The map label for this gene is infA

Identifier: 126697664

GI number: 126697664

Start: 114954

End: 115172

Strand: Direct

Name: infA

Synonym: CD0094

Alternate gene names: 126697664

Gene position: 114954-115172 (Clockwise)

Preceding gene: 126697663

Following gene: 126697665

Centisome position: 2.68

GC content: 34.25

Gene sequence:

>219_bases
ATGGCCAAAAAAGATGTTATAGAATTAGAAGGTACAGTTTCAGAAGCTTTACCTAATGCTATGTTCAAAGTTAAACTAGA
AAATGGACATGAGATATTATGCCACATTTCTGGAAAGCTAAGAATGAACTTCATAAGAATTCTTGAAGGTGACAAGGTGA
ATGTTGAACTTTCTCCATATGACCTTACAAGAGGAAGAATTACTTGGCGTAAGAAGTAG

Upstream 100 bases:

>100_bases
GTAGTATCTGGACAAGAGATTACAGATTCTTTTTTAAGAGCTGAACTTACTAAGTTAAATTAGATAATTTAACTTATTGA
AATGGAGGGCTGGTTAGTTA

Downstream 100 bases:

>100_bases
ACTATATTAATATTTAGTCTAAGGAGGGATTAATAATGAAGGTTAGACCATCAGTAAAACCAATATGTGAAAAATGTAAA
GTAATAAAAAGAAAAGGAAA

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MAKKDVIELEGTVSEALPNAMFKVKLENGHEILCHISGKLRMNFIRILEGDKVNVELSPYDLTRGRITWRKK

Sequences:

>Translated_72_residues
MAKKDVIELEGTVSEALPNAMFKVKLENGHEILCHISGKLRMNFIRILEGDKVNVELSPYDLTRGRITWRKK
>Mature_71_residues
AKKDVIELEGTVSEALPNAMFKVKLENGHEILCHISGKLRMNFIRILEGDKVNVELSPYDLTRGRITWRKK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain

Homologues:

Organism=Escherichia coli, GI1787110, Length=72, Percent_Identity=65.2777777777778, Blast_Score=107, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IF1_CLOD6 (Q18CI2)

Other databases:

- EMBL:   AM180355
- RefSeq:   YP_001086561.1
- ProteinModelPortal:   Q18CI2
- SMR:   Q18CI2
- STRING:   Q18CI2
- GeneID:   4916516
- GenomeReviews:   AM180355_GR
- KEGG:   cdf:CD0094
- NMPDR:   fig|1496.1.peg.3628
- eggNOG:   COG0361
- HOGENOM:   HBG286099
- OMA:   KMRMHFI
- ProtClustDB:   PRK00276
- GO:   GO:0005737
- HAMAP:   MF_00075
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00316
- TIGRFAMs:   TIGR00008

Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 8282; Mature: 8151

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50832 S1_IF1_TYPE; PS00693 LUM_BINDING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKDVIELEGTVSEALPNAMFKVKLENGHEILCHISGKLRMNFIRILEGDKVNVELSPY
CCCCCEEEECCCHHHCCCCEEEEEEECCCCEEEEEECCCEEEEEEEEECCCEEEEEECCC
DLTRGRITWRKK
CCCCCEEEEECC
>Mature Secondary Structure 
AKKDVIELEGTVSEALPNAMFKVKLENGHEILCHISGKLRMNFIRILEGDKVNVELSPY
CCCCEEEECCCHHHCCCCEEEEEEECCCCEEEEEECCCEEEEEEEEECCCEEEEEECCC
DLTRGRITWRKK
CCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA