Click here to switch to the map view.

The map label for this gene is yacP [H]

Identifier: 126697622

GI number: 126697622

Start: 82411

End: 82938

Strand: Direct

Name: yacP [H]

Synonym: CD0056

Alternate gene names: 126697622

Gene position: 82411-82938 (Clockwise)

Preceding gene: 126697621

Following gene: 126697623

Centisome position: 1.92

GC content: 29.55

Gene sequence:

>528_bases
ATGAAAAAAAATATAAATCATTACTTAATAATAGATGGCTACAATATTATAAATGCGTGGGACAATTTGAAAGAACTGGC
TAAAGAGGACTTAGAAGATTCTCGAGAAAAGCTTATTGATGACATTATAGAATTTTCTGAGTTTATGGGTTATAAGACTA
TAATAGTTTTTGATGCTTATAATGTTAAAAATTCTCGAGAAAAAGTTGAAAAAAGAAAACACATAACAATAGTTTATACA
AGAGAACACCAAACAGCAGATAGTTATATAGAGAAATTTATAACTTCTTTATCAAAGTATGATGATGTAAAAGTAGCCAC
TAATGACTATGCAGAACAGCAAATGATTTTAGGAAAAGGTGCTACTAGAATGTCTGCAAGAGAATTAAAGTTAGAGTTAG
ATCGTTCCAAGAATAAAATGAAGGAAAAAAATATCGGTTTGAGGAAAAAAATTCAGCGAAATTGGTTGGAGGAAAGGTTA
GATAAAGAAACATTGTCGAAACTTGAGAACATTCGTAGAAAGCGTTGA

Upstream 100 bases:

>100_bases
TGCCAATGATAGGTAATGTTACATCTTTAAATGCATCTGTAGCAGGTGGAATACTTTTATATGAGATATTCAGACAAAGA
CTGGATAAAAGTAAATAGGC

Downstream 100 bases:

>100_bases
AATTACTAGGTTCTTTAGACTATAATATACCTATAAATTTGTTTTATATATGGGGGAGATTTACATGTTGGTAGCAAAAG
AAAAAAGTTATGAGTTAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKKNINHYLIIDGYNIINAWDNLKELAKEDLEDSREKLIDDIIEFSEFMGYKTIIVFDAYNVKNSREKVEKRKHITIVYT
REHQTADSYIEKFITSLSKYDDVKVATNDYAEQQMILGKGATRMSARELKLELDRSKNKMKEKNIGLRKKIQRNWLEERL
DKETLSKLENIRRKR

Sequences:

>Translated_175_residues
MKKNINHYLIIDGYNIINAWDNLKELAKEDLEDSREKLIDDIIEFSEFMGYKTIIVFDAYNVKNSREKVEKRKHITIVYT
REHQTADSYIEKFITSLSKYDDVKVATNDYAEQQMILGKGATRMSARELKLELDRSKNKMKEKNIGLRKKIQRNWLEERL
DKETLSKLENIRRKR
>Mature_175_residues
MKKNINHYLIIDGYNIINAWDNLKELAKEDLEDSREKLIDDIIEFSEFMGYKTIIVFDAYNVKNSREKVEKRKHITIVYT
REHQTADSYIEKFITSLSKYDDVKVATNDYAEQQMILGKGATRMSARELKLELDRSKNKMKEKNIGLRKKIQRNWLEERL
DKETLSKLENIRRKR

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 20936; Mature: 20936

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNINHYLIIDGYNIINAWDNLKELAKEDLEDSREKLIDDIIEFSEFMGYKTIIVFDAY
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
NVKNSREKVEKRKHITIVYTREHQTADSYIEKFITSLSKYDDVKVATNDYAEQQMILGKG
CCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCC
ATRMSARELKLELDRSKNKMKEKNIGLRKKIQRNWLEERLDKETLSKLENIRRKR
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKNINHYLIIDGYNIINAWDNLKELAKEDLEDSREKLIDDIIEFSEFMGYKTIIVFDAY
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
NVKNSREKVEKRKHITIVYTREHQTADSYIEKFITSLSKYDDVKVATNDYAEQQMILGKG
CCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCC
ATRMSARELKLELDRSKNKMKEKNIGLRKKIQRNWLEERLDKETLSKLENIRRKR
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]