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The map label for this gene is yacH [H]

Identifier: 126697590

GI number: 126697590

Start: 41392

End: 41886

Strand: Direct

Name: yacH [H]

Synonym: CD0024

Alternate gene names: 126697590

Gene position: 41392-41886 (Clockwise)

Preceding gene: 126697589

Following gene: 126697591

Centisome position: 0.96

GC content: 26.87

Gene sequence:

>495_bases
ATGCTATGTCAAAAATGCAATAAGAATAAAGCATCTGTATATTATAATAAGATAGTCAATGGAGAAAAAACAGAGATGTA
TTTATGTAGTGAGTGTGCAAAAGAGAATACAGAAATGAATTTTAACTTAGATATGCCTTTTTCAATGATGGATATATTTT
CTAATTTAGGTTTTCAACCTAAAAAAGAACTTGAGGAAAAGCTAGTTTGTCCTAAATGCAATACAACATATAGTGAGTTT
AAGAATAATGGGAGATTTGGATGTAGTGAATGTTATAATGCATTTAGTAGTCAAGTAAATCCAATGCTTCAAAATATACA
TGGGCATATAGAACATACAGGAAAAGCACCTAAAAAATCTTTTTATAAGATAAGTGTAGAAAATGAGATTAAAGAACTAA
AAGAAGATTTAGATAGAGCTATAAAAAATGAAGAGTATGAATTAGCAGCTCAATTTAGAGATAAAATTAAATATTTAAAA
GGTTCTATTGACTAA

Upstream 100 bases:

>100_bases
ATCATTGTGTATGCCAATATATGAATTAAAAGAGAAGGTAAGGTCTAATATTTTAAAGAATATAATAATAGGATTATTTA
GTATAGAGGAGTGATAATTT

Downstream 100 bases:

>100_bases
GATTGGAGTGATATTATGAAAGAGAACATAGTCATGAAATCAAGAGTTAGGCTAGCTAGAAATTTAAATAACTATCCATT
TCCAAATAAATTAGATAAAG

Product: DNA repair protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MLCQKCNKNKASVYYNKIVNGEKTEMYLCSECAKENTEMNFNLDMPFSMMDIFSNLGFQPKKELEEKLVCPKCNTTYSEF
KNNGRFGCSECYNAFSSQVNPMLQNIHGHIEHTGKAPKKSFYKISVENEIKELKEDLDRAIKNEEYELAAQFRDKIKYLK
GSID

Sequences:

>Translated_164_residues
MLCQKCNKNKASVYYNKIVNGEKTEMYLCSECAKENTEMNFNLDMPFSMMDIFSNLGFQPKKELEEKLVCPKCNTTYSEF
KNNGRFGCSECYNAFSSQVNPMLQNIHGHIEHTGKAPKKSFYKISVENEIKELKEDLDRAIKNEEYELAAQFRDKIKYLK
GSID
>Mature_164_residues
MLCQKCNKNKASVYYNKIVNGEKTEMYLCSECAKENTEMNFNLDMPFSMMDIFSNLGFQPKKELEEKLVCPKCNTTYSEF
KNNGRFGCSECYNAFSSQVNPMLQNIHGHIEHTGKAPKKSFYKISVENEIKELKEDLDRAIKNEEYELAAQFRDKIKYLK
GSID

Specific function: Unknown

COG id: COG3880

COG function: function code S; Uncharacterized protein with conserved CXXC pairs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 UVR domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001943 [H]

Pfam domain/function: PF02151 UVR [H]

EC number: NA

Molecular weight: Translated: 19049; Mature: 19049

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50151 UVR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCQKCNKNKASVYYNKIVNGEKTEMYLCSECAKENTEMNFNLDMPFSMMDIFSNLGFQP
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCC
KKELEEKLVCPKCNTTYSEFKNNGRFGCSECYNAFSSQVNPMLQNIHGHIEHTGKAPKKS
HHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FYKISVENEIKELKEDLDRAIKNEEYELAAQFRDKIKYLKGSID
EEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLCQKCNKNKASVYYNKIVNGEKTEMYLCSECAKENTEMNFNLDMPFSMMDIFSNLGFQP
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCC
KKELEEKLVCPKCNTTYSEFKNNGRFGCSECYNAFSSQVNPMLQNIHGHIEHTGKAPKKS
HHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FYKISVENEIKELKEDLDRAIKNEEYELAAQFRDKIKYLKGSID
EEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]