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The map label for this gene is yrxA [H]

Identifier: 126697578

GI number: 126697578

Start: 16073

End: 16600

Strand: Direct

Name: yrxA [H]

Synonym: CD0012

Alternate gene names: 126697578

Gene position: 16073-16600 (Clockwise)

Preceding gene: 126697577

Following gene: 126697579

Centisome position: 0.37

GC content: 27.46

Gene sequence:

>528_bases
TTGGAAAGAAGGTGTAATATGAATTCTAATGAAAGAAGAAGTAAATTAATAGATATTTTAAAAGAATCTAAGCATCCTGT
AAAAGGTGGAACACTAGCTGAACTATTAAATGTAAGTAGGCAAGTAATAGTTCAAGATATAGCCCTTATAAGAGCTAGAG
GATTTGAAATAATAGCTACACCTCAAGGATATATAATATATAATCAACCGTATTTTACAAAACAAATAAAGTGTAAAAAT
CATAAGGATTCTAAAGAAATTTATGATGAATTAAAGATAATTGTAGATTTAGGTGGTATTATAAAAGATGTCATCGTAAA
TCATCCAACATATGGTCAGATAACTGCAGAACTTAATATTTATTCTAAAATGGATATAGACAACTTTATGAAGAAAGTTG
AGACAAATGAATTTAAACAATTATCGGTTCTGACAGAATGTAGCCATATTCATACAATTGAGGCAATAAAAGAAGAAACT
ATAGAAGCTATAGTAAAAGAGTTAAAGGACAACGGAATATTATCATAA

Upstream 100 bases:

>100_bases
TTTATTTATTATAAAAGTTAAGATTAAATAGAATATAAAGTCAATATTGATTTATAATAAGATAAAATATAAAATTATAT
AGTATAGGTAAAGTTTTTAT

Downstream 100 bases:

>100_bases
GGAGGAGTTGAATGAATTTTTTATCATTGGCTAAGACTGCCTCAACAAATAGCAATATAACTAAGAGAACTTTAGAAAAT
ATGCTCGATAATTTTAGTGA

Product: small-molecule-binding protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MERRCNMNSNERRSKLIDILKESKHPVKGGTLAELLNVSRQVIVQDIALIRARGFEIIATPQGYIIYNQPYFTKQIKCKN
HKDSKEIYDELKIIVDLGGIIKDVIVNHPTYGQITAELNIYSKMDIDNFMKKVETNEFKQLSVLTECSHIHTIEAIKEET
IEAIVKELKDNGILS

Sequences:

>Translated_175_residues
MERRCNMNSNERRSKLIDILKESKHPVKGGTLAELLNVSRQVIVQDIALIRARGFEIIATPQGYIIYNQPYFTKQIKCKN
HKDSKEIYDELKIIVDLGGIIKDVIVNHPTYGQITAELNIYSKMDIDNFMKKVETNEFKQLSVLTECSHIHTIEAIKEET
IEAIVKELKDNGILS
>Mature_175_residues
MERRCNMNSNERRSKLIDILKESKHPVKGGTLAELLNVSRQVIVQDIALIRARGFEIIATPQGYIIYNQPYFTKQIKCKN
HKDSKEIYDELKIIVDLGGIIKDVIVNHPTYGQITAELNIYSKMDIDNFMKKVETNEFKQLSVLTECSHIHTIEAIKEET
IEAIVKELKDNGILS

Specific function: Unknown

COG id: COG1827

COG function: function code R; Predicted small molecule binding protein (contains 3H domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004173
- InterPro:   IPR013196
- InterPro:   IPR011991
- ProDom:   PD469575 [H]

Pfam domain/function: PF02829 3H; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 20088; Mature: 20088

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRCNMNSNERRSKLIDILKESKHPVKGGTLAELLNVSRQVIVQDIALIRARGFEIIAT
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
PQGYIIYNQPYFTKQIKCKNHKDSKEIYDELKIIVDLGGIIKDVIVNHPTYGQITAELNI
CCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE
YSKMDIDNFMKKVETNEFKQLSVLTECSHIHTIEAIKEETIEAIVKELKDNGILS
HHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MERRCNMNSNERRSKLIDILKESKHPVKGGTLAELLNVSRQVIVQDIALIRARGFEIIAT
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
PQGYIIYNQPYFTKQIKCKNHKDSKEIYDELKIIVDLGGIIKDVIVNHPTYGQITAELNI
CCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE
YSKMDIDNFMKKVETNEFKQLSVLTECSHIHTIEAIKEETIEAIVKELKDNGILS
HHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444804; 9384377 [H]