Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126697207

Identifier: 126697207

GI number: 126697207

Start: 1595414

End: 1595833

Strand: Direct

Name: 126697207

Synonym: P9301_18691

Alternate gene names: NA

Gene position: 1595414-1595833 (Clockwise)

Preceding gene: 126697204

Following gene: 126697208

Centisome position: 97.17

GC content: 30.95

Gene sequence:

>420_bases
ATGGATGCAACACTAGTTAAAGATATCGGAATTAAATCATTATTAGTTGGCGGAGCTGTACTAGTTTCTTTTTGGACTTT
TAATGCAGTCAAATTAGTTATAAGCGCCAGAGGAATTAATCCATTAGTAAGAAAGTTTTTCGATCAAATAGCCGCTGGCA
GAATTGATGCAGCTTATGGTTTGACTACAAAAACTTATAAAACTCATGTAAAACGACAAGACTTTCTTAAATTTTTAGCT
AGTCTTAATCTCAATAAATACAGAAATTTAAAATCAGGAAGGCCTAGAGTCCAAGAAGATCAAATCATAATAACTTTGAA
TTTAAAATCAGAAGATAAACAAGATGAGCTCCCATTAGATTTTACTTTTGCAAAAACTGACAATGATTGGAAAATAGACA
GAATAGCTAAAGTGAATTAA

Upstream 100 bases:

>100_bases
AGGAATTACCGGCATTATGGATTAAAATTAGTATTATTTTGACAAAAAAAGCCATCAAAAACGATTTCTTTTCTTAAAGT
AATAAAAAACTTAAATTAAC

Downstream 100 bases:

>100_bases
TAATTTCTTGTGAGGCAGAAAGAATTGTTTAAAGAAGAAATAATACATCAATTAGAATTACACCCAAGTAGATTAGATAA
AGAAAAAATCATCTCAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDATLVKDIGIKSLLVGGAVLVSFWTFNAVKLVISARGINPLVRKFFDQIAAGRIDAAYGLTTKTYKTHVKRQDFLKFLA
SLNLNKYRNLKSGRPRVQEDQIIITLNLKSEDKQDELPLDFTFAKTDNDWKIDRIAKVN

Sequences:

>Translated_139_residues
MDATLVKDIGIKSLLVGGAVLVSFWTFNAVKLVISARGINPLVRKFFDQIAAGRIDAAYGLTTKTYKTHVKRQDFLKFLA
SLNLNKYRNLKSGRPRVQEDQIIITLNLKSEDKQDELPLDFTFAKTDNDWKIDRIAKVN
>Mature_139_residues
MDATLVKDIGIKSLLVGGAVLVSFWTFNAVKLVISARGINPLVRKFFDQIAAGRIDAAYGLTTKTYKTHVKRQDFLKFLA
SLNLNKYRNLKSGRPRVQEDQIIITLNLKSEDKQDELPLDFTFAKTDNDWKIDRIAKVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15772; Mature: 15772

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDATLVKDIGIKSLLVGGAVLVSFWTFNAVKLVISARGINPLVRKFFDQIAAGRIDAAYG
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHCC
LTTKTYKTHVKRQDFLKFLASLNLNKYRNLKSGRPRVQEDQIIITLNLKSEDKQDELPLD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEE
FTFAKTDNDWKIDRIAKVN
EEEECCCCCCCCCEEEECC
>Mature Secondary Structure
MDATLVKDIGIKSLLVGGAVLVSFWTFNAVKLVISARGINPLVRKFFDQIAAGRIDAAYG
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHCC
LTTKTYKTHVKRQDFLKFLASLNLNKYRNLKSGRPRVQEDQIIITLNLKSEDKQDELPLD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEE
FTFAKTDNDWKIDRIAKVN
EEEECCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA