| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126697188
Identifier: 126697188
GI number: 126697188
Start: 1576766
End: 1578304
Strand: Reverse
Name: 126697188
Synonym: P9301_18501
Alternate gene names: NA
Gene position: 1578304-1576766 (Counterclockwise)
Preceding gene: 126697195
Following gene: 126697187
Centisome position: 96.13
GC content: 28.59
Gene sequence:
>1539_bases ATGAAACTTAAATTTGCCTTTTTAAACTTATTTTTAGGCTGTATTTCTCTGTTAACAATAAACACTAAATTTACTGCAAA TGTAAAAGGAGAAGAATTGCTAAAGGTTGAACTAAATGATGAAATTAAAAAAGGAAAATTTTTAATTGGTTTAAAGCAAT ATTTAGGCGGGGAGAATGACAGTTTTTCAAAAAAAAAGAATATTAATTTTGTCACAGATAAAGGTTTTTTAAACCTGATA TCATCCAACGGTATTAAATATAAATCAAAACAGATTAATATTAGCTGGGTGGATATACCCATCAAAAATCCAAAAACAAT CGAAAGAATTGTTTTTGGTCCTTTTGCTAGTTATGAATCAGCAAAAAAACAAGCAGAAAAACTTAAAAATAAGGGGTTTG AGACGAGTGTTGCTTACCCTAAAAATTGGGAAGTATGGATTCCCTTTAAAGGGGATCTGCCAGATTTTGAATTAAAAAAT AAGATTTCCAGAAAAATAAAAAATTATCAAATTACTCCTGTCCTTAGAAATGAATATAGTGTTATGAAACTTGAAGGACC TATATATATTTATGCTCAAGAGGAAATACAGATCAATGGTGTCAATTTTGGTAAACATTTTTATTTAATAAAAGATTCAT ATGGAACTTGGACATTAGTTCAAAAAATTGAATTTGACGAATATTTGGCAGGTGTTTTGCCCTATGAAATTGGACCGAAT TCTCCTTTAGAAGCACTCAAGGCTCAAGCAGTTATTGCAAGAACTTGGGGCATATTTAATTCCGATAGATTTAATATGGA TAATTATCATTTATGTATAAGCACTCAATGTCAAGTTTATAAGCCTTCTAAAATTTCAAATAAAAACATACAAAAAGCTA TAGAAGCAACTTCAAATTTAATTCTCACTTATGGAAATAAACCAATAAATGCTTTTTACCATGGTTCTAATGGTGGAGTA TCTGCTACTGCAGGCGAGTCTTGGCAAATTCAAGATTATTCTTATTTCAATTCAATCATTGATGGTTCTAAATCATTAAA TAAATTTTTTAAACTTCCAATTACAAATGAATCTGATTTAAATAATTTTTTAGATTTTGATAAAGAACAGTTTTATGGGA GTAATCATTCTCTTTTTCGATGGAAGAAGAAAATTTCTAGTCTTGAAATTAAAGAAAAGTTAATTCAAAACAATCTTATA AATGTTAATGATGATGTTATGGATTTAAATTCTATTGAACGTGGGTCTAGTGGCAGAGTGATAAAATTGGAAATACAAAC GGACAAAGTTAACAAATCTATTGTTCTAGTTAAAGATGATATTCGACGGGTATTAAATTTTATACCTAGTAATTTGTTTA CTATTAATAAATTAAGTGATGATTTATGGCTTTTGAAAGGAGGAGGCTTCGGTCATGGTGTAGGTTTATCTCAGTCAGGA GCAATTGAAATGGCTAAATTAGGATTCTCTTATGAACAAATATTGAATCATTACTATCGAGATGTAAAACTGAAAAAAAT TGAGATATTGTCTCAATGA
Upstream 100 bases:
>100_bases TTTAGACATTTAAGTCAGATGTGTTTAATTAGAATAATCTAAACCTTTATACGTATTGGTGCAAATTAAATTTTTTAATT GATAAGGAAAGTTCTAATTT
Downstream 100 bases:
>100_bases AAGTTCAGTAATTAAAAATTTATTTTTATGAGTCAGGGTTTTTATAAAAATAGAAGATTGAAGTCGTTTATATTTCTTAG CGCTTGTTTTTTTGTAGCTC
Product: putative amidase enhancer
Products: NA
Alternate protein names: H-34 [H]
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MKLKFAFLNLFLGCISLLTINTKFTANVKGEELLKVELNDEIKKGKFLIGLKQYLGGENDSFSKKKNINFVTDKGFLNLI SSNGIKYKSKQINISWVDIPIKNPKTIERIVFGPFASYESAKKQAEKLKNKGFETSVAYPKNWEVWIPFKGDLPDFELKN KISRKIKNYQITPVLRNEYSVMKLEGPIYIYAQEEIQINGVNFGKHFYLIKDSYGTWTLVQKIEFDEYLAGVLPYEIGPN SPLEALKAQAVIARTWGIFNSDRFNMDNYHLCISTQCQVYKPSKISNKNIQKAIEATSNLILTYGNKPINAFYHGSNGGV SATAGESWQIQDYSYFNSIIDGSKSLNKFFKLPITNESDLNNFLDFDKEQFYGSNHSLFRWKKKISSLEIKEKLIQNNLI NVNDDVMDLNSIERGSSGRVIKLEIQTDKVNKSIVLVKDDIRRVLNFIPSNLFTINKLSDDLWLLKGGGFGHGVGLSQSG AIEMAKLGFSYEQILNHYYRDVKLKKIEILSQ
Sequences:
>Translated_512_residues MKLKFAFLNLFLGCISLLTINTKFTANVKGEELLKVELNDEIKKGKFLIGLKQYLGGENDSFSKKKNINFVTDKGFLNLI SSNGIKYKSKQINISWVDIPIKNPKTIERIVFGPFASYESAKKQAEKLKNKGFETSVAYPKNWEVWIPFKGDLPDFELKN KISRKIKNYQITPVLRNEYSVMKLEGPIYIYAQEEIQINGVNFGKHFYLIKDSYGTWTLVQKIEFDEYLAGVLPYEIGPN SPLEALKAQAVIARTWGIFNSDRFNMDNYHLCISTQCQVYKPSKISNKNIQKAIEATSNLILTYGNKPINAFYHGSNGGV SATAGESWQIQDYSYFNSIIDGSKSLNKFFKLPITNESDLNNFLDFDKEQFYGSNHSLFRWKKKISSLEIKEKLIQNNLI NVNDDVMDLNSIERGSSGRVIKLEIQTDKVNKSIVLVKDDIRRVLNFIPSNLFTINKLSDDLWLLKGGGFGHGVGLSQSG AIEMAKLGFSYEQILNHYYRDVKLKKIEILSQ >Mature_512_residues MKLKFAFLNLFLGCISLLTINTKFTANVKGEELLKVELNDEIKKGKFLIGLKQYLGGENDSFSKKKNINFVTDKGFLNLI SSNGIKYKSKQINISWVDIPIKNPKTIERIVFGPFASYESAKKQAEKLKNKGFETSVAYPKNWEVWIPFKGDLPDFELKN KISRKIKNYQITPVLRNEYSVMKLEGPIYIYAQEEIQINGVNFGKHFYLIKDSYGTWTLVQKIEFDEYLAGVLPYEIGPN SPLEALKAQAVIARTWGIFNSDRFNMDNYHLCISTQCQVYKPSKISNKNIQKAIEATSNLILTYGNKPINAFYHGSNGGV SATAGESWQIQDYSYFNSIIDGSKSLNKFFKLPITNESDLNNFLDFDKEQFYGSNHSLFRWKKKISSLEIKEKLIQNNLI NVNDDVMDLNSIERGSSGRVIKLEIQTDKVNKSIVLVKDDIRRVLNFIPSNLFTINKLSDDLWLLKGGGFGHGVGLSQSG AIEMAKLGFSYEQILNHYYRDVKLKKIEILSQ
Specific function: Might be involved in sporulation [H]
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013486 - InterPro: IPR013693 [H]
Pfam domain/function: PF08486 SpoIID [H]
EC number: NA
Molecular weight: Translated: 58446; Mature: 58446
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKFAFLNLFLGCISLLTINTKFTANVKGEELLKVELNDEIKKGKFLIGLKQYLGGEND CEEEHHHHHHHHHHHHHHEECCEEEECCCCCEEEEEEECCCCCCCEEEEEEHHHHCCCCC SFSKKKNINFVTDKGFLNLISSNGIKYKSKQINISWVDIPIKNPKTIERIVFGPFASYES CCCCCCCCEEEECCCHHHHHHCCCEEEECEEEEEEEEEEECCCCCHHHHEEECCCCCHHH AKKQAEKLKNKGFETSVAYPKNWEVWIPFKGDLPDFELKNKISRKIKNYQITPVLRNEYS HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEEEECCCEE VMKLEGPIYIYAQEEIQINGVNFGKHFYLIKDSYGTWTLVQKIEFDEYLAGVLPYEIGPN EEEECCCEEEEEECEEEEEEEEECCEEEEEECCCCCEEEEEEECHHHHHHCCCCCCCCCC SPLEALKAQAVIARTWGIFNSDRFNMDNYHLCISTQCQVYKPSKISNKNIQKAIEATSNL CHHHHHHHHHHEEHHCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHCCCE ILTYGNKPINAFYHGSNGGVSATAGESWQIQDYSYFNSIIDGSKSLNKFFKLPITNESDL EEEECCCCEEEEEECCCCCEEECCCCCEEECCHHHHHHHHCCCHHHHHHEECCCCCCCCC NNFLDFDKEQFYGSNHSLFRWKKKISSLEIKEKLIQNNLINVNDDVMDLNSIERGSSGRV HHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCE IKLEIQTDKVNKSIVLVKDDIRRVLNFIPSNLFTINKLSDDLWLLKGGGFGHGVGLSQSG EEEEEEECCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCC AIEMAKLGFSYEQILNHYYRDVKLKKIEILSQ CEEHHHHCCCHHHHHHHHHHCCEEEEEEEECC >Mature Secondary Structure MKLKFAFLNLFLGCISLLTINTKFTANVKGEELLKVELNDEIKKGKFLIGLKQYLGGEND CEEEHHHHHHHHHHHHHHEECCEEEECCCCCEEEEEEECCCCCCCEEEEEEHHHHCCCCC SFSKKKNINFVTDKGFLNLISSNGIKYKSKQINISWVDIPIKNPKTIERIVFGPFASYES CCCCCCCCEEEECCCHHHHHHCCCEEEECEEEEEEEEEEECCCCCHHHHEEECCCCCHHH AKKQAEKLKNKGFETSVAYPKNWEVWIPFKGDLPDFELKNKISRKIKNYQITPVLRNEYS HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEEEECCCEE VMKLEGPIYIYAQEEIQINGVNFGKHFYLIKDSYGTWTLVQKIEFDEYLAGVLPYEIGPN EEEECCCEEEEEECEEEEEEEEECCEEEEEECCCCCEEEEEEECHHHHHHCCCCCCCCCC SPLEALKAQAVIARTWGIFNSDRFNMDNYHLCISTQCQVYKPSKISNKNIQKAIEATSNL CHHHHHHHHHHEEHHCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHCCCE ILTYGNKPINAFYHGSNGGVSATAGESWQIQDYSYFNSIIDGSKSLNKFFKLPITNESDL EEEECCCCEEEEEECCCCCEEECCCCCEEECCHHHHHHHHCCCHHHHHHEECCCCCCCCC NNFLDFDKEQFYGSNHSLFRWKKKISSLEIKEKLIQNNLINVNDDVMDLNSIERGSSGRV HHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCE IKLEIQTDKVNKSIVLVKDDIRRVLNFIPSNLFTINKLSDDLWLLKGGGFGHGVGLSQSG EEEEEEECCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCC AIEMAKLGFSYEQILNHYYRDVKLKKIEILSQ CEEHHHHCCCHHHHHHHHHHCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA