Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is 126697188

Identifier: 126697188

GI number: 126697188

Start: 1576766

End: 1578304

Strand: Reverse

Name: 126697188

Synonym: P9301_18501

Alternate gene names: NA

Gene position: 1578304-1576766 (Counterclockwise)

Preceding gene: 126697195

Following gene: 126697187

Centisome position: 96.13

GC content: 28.59

Gene sequence:

>1539_bases
ATGAAACTTAAATTTGCCTTTTTAAACTTATTTTTAGGCTGTATTTCTCTGTTAACAATAAACACTAAATTTACTGCAAA
TGTAAAAGGAGAAGAATTGCTAAAGGTTGAACTAAATGATGAAATTAAAAAAGGAAAATTTTTAATTGGTTTAAAGCAAT
ATTTAGGCGGGGAGAATGACAGTTTTTCAAAAAAAAAGAATATTAATTTTGTCACAGATAAAGGTTTTTTAAACCTGATA
TCATCCAACGGTATTAAATATAAATCAAAACAGATTAATATTAGCTGGGTGGATATACCCATCAAAAATCCAAAAACAAT
CGAAAGAATTGTTTTTGGTCCTTTTGCTAGTTATGAATCAGCAAAAAAACAAGCAGAAAAACTTAAAAATAAGGGGTTTG
AGACGAGTGTTGCTTACCCTAAAAATTGGGAAGTATGGATTCCCTTTAAAGGGGATCTGCCAGATTTTGAATTAAAAAAT
AAGATTTCCAGAAAAATAAAAAATTATCAAATTACTCCTGTCCTTAGAAATGAATATAGTGTTATGAAACTTGAAGGACC
TATATATATTTATGCTCAAGAGGAAATACAGATCAATGGTGTCAATTTTGGTAAACATTTTTATTTAATAAAAGATTCAT
ATGGAACTTGGACATTAGTTCAAAAAATTGAATTTGACGAATATTTGGCAGGTGTTTTGCCCTATGAAATTGGACCGAAT
TCTCCTTTAGAAGCACTCAAGGCTCAAGCAGTTATTGCAAGAACTTGGGGCATATTTAATTCCGATAGATTTAATATGGA
TAATTATCATTTATGTATAAGCACTCAATGTCAAGTTTATAAGCCTTCTAAAATTTCAAATAAAAACATACAAAAAGCTA
TAGAAGCAACTTCAAATTTAATTCTCACTTATGGAAATAAACCAATAAATGCTTTTTACCATGGTTCTAATGGTGGAGTA
TCTGCTACTGCAGGCGAGTCTTGGCAAATTCAAGATTATTCTTATTTCAATTCAATCATTGATGGTTCTAAATCATTAAA
TAAATTTTTTAAACTTCCAATTACAAATGAATCTGATTTAAATAATTTTTTAGATTTTGATAAAGAACAGTTTTATGGGA
GTAATCATTCTCTTTTTCGATGGAAGAAGAAAATTTCTAGTCTTGAAATTAAAGAAAAGTTAATTCAAAACAATCTTATA
AATGTTAATGATGATGTTATGGATTTAAATTCTATTGAACGTGGGTCTAGTGGCAGAGTGATAAAATTGGAAATACAAAC
GGACAAAGTTAACAAATCTATTGTTCTAGTTAAAGATGATATTCGACGGGTATTAAATTTTATACCTAGTAATTTGTTTA
CTATTAATAAATTAAGTGATGATTTATGGCTTTTGAAAGGAGGAGGCTTCGGTCATGGTGTAGGTTTATCTCAGTCAGGA
GCAATTGAAATGGCTAAATTAGGATTCTCTTATGAACAAATATTGAATCATTACTATCGAGATGTAAAACTGAAAAAAAT
TGAGATATTGTCTCAATGA

Upstream 100 bases:

>100_bases
TTTAGACATTTAAGTCAGATGTGTTTAATTAGAATAATCTAAACCTTTATACGTATTGGTGCAAATTAAATTTTTTAATT
GATAAGGAAAGTTCTAATTT

Downstream 100 bases:

>100_bases
AAGTTCAGTAATTAAAAATTTATTTTTATGAGTCAGGGTTTTTATAAAAATAGAAGATTGAAGTCGTTTATATTTCTTAG
CGCTTGTTTTTTTGTAGCTC

Product: putative amidase enhancer

Products: NA

Alternate protein names: H-34 [H]

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MKLKFAFLNLFLGCISLLTINTKFTANVKGEELLKVELNDEIKKGKFLIGLKQYLGGENDSFSKKKNINFVTDKGFLNLI
SSNGIKYKSKQINISWVDIPIKNPKTIERIVFGPFASYESAKKQAEKLKNKGFETSVAYPKNWEVWIPFKGDLPDFELKN
KISRKIKNYQITPVLRNEYSVMKLEGPIYIYAQEEIQINGVNFGKHFYLIKDSYGTWTLVQKIEFDEYLAGVLPYEIGPN
SPLEALKAQAVIARTWGIFNSDRFNMDNYHLCISTQCQVYKPSKISNKNIQKAIEATSNLILTYGNKPINAFYHGSNGGV
SATAGESWQIQDYSYFNSIIDGSKSLNKFFKLPITNESDLNNFLDFDKEQFYGSNHSLFRWKKKISSLEIKEKLIQNNLI
NVNDDVMDLNSIERGSSGRVIKLEIQTDKVNKSIVLVKDDIRRVLNFIPSNLFTINKLSDDLWLLKGGGFGHGVGLSQSG
AIEMAKLGFSYEQILNHYYRDVKLKKIEILSQ

Sequences:

>Translated_512_residues
MKLKFAFLNLFLGCISLLTINTKFTANVKGEELLKVELNDEIKKGKFLIGLKQYLGGENDSFSKKKNINFVTDKGFLNLI
SSNGIKYKSKQINISWVDIPIKNPKTIERIVFGPFASYESAKKQAEKLKNKGFETSVAYPKNWEVWIPFKGDLPDFELKN
KISRKIKNYQITPVLRNEYSVMKLEGPIYIYAQEEIQINGVNFGKHFYLIKDSYGTWTLVQKIEFDEYLAGVLPYEIGPN
SPLEALKAQAVIARTWGIFNSDRFNMDNYHLCISTQCQVYKPSKISNKNIQKAIEATSNLILTYGNKPINAFYHGSNGGV
SATAGESWQIQDYSYFNSIIDGSKSLNKFFKLPITNESDLNNFLDFDKEQFYGSNHSLFRWKKKISSLEIKEKLIQNNLI
NVNDDVMDLNSIERGSSGRVIKLEIQTDKVNKSIVLVKDDIRRVLNFIPSNLFTINKLSDDLWLLKGGGFGHGVGLSQSG
AIEMAKLGFSYEQILNHYYRDVKLKKIEILSQ
>Mature_512_residues
MKLKFAFLNLFLGCISLLTINTKFTANVKGEELLKVELNDEIKKGKFLIGLKQYLGGENDSFSKKKNINFVTDKGFLNLI
SSNGIKYKSKQINISWVDIPIKNPKTIERIVFGPFASYESAKKQAEKLKNKGFETSVAYPKNWEVWIPFKGDLPDFELKN
KISRKIKNYQITPVLRNEYSVMKLEGPIYIYAQEEIQINGVNFGKHFYLIKDSYGTWTLVQKIEFDEYLAGVLPYEIGPN
SPLEALKAQAVIARTWGIFNSDRFNMDNYHLCISTQCQVYKPSKISNKNIQKAIEATSNLILTYGNKPINAFYHGSNGGV
SATAGESWQIQDYSYFNSIIDGSKSLNKFFKLPITNESDLNNFLDFDKEQFYGSNHSLFRWKKKISSLEIKEKLIQNNLI
NVNDDVMDLNSIERGSSGRVIKLEIQTDKVNKSIVLVKDDIRRVLNFIPSNLFTINKLSDDLWLLKGGGFGHGVGLSQSG
AIEMAKLGFSYEQILNHYYRDVKLKKIEILSQ

Specific function: Might be involved in sporulation [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 58446; Mature: 58446

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKFAFLNLFLGCISLLTINTKFTANVKGEELLKVELNDEIKKGKFLIGLKQYLGGEND
CEEEHHHHHHHHHHHHHHEECCEEEECCCCCEEEEEEECCCCCCCEEEEEEHHHHCCCCC
SFSKKKNINFVTDKGFLNLISSNGIKYKSKQINISWVDIPIKNPKTIERIVFGPFASYES
CCCCCCCCEEEECCCHHHHHHCCCEEEECEEEEEEEEEEECCCCCHHHHEEECCCCCHHH
AKKQAEKLKNKGFETSVAYPKNWEVWIPFKGDLPDFELKNKISRKIKNYQITPVLRNEYS
HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEEEECCCEE
VMKLEGPIYIYAQEEIQINGVNFGKHFYLIKDSYGTWTLVQKIEFDEYLAGVLPYEIGPN
EEEECCCEEEEEECEEEEEEEEECCEEEEEECCCCCEEEEEEECHHHHHHCCCCCCCCCC
SPLEALKAQAVIARTWGIFNSDRFNMDNYHLCISTQCQVYKPSKISNKNIQKAIEATSNL
CHHHHHHHHHHEEHHCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHCCCE
ILTYGNKPINAFYHGSNGGVSATAGESWQIQDYSYFNSIIDGSKSLNKFFKLPITNESDL
EEEECCCCEEEEEECCCCCEEECCCCCEEECCHHHHHHHHCCCHHHHHHEECCCCCCCCC
NNFLDFDKEQFYGSNHSLFRWKKKISSLEIKEKLIQNNLINVNDDVMDLNSIERGSSGRV
HHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCE
IKLEIQTDKVNKSIVLVKDDIRRVLNFIPSNLFTINKLSDDLWLLKGGGFGHGVGLSQSG
EEEEEEECCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCC
AIEMAKLGFSYEQILNHYYRDVKLKKIEILSQ
CEEHHHHCCCHHHHHHHHHHCCEEEEEEEECC
>Mature Secondary Structure
MKLKFAFLNLFLGCISLLTINTKFTANVKGEELLKVELNDEIKKGKFLIGLKQYLGGEND
CEEEHHHHHHHHHHHHHHEECCEEEECCCCCEEEEEEECCCCCCCEEEEEEHHHHCCCCC
SFSKKKNINFVTDKGFLNLISSNGIKYKSKQINISWVDIPIKNPKTIERIVFGPFASYES
CCCCCCCCEEEECCCHHHHHHCCCEEEECEEEEEEEEEEECCCCCHHHHEEECCCCCHHH
AKKQAEKLKNKGFETSVAYPKNWEVWIPFKGDLPDFELKNKISRKIKNYQITPVLRNEYS
HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEEEECCCEE
VMKLEGPIYIYAQEEIQINGVNFGKHFYLIKDSYGTWTLVQKIEFDEYLAGVLPYEIGPN
EEEECCCEEEEEECEEEEEEEEECCEEEEEECCCCCEEEEEEECHHHHHHCCCCCCCCCC
SPLEALKAQAVIARTWGIFNSDRFNMDNYHLCISTQCQVYKPSKISNKNIQKAIEATSNL
CHHHHHHHHHHEEHHCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHCCCE
ILTYGNKPINAFYHGSNGGVSATAGESWQIQDYSYFNSIIDGSKSLNKFFKLPITNESDL
EEEECCCCEEEEEECCCCCEEECCCCCEEECCHHHHHHHHCCCHHHHHHEECCCCCCCCC
NNFLDFDKEQFYGSNHSLFRWKKKISSLEIKEKLIQNNLINVNDDVMDLNSIERGSSGRV
HHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCE
IKLEIQTDKVNKSIVLVKDDIRRVLNFIPSNLFTINKLSDDLWLLKGGGFGHGVGLSQSG
EEEEEEECCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCC
AIEMAKLGFSYEQILNHYYRDVKLKKIEILSQ
CEEHHHHCCCHHHHHHHHHHCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA