| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126697170
Identifier: 126697170
GI number: 126697170
Start: 1554202
End: 1554633
Strand: Reverse
Name: 126697170
Synonym: P9301_18321
Alternate gene names: NA
Gene position: 1554633-1554202 (Counterclockwise)
Preceding gene: 126697171
Following gene: 126697168
Centisome position: 94.69
GC content: 32.18
Gene sequence:
>432_bases ATGACAAGAGTAATTTCTATTGAGGATTTAAAGGGATTATTTACTAAACCTTATGGTACGGATGCGCCAACAAAGCAAAA ATGGGCTGAATTTTATAATGAGAATGTTATTTTTATAGACCCAACTCAGGCAACAGAGGGCTTAGATTCTTATGTTAAAG CTCAAGAAAAGCTAGTTAAAAGATGTGATGATGTTTTTTTAGAAACTCATGCAATTTCCATAACTGGGGATTGTGGATTT GTTGAATGGACAATGGGTTTAAAAATTATGGGTAAAGAATTTATTTATCCTGGAACTACTCGTTTATTATTTGGTGAAAA TGGATTAATCAAAGAGCACAGAGATTACTTTGATTTTTGCGGACCAACTTTTGGACCAGTTCCTATTTTAGGACCTTTTA TAAGATGGATTTATAGTAAATTTGTATCTTGA
Upstream 100 bases:
>100_bases GTAGAGCATCTCCTTGCCAAGGAGAATGTCGAGAGTTCGAATCTCTTCATCCGCTTTTAATATTTGTATCCCTTAAAGTA TTTGTAATTAGCATATTGTA
Downstream 100 bases:
>100_bases TTTTGTTTCTCTAGAAACAAAGTGCTTTATATTTCACGAATCAATAAATTTTGAGAAGTAACTTCTTTAAATTCAAATTG AGAATAAAATAATTTCTTAT
Product: transcription regulator
Products: NA
Alternate protein names: Transcription Regulator
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTRVISIEDLKGLFTKPYGTDAPTKQKWAEFYNENVIFIDPTQATEGLDSYVKAQEKLVKRCDDVFLETHAISITGDCGF VEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFCGPTFGPVPILGPFIRWIYSKFVS
Sequences:
>Translated_143_residues MTRVISIEDLKGLFTKPYGTDAPTKQKWAEFYNENVIFIDPTQATEGLDSYVKAQEKLVKRCDDVFLETHAISITGDCGF VEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFCGPTFGPVPILGPFIRWIYSKFVS >Mature_142_residues TRVISIEDLKGLFTKPYGTDAPTKQKWAEFYNENVIFIDPTQATEGLDSYVKAQEKLVKRCDDVFLETHAISITGDCGFV EWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFCGPTFGPVPILGPFIRWIYSKFVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16349; Mature: 16218
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVISIEDLKGLFTKPYGTDAPTKQKWAEFYNENVIFIDPTQATEGLDSYVKAQEKLVK CCEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH RCDDVFLETHAISITGDCGFVEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFC HHHHHHHHHEEEEEECCCCEEEHCCCEEEECCEEECCCCEEEEECCCCCCHHHHHHHHHC GPTFGPVPILGPFIRWIYSKFVS CCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRVISIEDLKGLFTKPYGTDAPTKQKWAEFYNENVIFIDPTQATEGLDSYVKAQEKLVK CEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH RCDDVFLETHAISITGDCGFVEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFC HHHHHHHHHEEEEEECCCCEEEHCCCEEEECCEEECCCCEEEEECCCCCCHHHHHHHHHC GPTFGPVPILGPFIRWIYSKFVS CCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA