| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126697103
Identifier: 126697103
GI number: 126697103
Start: 1486812
End: 1487258
Strand: Reverse
Name: 126697103
Synonym: P9301_17651
Alternate gene names: NA
Gene position: 1487258-1486812 (Counterclockwise)
Preceding gene: 126697104
Following gene: 126697102
Centisome position: 90.58
GC content: 31.1
Gene sequence:
>447_bases TTGCAATATTTTTCTAAAAAAAAACTTGTTCTTCCAGAAGGTTATTTTGTTAATTCTTCTCAAATCCCCTTAGCTAAAGA AGTTAACAAACTTTTAGCCAATTGTGGTTGCGAGACATTTCCAATTAAGCCACTTTCTGAGGCTATTAAGAAAAGTAATT TCTTTTTTACCATACAGAGTGAATTAAAAAATAAATTATATGGCTTTGTAAGGGTTACGTCCGATAAGGGATTGAATGCT AACTTATGGAATTTAAGCGCATTGCCAGGGAAAAATCAGCAAATTTATTATTCAATATTGCTTCAAGTAACTCTTGAGAA AATAAATAGAGAAATGCCAGGATGTAGTATTTCTGTACAGGCTCCAGTATCTTCTTTTATAAGTTTAGAGGAAAATGGAT TCATACTAGATCCCAATGGAATAAGAGTAATGGGATATAAACTTTAA
Upstream 100 bases:
>100_bases GGACGAATCCAGAAGAGCTTACAGCAGAAGTGAACTATTAAGGGGTGCACTTTTAACTATTAATGGGATAGCAGCTGGCA TGAGAAATACAGGTTGATAA
Downstream 100 bases:
>100_bases AAATCATTTTACGAGCATGGAGGGATTCGAACCCCCGACTCTCAGAACCGGAATCTGATGCTCTATCCAACTGAGCTACA TGCCCTTTAATTTTTCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MQYFSKKKLVLPEGYFVNSSQIPLAKEVNKLLANCGCETFPIKPLSEAIKKSNFFFTIQSELKNKLYGFVRVTSDKGLNA NLWNLSALPGKNQQIYYSILLQVTLEKINREMPGCSISVQAPVSSFISLEENGFILDPNGIRVMGYKL
Sequences:
>Translated_148_residues MQYFSKKKLVLPEGYFVNSSQIPLAKEVNKLLANCGCETFPIKPLSEAIKKSNFFFTIQSELKNKLYGFVRVTSDKGLNA NLWNLSALPGKNQQIYYSILLQVTLEKINREMPGCSISVQAPVSSFISLEENGFILDPNGIRVMGYKL >Mature_148_residues MQYFSKKKLVLPEGYFVNSSQIPLAKEVNKLLANCGCETFPIKPLSEAIKKSNFFFTIQSELKNKLYGFVRVTSDKGLNA NLWNLSALPGKNQQIYYSILLQVTLEKINREMPGCSISVQAPVSSFISLEENGFILDPNGIRVMGYKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16647; Mature: 16647
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYFSKKKLVLPEGYFVNSSQIPLAKEVNKLLANCGCETFPIKPLSEAIKKSNFFFTIQS CCCCCCCCEECCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEEEEEHH ELKNKLYGFVRVTSDKGLNANLWNLSALPGKNQQIYYSILLQVTLEKINREMPGCSISVQ HHHHHHEEEEEEECCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEE APVSSFISLEENGFILDPNGIRVMGYKL CCHHHHEEECCCCEEECCCCEEEEEEEC >Mature Secondary Structure MQYFSKKKLVLPEGYFVNSSQIPLAKEVNKLLANCGCETFPIKPLSEAIKKSNFFFTIQS CCCCCCCCEECCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEEEEEHH ELKNKLYGFVRVTSDKGLNANLWNLSALPGKNQQIYYSILLQVTLEKINREMPGCSISVQ HHHHHHEEEEEEECCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEE APVSSFISLEENGFILDPNGIRVMGYKL CCHHHHEEECCCCEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA