| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126697056
Identifier: 126697056
GI number: 126697056
Start: 1453287
End: 1454075
Strand: Direct
Name: 126697056
Synonym: P9301_17181
Alternate gene names: NA
Gene position: 1453287-1454075 (Clockwise)
Preceding gene: 126697055
Following gene: 126697058
Centisome position: 88.51
GC content: 31.31
Gene sequence:
>789_bases TTGAAAAATATTGGTTTAATTTTGTTTGACATTGATGGGGTAATTCGCAGCGTAGAAAATAGTTACAGACTTTCATTAAA AAAAACAGTTTACAAATTTTCCGGATGGGAGCCAAGTTATATCGATATTGATAATGCAAAAAATGAAGGGATCTGGAATA ATGACTGGGATTTAAGTTTAGAACTTATAAAAAGATATATAAAAAAAGAGAACTTAAATCTCAAAATTCCTCCAAGAGAG GAAATAGTAAAGTGTTTTGAAGAGTTTTACTTTGGTGGAGATCCAAATAAAGATAGTAAATATTGGTCTGGTTACATTGC AAATGAGAAGTTATTAGTTGATAAAAAGTTTTTTGATTTAATTCAAGGTAAAGGAATAATCTGGGGTTTTGTTAGTGGTG CAGAGTCTGCTTCTGCAAAATTTGTTTTAGAAAAAAGACTTGGACTAAAATCACCACCATTAATATCTATGGGAGATGCC CCTGACAAGCCTGATCCAAGAGGTTTTATTAACTTATCAAAAAAGCTTGTTGGAGATAAACTTGGCGAATCAAATATTCC CATTGCATATGTAGGAGATACTATTGCAGATATAAATACAGTTATGAACGCTAGAAAGGAAATACCATCTCAGAAATTCA TCAGTATCGGAATAGCTCCACCTCATTTACATGTAGATTCTCTATTAGAAGAACGTAATTCTTACGAAACAAATCTAAGG AGTGCAGGCGCTGACTTGATTTTAAATTCTATTTATGACCTTAAAGATATTAATCTTGAATTATTTTAA
Upstream 100 bases:
>100_bases TTAAGTTTAGGTAATTGATAATTTTATAAATAGAATTTTTTTCTTTGCTTTTTCTTTATAAGAATACTAATCTTTGATAA TAATGATGCAATAAAAAAAA
Downstream 100 bases:
>100_bases AACAAATATTAATTAAAAATTTTCTAAATAAATCACGGAGAGGGAGGGATTCGAACCCTCGACAAAAGTTACCTCCTGTA ACTCCTTAGCAGGGAGCCGC
Product: putative imidazoleglycerol-phosphate dehydratase
Products: 3-(imidazol-4-yl)-2-oxopropyl phosphate; H2O
Alternate protein names: HAD Family Hydrolase; HAD Superfamily Hydrolase; HAD Superfamily Phosphatase; HAD Superfamily Hydrolase TIGR
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKNIGLILFDIDGVIRSVENSYRLSLKKTVYKFSGWEPSYIDIDNAKNEGIWNNDWDLSLELIKRYIKKENLNLKIPPRE EIVKCFEEFYFGGDPNKDSKYWSGYIANEKLLVDKKFFDLIQGKGIIWGFVSGAESASAKFVLEKRLGLKSPPLISMGDA PDKPDPRGFINLSKKLVGDKLGESNIPIAYVGDTIADINTVMNARKEIPSQKFISIGIAPPHLHVDSLLEERNSYETNLR SAGADLILNSIYDLKDINLELF
Sequences:
>Translated_262_residues MKNIGLILFDIDGVIRSVENSYRLSLKKTVYKFSGWEPSYIDIDNAKNEGIWNNDWDLSLELIKRYIKKENLNLKIPPRE EIVKCFEEFYFGGDPNKDSKYWSGYIANEKLLVDKKFFDLIQGKGIIWGFVSGAESASAKFVLEKRLGLKSPPLISMGDA PDKPDPRGFINLSKKLVGDKLGESNIPIAYVGDTIADINTVMNARKEIPSQKFISIGIAPPHLHVDSLLEERNSYETNLR SAGADLILNSIYDLKDINLELF >Mature_262_residues MKNIGLILFDIDGVIRSVENSYRLSLKKTVYKFSGWEPSYIDIDNAKNEGIWNNDWDLSLELIKRYIKKENLNLKIPPRE EIVKCFEEFYFGGDPNKDSKYWSGYIANEKLLVDKKFFDLIQGKGIIWGFVSGAESASAKFVLEKRLGLKSPPLISMGDA PDKPDPRGFINLSKKLVGDKLGESNIPIAYVGDTIADINTVMNARKEIPSQKFISIGIAPPHLHVDSLLEERNSYETNLR SAGADLILNSIYDLKDINLELF
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.19
Molecular weight: Translated: 29652; Mature: 29652
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIGLILFDIDGVIRSVENSYRLSLKKTVYKFSGWEPSYIDIDNAKNEGIWNNDWDLSL CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCEEH ELIKRYIKKENLNLKIPPREEIVKCFEEFYFGGDPNKDSKYWSGYIANEKLLVDKKFFDL HHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEHHHHHHH IQGKGIIWGFVSGAESASAKFVLEKRLGLKSPPLISMGDAPDKPDPRGFINLSKKLVGDK HCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH LGESNIPIAYVGDTIADINTVMNARKEIPSQKFISIGIAPPHLHVDSLLEERNSYETNLR CCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH SAGADLILNSIYDLKDINLELF HCCHHHHHHHHHCCCCCCEEEC >Mature Secondary Structure MKNIGLILFDIDGVIRSVENSYRLSLKKTVYKFSGWEPSYIDIDNAKNEGIWNNDWDLSL CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCEEH ELIKRYIKKENLNLKIPPREEIVKCFEEFYFGGDPNKDSKYWSGYIANEKLLVDKKFFDL HHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEHHHHHHH IQGKGIIWGFVSGAESASAKFVLEKRLGLKSPPLISMGDAPDKPDPRGFINLSKKLVGDK HCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH LGESNIPIAYVGDTIADINTVMNARKEIPSQKFISIGIAPPHLHVDSLLEERNSYETNLR CCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH SAGADLILNSIYDLKDINLELF HCCHHHHHHHHHCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate
Specific reaction: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA