| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is 126697047
Identifier: 126697047
GI number: 126697047
Start: 1442474
End: 1443382
Strand: Reverse
Name: 126697047
Synonym: P9301_17091
Alternate gene names: NA
Gene position: 1443382-1442474 (Counterclockwise)
Preceding gene: 126697049
Following gene: 126697044
Centisome position: 87.91
GC content: 30.14
Gene sequence:
>909_bases ATGTCCTTTTACTATTTAAGTCAAGAGATGGGTTTAGCCTTAAATGATATTTTAAGGAGAGTATGCTCTCATAATAAAGA TTTTTCAAGAGAAGATATTTCGATAACTTGGATTAATTATAAAAGTGAAAATAAAATTGTATTTAAAGGTTTTGGAACTG GTATTAATAACAAAAAAATGGTTTACCCAGCCAGCATAGTCAAGCTAGTTTATGGCCTTGCTGCATTTTATTGGATTAAA AAAGGAAGTTTATTATTATCAGATGAAATTATTGATGCTGTAAGGAAAATGTTGTCTCTCTCCAGTAATAATGCAACAAG CTTTTTAATTGATCTACTTACTGGAACAACAAGTGGACCTCGTATTGAAGGCGAACTATGGGAAAATTGGCTATACCAAA GAAGTATAATAAATGATTGGCTACATGATTTAAATTGGGAAGAATTGGTTGGTATAAATTGCTGTCAGAAGACTTGGGAT GATGGACCATTTGGTCGTGAGAAAGAATTTTATGGAAATGATAATAAAAATAGAAATGCTATGAACTCTGATTCAGCTGC AAGGGTTTTGGAGGAAATTATGATTCATATTGATTATCAAGAAAATAATTTAAATTTGCGAAGTTTTTTAAAAAGAAATT TAAATAAATTTGTTCTTAAAAACGATTCTCTTAATCAAATAGATGGTTTTTTGGGTGAAGGATTACCAGAAAGTATTAAT CTTTGGAGTAAAGCAGGCTTAATGTCAGAAGTTAGACATGATTCAGCTTGGTGGATTAATAATCAATCTCTACAAACTTT ATTGGTAGTTTTTTGTAATGGAGAACAATATTCCAAAGATTCTTCCCTTTTACCGTTTATCGCAAGAGAAGTATACGAAT TTAATAAGAGATATCCTATTAAGGACTAA
Upstream 100 bases:
>100_bases TTTGATATCCAGAAATATTAACTTTTAATTTCCACCAAATAGTTTTTGAAAAATTAGTTTGTTTAAATAGTGAGATAGGA TTTTTATAAATTGCCATACA
Downstream 100 bases:
>100_bases AGTGAATCTTCTAAGAAATTAGAATCTAATTTGTCAGTATAGGCTTCATAAGGTAGCATCATTACTTCTTCAAAATCTAT ATCATTCATAATCCACTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSFYYLSQEMGLALNDILRRVCSHNKDFSREDISITWINYKSENKIVFKGFGTGINNKKMVYPASIVKLVYGLAAFYWIK KGSLLLSDEIIDAVRKMLSLSSNNATSFLIDLLTGTTSGPRIEGELWENWLYQRSIINDWLHDLNWEELVGINCCQKTWD DGPFGREKEFYGNDNKNRNAMNSDSAARVLEEIMIHIDYQENNLNLRSFLKRNLNKFVLKNDSLNQIDGFLGEGLPESIN LWSKAGLMSEVRHDSAWWINNQSLQTLLVVFCNGEQYSKDSSLLPFIAREVYEFNKRYPIKD
Sequences:
>Translated_302_residues MSFYYLSQEMGLALNDILRRVCSHNKDFSREDISITWINYKSENKIVFKGFGTGINNKKMVYPASIVKLVYGLAAFYWIK KGSLLLSDEIIDAVRKMLSLSSNNATSFLIDLLTGTTSGPRIEGELWENWLYQRSIINDWLHDLNWEELVGINCCQKTWD DGPFGREKEFYGNDNKNRNAMNSDSAARVLEEIMIHIDYQENNLNLRSFLKRNLNKFVLKNDSLNQIDGFLGEGLPESIN LWSKAGLMSEVRHDSAWWINNQSLQTLLVVFCNGEQYSKDSSLLPFIAREVYEFNKRYPIKD >Mature_301_residues SFYYLSQEMGLALNDILRRVCSHNKDFSREDISITWINYKSENKIVFKGFGTGINNKKMVYPASIVKLVYGLAAFYWIKK GSLLLSDEIIDAVRKMLSLSSNNATSFLIDLLTGTTSGPRIEGELWENWLYQRSIINDWLHDLNWEELVGINCCQKTWDD GPFGREKEFYGNDNKNRNAMNSDSAARVLEEIMIHIDYQENNLNLRSFLKRNLNKFVLKNDSLNQIDGFLGEGLPESINL WSKAGLMSEVRHDSAWWINNQSLQTLLVVFCNGEQYSKDSSLLPFIAREVYEFNKRYPIKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34991; Mature: 34860
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYYLSQEMGLALNDILRRVCSHNKDFSREDISITWINYKSENKIVFKGFGTGINNKKM CCEEEECHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCEE VYPASIVKLVYGLAAFYWIKKGSLLLSDEIIDAVRKMLSLSSNNATSFLIDLLTGTTSGP ECHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC RIEGELWENWLYQRSIINDWLHDLNWEELVGINCCQKTWDDGPFGREKEFYGNDNKNRNA EECHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC MNSDSAARVLEEIMIHIDYQENNLNLRSFLKRNLNKFVLKNDSLNQIDGFLGEGLPESIN CCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHCHHHEEECCCCHHHHHHHHCCCCCHHHH LWSKAGLMSEVRHDSAWWINNQSLQTLLVVFCNGEQYSKDSSLLPFIAREVYEFNKRYPI HHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC KD CC >Mature Secondary Structure SFYYLSQEMGLALNDILRRVCSHNKDFSREDISITWINYKSENKIVFKGFGTGINNKKM CEEEECHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCEE VYPASIVKLVYGLAAFYWIKKGSLLLSDEIIDAVRKMLSLSSNNATSFLIDLLTGTTSGP ECHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC RIEGELWENWLYQRSIINDWLHDLNWEELVGINCCQKTWDDGPFGREKEFYGNDNKNRNA EECHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC MNSDSAARVLEEIMIHIDYQENNLNLRSFLKRNLNKFVLKNDSLNQIDGFLGEGLPESIN CCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHCHHHEEECCCCHHHHHHHHCCCCCHHHH LWSKAGLMSEVRHDSAWWINNQSLQTLLVVFCNGEQYSKDSSLLPFIAREVYEFNKRYPI HHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC KD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA