Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is 126697027

Identifier: 126697027

GI number: 126697027

Start: 1421697

End: 1423316

Strand: Direct

Name: 126697027

Synonym: P9301_16891

Alternate gene names: NA

Gene position: 1421697-1423316 (Clockwise)

Preceding gene: 126697026

Following gene: 126697030

Centisome position: 86.59

GC content: 34.07

Gene sequence:

>1620_bases
ATGAATTTTAATTTGAAGTTTGAAAAATTAAATAAAAAAAATTACCAAAGAAAGCACTATGGCAAAATACTAACTGTAAG
ATTGCCATGTAATCCAATATTTCCAATAGGACCTATTTATTTAGCAGACCATATTCATAAATGTTTTCCAGATTTAGAGC
AGCAGTTCATTGATCTAGCAATAATTCCATCTAATAAAGTTTCCAAATGTTTAGCTAGAAAAATTGATCAATTTAGACCT
CATCTAATCATTTTTTCATGGAGAGATATACAAATTTATGCACCTGTTGATGGTAGAAGTGGAAATCCCCTACAAAACTC
TTTTGAAGTTTTCTACTCAAAAAATATACTTAAAAAAATTAGAGGTTCCTGGGGAGGATTAAAATTAATTGCATCGCATT
ATGGAGAAATATATAGAAATACTTCTTTAGTCAAGATGGGACTAAAAAGAGCACAAAAATATAATAAAAATATAAAAGTA
ATCTTAGGAGGCGGGGCTGTTAGTGTCTTCTATGAACAATTGGGAAATCTCCTCCCAAAAGGAACTGTTATTTCAGTTGG
AGAGGGAGAAAATCTCATAGAAAAAATAATTAAAGGAGATTCAATAGAAGAAGAAAGATGTTACGTTGCCGGACAAAAAC
CTCGGAGCAAATTAATACATGAACAACCCTCAGGCACTGTTAAAACTGCCTGCGACTATAAATACATTAAATCAAAATGG
CCTGAATTTGATTGGTATATAGAAGGTGGCGAATATTACGTAGGGGTACAAACAAAAAGAGGTTGTCCTCATAATTGTTG
TTTCTGTGTTTACACAGTTGTGGAGGGGAAGCAGGTTCGCGTTAATCCTGTTAAGGAAGTAATCAGTGAAATGAAGCAAT
TATATGATCTTGGAGTAAGGGGATTTTGGTTCACAGATGCACAGTTTATTCCAGCCAAAAAACATATTGAAGATGCTAAA
ACACTTTTGCAAGCAATTAAGGACCAAGGCTGGGACGATATTAATTGGGCCGCATACATCAGAGCAGATAATATTGATGC
TGAGCTTGCTCAGCTTATGGTTGATACAGGTATGAGCTATTTTGAAATAGGTATCACCTCGGGATCTCAAGAACTTGTTA
GAAAAATGAGATTAGCTTATGACCTTGAAACTGTATTAAATAATTGCAGAATGCTTGTTAAATCAGGTTTCAAGAATCAT
GTTTCAGTCAATTATTCATTTAATGTTTTTGATGAAACGCCCAGCACCATAAGACAAACAATTGCTTACCATAGAGAATT
AGAAAATATTTTTGGTAAAGGCTTAGTTGATCCAGCTATATTTTTTATAGGTTTGCAACCTCACACTCTTCTTGAGAAGT
ACGCTTTGGAGCATAAAATTTTGAAGCCAAATTATAATCCAATGAGCATGATGCCCTGGACAGCTAGAAAACTTCTTTGG
AATCCAGGCTCACTAGGTAAGAAGCTTGGCCAGGTTTGCTTAGAAGCTTTTGATAATACAGAAGACGAATTTGGTAAAAC
AGTTATCGATATTCTTGAGAGAGACTATGGAAAGTCTTCCTTAAAAGAATCCCTTAAAGTCCGTCCTTTATCAGAAAGAA
AATTAGCTCACTCTAAATAA

Upstream 100 bases:

>100_bases
TAAAATCTTCGCAAGTATTTTCTTAGGATTTTTAATTTCTCCAAATTAGTAATAAAGTAGTTAGATTCTTAACAGAAATA
AATTCATTAAATTTCATAAC

Downstream 100 bases:

>100_bases
TAAATACAACAGTTCTTAATCCTCTTTCTCAATTGAACTAGAAATTCCCTTAGATTTTAATGATTCTGAGTAGAATTCTG
CTGGCTCTAAATCACAAACA

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLAIIPSNKVSKCLARKIDQFRP
HLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKIRGSWGGLKLIASHYGEIYRNTSLVKMGLKRAQKYNKNIKV
ILGGGAVSVFYEQLGNLLPKGTVISVGEGENLIEKIIKGDSIEEERCYVAGQKPRSKLIHEQPSGTVKTACDYKYIKSKW
PEFDWYIEGGEYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVISEMKQLYDLGVRGFWFTDAQFIPAKKHIEDAK
TLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSYFEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNH
VSVNYSFNVFDETPSTIRQTIAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW
NPGSLGKKLGQVCLEAFDNTEDEFGKTVIDILERDYGKSSLKESLKVRPLSERKLAHSK

Sequences:

>Translated_539_residues
MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLAIIPSNKVSKCLARKIDQFRP
HLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKIRGSWGGLKLIASHYGEIYRNTSLVKMGLKRAQKYNKNIKV
ILGGGAVSVFYEQLGNLLPKGTVISVGEGENLIEKIIKGDSIEEERCYVAGQKPRSKLIHEQPSGTVKTACDYKYIKSKW
PEFDWYIEGGEYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVISEMKQLYDLGVRGFWFTDAQFIPAKKHIEDAK
TLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSYFEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNH
VSVNYSFNVFDETPSTIRQTIAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW
NPGSLGKKLGQVCLEAFDNTEDEFGKTVIDILERDYGKSSLKESLKVRPLSERKLAHSK
>Mature_539_residues
MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLAIIPSNKVSKCLARKIDQFRP
HLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKIRGSWGGLKLIASHYGEIYRNTSLVKMGLKRAQKYNKNIKV
ILGGGAVSVFYEQLGNLLPKGTVISVGEGENLIEKIIKGDSIEEERCYVAGQKPRSKLIHEQPSGTVKTACDYKYIKSKW
PEFDWYIEGGEYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVISEMKQLYDLGVRGFWFTDAQFIPAKKHIEDAK
TLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSYFEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNH
VSVNYSFNVFDETPSTIRQTIAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW
NPGSLGKKLGQVCLEAFDNTEDEFGKTVIDILERDYGKSSLKESLKVRPLSERKLAHSK

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 61763; Mature: 61763

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLA
CCCCCCHHHHCCHHCCHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEE
IIPSNKVSKCLARKIDQFRPHLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKI
EECCHHHHHHHHHHHHHCCCCEEEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
RGSWGGLKLIASHYGEIYRNTSLVKMGLKRAQKYNKNIKVILGGGAVSVFYEQLGNLLPK
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCC
GTVISVGEGENLIEKIIKGDSIEEERCYVAGQKPRSKLIHEQPSGTVKTACDYKYIKSKW
CCEEEECCCHHHHHHHHCCCCCCCCHHEECCCCHHHHHCCCCCCCCEEHHCCHHHHHHCC
PEFDWYIEGGEYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVISEMKQLYDLGVR
CCCEEEEECCEEEEEEEECCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCC
GFWFTDAQFIPAKKHIEDAKTLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSY
EEEECCCEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCE
FEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNHVSVNYSFNVFDETPSTIRQT
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHH
IAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHC
NPGSLGKKLGQVCLEAFDNTEDEFGKTVIDILERDYGKSSLKESLKVRPLSERKLAHSK
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLA
CCCCCCHHHHCCHHCCHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEE
IIPSNKVSKCLARKIDQFRPHLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKI
EECCHHHHHHHHHHHHHCCCCEEEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
RGSWGGLKLIASHYGEIYRNTSLVKMGLKRAQKYNKNIKVILGGGAVSVFYEQLGNLLPK
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCC
GTVISVGEGENLIEKIIKGDSIEEERCYVAGQKPRSKLIHEQPSGTVKTACDYKYIKSKW
CCEEEECCCHHHHHHHHCCCCCCCCHHEECCCCHHHHHCCCCCCCCEEHHCCHHHHHHCC
PEFDWYIEGGEYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVISEMKQLYDLGVR
CCCEEEEECCEEEEEEEECCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCC
GFWFTDAQFIPAKKHIEDAKTLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSY
EEEECCCEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCE
FEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNHVSVNYSFNVFDETPSTIRQT
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHH
IAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHC
NPGSLGKKLGQVCLEAFDNTEDEFGKTVIDILERDYGKSSLKESLKVRPLSERKLAHSK
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]