| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126697027
Identifier: 126697027
GI number: 126697027
Start: 1421697
End: 1423316
Strand: Direct
Name: 126697027
Synonym: P9301_16891
Alternate gene names: NA
Gene position: 1421697-1423316 (Clockwise)
Preceding gene: 126697026
Following gene: 126697030
Centisome position: 86.59
GC content: 34.07
Gene sequence:
>1620_bases ATGAATTTTAATTTGAAGTTTGAAAAATTAAATAAAAAAAATTACCAAAGAAAGCACTATGGCAAAATACTAACTGTAAG ATTGCCATGTAATCCAATATTTCCAATAGGACCTATTTATTTAGCAGACCATATTCATAAATGTTTTCCAGATTTAGAGC AGCAGTTCATTGATCTAGCAATAATTCCATCTAATAAAGTTTCCAAATGTTTAGCTAGAAAAATTGATCAATTTAGACCT CATCTAATCATTTTTTCATGGAGAGATATACAAATTTATGCACCTGTTGATGGTAGAAGTGGAAATCCCCTACAAAACTC TTTTGAAGTTTTCTACTCAAAAAATATACTTAAAAAAATTAGAGGTTCCTGGGGAGGATTAAAATTAATTGCATCGCATT ATGGAGAAATATATAGAAATACTTCTTTAGTCAAGATGGGACTAAAAAGAGCACAAAAATATAATAAAAATATAAAAGTA ATCTTAGGAGGCGGGGCTGTTAGTGTCTTCTATGAACAATTGGGAAATCTCCTCCCAAAAGGAACTGTTATTTCAGTTGG AGAGGGAGAAAATCTCATAGAAAAAATAATTAAAGGAGATTCAATAGAAGAAGAAAGATGTTACGTTGCCGGACAAAAAC CTCGGAGCAAATTAATACATGAACAACCCTCAGGCACTGTTAAAACTGCCTGCGACTATAAATACATTAAATCAAAATGG CCTGAATTTGATTGGTATATAGAAGGTGGCGAATATTACGTAGGGGTACAAACAAAAAGAGGTTGTCCTCATAATTGTTG TTTCTGTGTTTACACAGTTGTGGAGGGGAAGCAGGTTCGCGTTAATCCTGTTAAGGAAGTAATCAGTGAAATGAAGCAAT TATATGATCTTGGAGTAAGGGGATTTTGGTTCACAGATGCACAGTTTATTCCAGCCAAAAAACATATTGAAGATGCTAAA ACACTTTTGCAAGCAATTAAGGACCAAGGCTGGGACGATATTAATTGGGCCGCATACATCAGAGCAGATAATATTGATGC TGAGCTTGCTCAGCTTATGGTTGATACAGGTATGAGCTATTTTGAAATAGGTATCACCTCGGGATCTCAAGAACTTGTTA GAAAAATGAGATTAGCTTATGACCTTGAAACTGTATTAAATAATTGCAGAATGCTTGTTAAATCAGGTTTCAAGAATCAT GTTTCAGTCAATTATTCATTTAATGTTTTTGATGAAACGCCCAGCACCATAAGACAAACAATTGCTTACCATAGAGAATT AGAAAATATTTTTGGTAAAGGCTTAGTTGATCCAGCTATATTTTTTATAGGTTTGCAACCTCACACTCTTCTTGAGAAGT ACGCTTTGGAGCATAAAATTTTGAAGCCAAATTATAATCCAATGAGCATGATGCCCTGGACAGCTAGAAAACTTCTTTGG AATCCAGGCTCACTAGGTAAGAAGCTTGGCCAGGTTTGCTTAGAAGCTTTTGATAATACAGAAGACGAATTTGGTAAAAC AGTTATCGATATTCTTGAGAGAGACTATGGAAAGTCTTCCTTAAAAGAATCCCTTAAAGTCCGTCCTTTATCAGAAAGAA AATTAGCTCACTCTAAATAA
Upstream 100 bases:
>100_bases TAAAATCTTCGCAAGTATTTTCTTAGGATTTTTAATTTCTCCAAATTAGTAATAAAGTAGTTAGATTCTTAACAGAAATA AATTCATTAAATTTCATAAC
Downstream 100 bases:
>100_bases TAAATACAACAGTTCTTAATCCTCTTTCTCAATTGAACTAGAAATTCCCTTAGATTTTAATGATTCTGAGTAGAATTCTG CTGGCTCTAAATCACAAACA
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLAIIPSNKVSKCLARKIDQFRP HLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKIRGSWGGLKLIASHYGEIYRNTSLVKMGLKRAQKYNKNIKV ILGGGAVSVFYEQLGNLLPKGTVISVGEGENLIEKIIKGDSIEEERCYVAGQKPRSKLIHEQPSGTVKTACDYKYIKSKW PEFDWYIEGGEYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVISEMKQLYDLGVRGFWFTDAQFIPAKKHIEDAK TLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSYFEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNH VSVNYSFNVFDETPSTIRQTIAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW NPGSLGKKLGQVCLEAFDNTEDEFGKTVIDILERDYGKSSLKESLKVRPLSERKLAHSK
Sequences:
>Translated_539_residues MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLAIIPSNKVSKCLARKIDQFRP HLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKIRGSWGGLKLIASHYGEIYRNTSLVKMGLKRAQKYNKNIKV ILGGGAVSVFYEQLGNLLPKGTVISVGEGENLIEKIIKGDSIEEERCYVAGQKPRSKLIHEQPSGTVKTACDYKYIKSKW PEFDWYIEGGEYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVISEMKQLYDLGVRGFWFTDAQFIPAKKHIEDAK TLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSYFEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNH VSVNYSFNVFDETPSTIRQTIAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW NPGSLGKKLGQVCLEAFDNTEDEFGKTVIDILERDYGKSSLKESLKVRPLSERKLAHSK >Mature_539_residues MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLAIIPSNKVSKCLARKIDQFRP HLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKIRGSWGGLKLIASHYGEIYRNTSLVKMGLKRAQKYNKNIKV ILGGGAVSVFYEQLGNLLPKGTVISVGEGENLIEKIIKGDSIEEERCYVAGQKPRSKLIHEQPSGTVKTACDYKYIKSKW PEFDWYIEGGEYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVISEMKQLYDLGVRGFWFTDAQFIPAKKHIEDAK TLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSYFEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNH VSVNYSFNVFDETPSTIRQTIAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW NPGSLGKKLGQVCLEAFDNTEDEFGKTVIDILERDYGKSSLKESLKVRPLSERKLAHSK
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 61763; Mature: 61763
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLA CCCCCCHHHHCCHHCCHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEE IIPSNKVSKCLARKIDQFRPHLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKI EECCHHHHHHHHHHHHHCCCCEEEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH RGSWGGLKLIASHYGEIYRNTSLVKMGLKRAQKYNKNIKVILGGGAVSVFYEQLGNLLPK CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCC GTVISVGEGENLIEKIIKGDSIEEERCYVAGQKPRSKLIHEQPSGTVKTACDYKYIKSKW CCEEEECCCHHHHHHHHCCCCCCCCHHEECCCCHHHHHCCCCCCCCEEHHCCHHHHHHCC PEFDWYIEGGEYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVISEMKQLYDLGVR CCCEEEEECCEEEEEEEECCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCC GFWFTDAQFIPAKKHIEDAKTLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSY EEEECCCEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCE FEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNHVSVNYSFNVFDETPSTIRQT EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHH IAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHC NPGSLGKKLGQVCLEAFDNTEDEFGKTVIDILERDYGKSSLKESLKVRPLSERKLAHSK CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCCC >Mature Secondary Structure MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLA CCCCCCHHHHCCHHCCHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEE IIPSNKVSKCLARKIDQFRPHLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNILKKI EECCHHHHHHHHHHHHHCCCCEEEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH RGSWGGLKLIASHYGEIYRNTSLVKMGLKRAQKYNKNIKVILGGGAVSVFYEQLGNLLPK CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCC GTVISVGEGENLIEKIIKGDSIEEERCYVAGQKPRSKLIHEQPSGTVKTACDYKYIKSKW CCEEEECCCHHHHHHHHCCCCCCCCHHEECCCCHHHHHCCCCCCCCEEHHCCHHHHHHCC PEFDWYIEGGEYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPVKEVISEMKQLYDLGVR CCCEEEEECCEEEEEEEECCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCC GFWFTDAQFIPAKKHIEDAKTLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSY EEEECCCEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCE FEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNHVSVNYSFNVFDETPSTIRQT EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHH IAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHC NPGSLGKKLGQVCLEAFDNTEDEFGKTVIDILERDYGKSSLKESLKVRPLSERKLAHSK CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]