| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is 126697022
Identifier: 126697022
GI number: 126697022
Start: 1415967
End: 1416239
Strand: Direct
Name: 126697022
Synonym: P9301_16841
Alternate gene names: NA
Gene position: 1415967-1416239 (Clockwise)
Preceding gene: 126697021
Following gene: 126697023
Centisome position: 86.24
GC content: 30.4
Gene sequence:
>273_bases GTGATACAACAAAATCCTGTTTTGCGTATGTGCATTTCATGTAGAAAGACATATGACAGGAAAGATCTTTTAAAGATTAC TAAAGATCATAAGCAAGGCATCATTCTTCAAAAGGGAATGGGGAGATCAGCTTACATTTGCAAGTCAAAAAAATGCTACT CAGATTCAAAGATTAAAAAAAAGCTTCAAAAAGCTTTAAAAACATTTTTGGAACCTGAATTTGTTGAAATTTTTGAAAAA GAAATTACAAGCTACAATAACTATCCCCATTAA
Upstream 100 bases:
>100_bases AATATGGAGAGGAACAATACGAAGGAGAAGAATTAACAGATAATGATCCATTAGAGACTCTTCAAGATACTGACATATCT GCCAAAGAGGAGAAAAAACG
Downstream 100 bases:
>100_bases GGGAATATAATTAAATTAAATCCTCTTCTATTTCAAAAGAGTACAAATCAGATTAAATGACTATCAGCGATAAAATCAGA ATTTACGAACTTTCCAGAGA
Product: nucleic-acid-binding protein implicated in transcription termination
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MIQQNPVLRMCISCRKTYDRKDLLKITKDHKQGIILQKGMGRSAYICKSKKCYSDSKIKKKLQKALKTFLEPEFVEIFEK EITSYNNYPH
Sequences:
>Translated_90_residues MIQQNPVLRMCISCRKTYDRKDLLKITKDHKQGIILQKGMGRSAYICKSKKCYSDSKIKKKLQKALKTFLEPEFVEIFEK EITSYNNYPH >Mature_90_residues MIQQNPVLRMCISCRKTYDRKDLLKITKDHKQGIILQKGMGRSAYICKSKKCYSDSKIKKKLQKALKTFLEPEFVEIFEK EITSYNNYPH
Specific function: Unknown
COG id: COG2740
COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10661; Mature: 10661
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQQNPVLRMCISCRKTYDRKDLLKITKDHKQGIILQKGMGRSAYICKSKKCYSDSKIKK CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCCCCEEHCCCCCCCCHHHHHH KLQKALKTFLEPEFVEIFEKEITSYNNYPH HHHHHHHHHCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIQQNPVLRMCISCRKTYDRKDLLKITKDHKQGIILQKGMGRSAYICKSKKCYSDSKIKK CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCCCCEEHCCCCCCCCHHHHHH KLQKALKTFLEPEFVEIFEKEITSYNNYPH HHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA