Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is 126697022

Identifier: 126697022

GI number: 126697022

Start: 1415967

End: 1416239

Strand: Direct

Name: 126697022

Synonym: P9301_16841

Alternate gene names: NA

Gene position: 1415967-1416239 (Clockwise)

Preceding gene: 126697021

Following gene: 126697023

Centisome position: 86.24

GC content: 30.4

Gene sequence:

>273_bases
GTGATACAACAAAATCCTGTTTTGCGTATGTGCATTTCATGTAGAAAGACATATGACAGGAAAGATCTTTTAAAGATTAC
TAAAGATCATAAGCAAGGCATCATTCTTCAAAAGGGAATGGGGAGATCAGCTTACATTTGCAAGTCAAAAAAATGCTACT
CAGATTCAAAGATTAAAAAAAAGCTTCAAAAAGCTTTAAAAACATTTTTGGAACCTGAATTTGTTGAAATTTTTGAAAAA
GAAATTACAAGCTACAATAACTATCCCCATTAA

Upstream 100 bases:

>100_bases
AATATGGAGAGGAACAATACGAAGGAGAAGAATTAACAGATAATGATCCATTAGAGACTCTTCAAGATACTGACATATCT
GCCAAAGAGGAGAAAAAACG

Downstream 100 bases:

>100_bases
GGGAATATAATTAAATTAAATCCTCTTCTATTTCAAAAGAGTACAAATCAGATTAAATGACTATCAGCGATAAAATCAGA
ATTTACGAACTTTCCAGAGA

Product: nucleic-acid-binding protein implicated in transcription termination

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MIQQNPVLRMCISCRKTYDRKDLLKITKDHKQGIILQKGMGRSAYICKSKKCYSDSKIKKKLQKALKTFLEPEFVEIFEK
EITSYNNYPH

Sequences:

>Translated_90_residues
MIQQNPVLRMCISCRKTYDRKDLLKITKDHKQGIILQKGMGRSAYICKSKKCYSDSKIKKKLQKALKTFLEPEFVEIFEK
EITSYNNYPH
>Mature_90_residues
MIQQNPVLRMCISCRKTYDRKDLLKITKDHKQGIILQKGMGRSAYICKSKKCYSDSKIKKKLQKALKTFLEPEFVEIFEK
EITSYNNYPH

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10661; Mature: 10661

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQQNPVLRMCISCRKTYDRKDLLKITKDHKQGIILQKGMGRSAYICKSKKCYSDSKIKK
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCCCCEEHCCCCCCCCHHHHHH
KLQKALKTFLEPEFVEIFEKEITSYNNYPH
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIQQNPVLRMCISCRKTYDRKDLLKITKDHKQGIILQKGMGRSAYICKSKKCYSDSKIKK
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCCCCEEHCCCCCCCCHHHHHH
KLQKALKTFLEPEFVEIFEKEITSYNNYPH
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA