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The map label for this gene is atpH

Identifier: 126696980

GI number: 126696980

Start: 1374559

End: 1375101

Strand: Reverse

Name: atpH

Synonym: P9301_16421

Alternate gene names: 126696980

Gene position: 1375101-1374559 (Counterclockwise)

Preceding gene: 126696981

Following gene: 126696979

Centisome position: 83.75

GC content: 33.52

Gene sequence:

>543_bases
ATGCCACTTTTAAATTCAGTTACTACACCATACGCAGAGGCATTACTTCAAGTTGTGAATGAAAATTCGCAAACTGAAGA
GATGGTTTCTGAAGTTAAACAACTCCTGGAATTAATAAATAATTCCCCTGAATTGGAGAAGGCACTATCCTCTCCGATTT
TAGAGACAGATGCTAAGAAGAAAATTATTAATGAAATTTTTTCAAAAAAGGTAAATTCTTCTTTACTGAATTTCTTAAAA
TTATTGGCCGATAGGCAAAGAATTGGAATTCTTACTTCAATTCTTGATAGGTTTTTAGAGATTTACCGAGAAAATAGTAA
TATTGCTTTGGCAACTGTTACTTCTGCAGTCGAGCTTACTGATGAACAGAAAGGTTTAATTACCAAAAAGATCATCAATA
TTGCTGGAACAGAAAAATTAGAACTTGTAACTAAAATCGACCCATCTCTTATTGGTGGTTTCGTCGCCAGTGTAGGATCA
AAAGTAATTGATGCTTCTCTTGCTTCACAAATAAGAAAACTTGGCTTATCCCTTTCCAAGTAA

Upstream 100 bases:

>100_bases
TGGCAATTAAGAAAGCTTTAGATTCTCTCCCAAATCGACTTGATAAAACAACACAAGAAAATTTGGTAACTCAATCAATT
AACAATATTGAGGTGAACTA

Downstream 100 bases:

>100_bases
CTTTTAAATCAACCTTAAATTCTTAAATCCATGGTATCTATACGCCCTGATGAAATCAGTTCAATCTTAAAACAACAAAT
AACTGATTATGACCAATCTG

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPLLNSVTTPYAEALLQVVNENSQTEEMVSEVKQLLELINNSPELEKALSSPILETDAKKKIINEIFSKKVNSSLLNFLK
LLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELTDEQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGS
KVIDASLASQIRKLGLSLSK

Sequences:

>Translated_180_residues
MPLLNSVTTPYAEALLQVVNENSQTEEMVSEVKQLLELINNSPELEKALSSPILETDAKKKIINEIFSKKVNSSLLNFLK
LLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELTDEQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGS
KVIDASLASQIRKLGLSLSK
>Mature_179_residues
PLLNSVTTPYAEALLQVVNENSQTEEMVSEVKQLLELINNSPELEKALSSPILETDAKKKIINEIFSKKVNSSLLNFLKL
LADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELTDEQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGSK
VIDASLASQIRKLGLSLSK

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Caenorhabditis elegans, GI71984710, Length=172, Percent_Identity=26.1627906976744, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71984717, Length=172, Percent_Identity=26.1627906976744, Blast_Score=70, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6320504, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24647054, Length=164, Percent_Identity=25.609756097561, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_PROM0 (A3PEU0)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001091866.1
- ProteinModelPortal:   A3PEU0
- STRING:   A3PEU0
- GeneID:   4911139
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_16421
- eggNOG:   COG0712
- HOGENOM:   HBG668108
- OMA:   NANKDFV
- ProtClustDB:   PRK13429
- BioCyc:   PMAR167546:P9301ORF_1674-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19707; Mature: 19576

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLNSVTTPYAEALLQVVNENSQTEEMVSEVKQLLELINNSPELEKALSSPILETDAKK
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH
KIINEIFSKKVNSSLLNFLKLLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
DEQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGSKVIDASLASQIRKLGLSLSK
HHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PLLNSVTTPYAEALLQVVNENSQTEEMVSEVKQLLELINNSPELEKALSSPILETDAKK
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH
KIINEIFSKKVNSSLLNFLKLLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
DEQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGSKVIDASLASQIRKLGLSLSK
HHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA