Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is 126696949

Identifier: 126696949

GI number: 126696949

Start: 1348858

End: 1349370

Strand: Direct

Name: 126696949

Synonym: P9301_16111

Alternate gene names: NA

Gene position: 1348858-1349370 (Clockwise)

Preceding gene: 126696948

Following gene: 126696955

Centisome position: 82.15

GC content: 33.92

Gene sequence:

>513_bases
TTGAAAAAGTTCCTCATTCCTTTACTAGCATTTCTTTCATTACCTATACCAATTAATGCTGAAAAGCTTTGTACATTAAC
TAGCGAGTTAGATAAGGATGTTGTTATCAAAATGGATGGTGAGTATTTAGGAATGTTTGGTCGCATTACCTATAAAAATA
ATCCAATGTATCGTATAAGTTTCTTTCATCAGAATGGGTATGGTGGACATAGATATACCATTAGTGAAGATAAAGATCCC
AATATTTCATGGGAGGATTTTAAACACCAAAAATATCCTGGGAATGGATTGGCAGTCTTTTTTGTTGGAAATCAAGTAGC
TAAAGGTACCCCTGTTGAAAAACGTAAAAAGGGGCAGAAAAGAATGCTTATGCCAAAACTTGGACAAAATATTTGGTACA
TAAGAAATGAATGGGAAAGAAGAACGGAACCTGACAATTTAAAGGTAATAAGTGCCGCGGAAGGCTTCTTTAAAATTGAA
GGAAAGAAATGTAAATTCCCTTATATGTGGTAA

Upstream 100 bases:

>100_bases
GGAAAATGAATTATACCTTTACTAATTATGCTTGCACAGCAGAACAACAATAAAAAACAAATGAAGCAAATAAGACTTGT
AACTATCGAGGATATTTAGA

Downstream 100 bases:

>100_bases
TAAAAAAGAGAGCTTTTTAAGCTCTCTTAAATACGAAATGTTTAGGTTCGTGACTTACTAACGAAGGAAGCGTTTATTTC
TTCCAGATAGATCATTACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKKFLIPLLAFLSLPIPINAEKLCTLTSELDKDVVIKMDGEYLGMFGRITYKNNPMYRISFFHQNGYGGHRYTISEDKDP
NISWEDFKHQKYPGNGLAVFFVGNQVAKGTPVEKRKKGQKRMLMPKLGQNIWYIRNEWERRTEPDNLKVISAAEGFFKIE
GKKCKFPYMW

Sequences:

>Translated_170_residues
MKKFLIPLLAFLSLPIPINAEKLCTLTSELDKDVVIKMDGEYLGMFGRITYKNNPMYRISFFHQNGYGGHRYTISEDKDP
NISWEDFKHQKYPGNGLAVFFVGNQVAKGTPVEKRKKGQKRMLMPKLGQNIWYIRNEWERRTEPDNLKVISAAEGFFKIE
GKKCKFPYMW
>Mature_170_residues
MKKFLIPLLAFLSLPIPINAEKLCTLTSELDKDVVIKMDGEYLGMFGRITYKNNPMYRISFFHQNGYGGHRYTISEDKDP
NISWEDFKHQKYPGNGLAVFFVGNQVAKGTPVEKRKKGQKRMLMPKLGQNIWYIRNEWERRTEPDNLKVISAAEGFFKIE
GKKCKFPYMW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19892; Mature: 19892

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLIPLLAFLSLPIPINAEKLCTLTSELDKDVVIKMDGEYLGMFGRITYKNNPMYRIS
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEEEEEECCCCEEEEE
FFHQNGYGGHRYTISEDKDPNISWEDFKHQKYPGNGLAVFFVGNQVAKGTPVEKRKKGQK
EEEECCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCC
RMLMPKLGQNIWYIRNEWERRTEPDNLKVISAAEGFFKIEGKKCKFPYMW
EECCHHCCCEEEEEECCHHCCCCCCCEEEEEECCCEEEECCCEECCCCCC
>Mature Secondary Structure
MKKFLIPLLAFLSLPIPINAEKLCTLTSELDKDVVIKMDGEYLGMFGRITYKNNPMYRIS
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEEEEEECCCCEEEEE
FFHQNGYGGHRYTISEDKDPNISWEDFKHQKYPGNGLAVFFVGNQVAKGTPVEKRKKGQK
EEEECCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCC
RMLMPKLGQNIWYIRNEWERRTEPDNLKVISAAEGFFKIEGKKCKFPYMW
EECCHHCCCEEEEEECCHHCCCCCCCEEEEEECCCEEEECCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA