| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696921
Identifier: 126696921
GI number: 126696921
Start: 1333449
End: 1334654
Strand: Direct
Name: 126696921
Synonym: P9301_15831
Alternate gene names: NA
Gene position: 1333449-1334654 (Clockwise)
Preceding gene: 126696919
Following gene: 126696924
Centisome position: 81.21
GC content: 30.51
Gene sequence:
>1206_bases TTGAAACTTTCAAATCAATCACTAATAAAAAAAACTATTAATAAAATCATTTCTCCTTGGTATTTACTTCCTTTAATTGA TAGATGGTTATTAGGGCAAATAATTCCTCCCATGATATTTGCAATTTCTGCTTTCACTGTCATTTCATTATCTGTTGGCG TGATGTTTGATCTTATAAGAAAAATAGTTGAATTTGGCTTACCTTTATTTCTGGCTTTAAAAGTCCTTTTTTTTAGTTTA CCCAGTTTTTTAGTTTTATCATTCCCAATGGCAGTTTTGCTTTCAACATTATTAGCCTACGGAAAATTATCAAGCAATTC AGAATTGTTGGCTTTGAAATCTTTGGGTATAAAAACTTCAAGAATCATTTCTCCAGCTATTGCTCTTTCAATATTTATGA CAGGATTGACTTTTTACTTTAACGATAATTTAGTTCCTGCGAGTAATAAATTAGCTGAAAAGACATTAAGAGCAGGAATA GGAAGTTCTTTTAGTGCTGAACAACGAAAAGATAATATTATGTTTTCAAGATATGGATCTAGGATAAGTTCATCAAATAA AAAACCTACAAAAACAAATACTTTTCTTACTCATATATTTTATGCTTCATGGTATGAAAACAACATTATGGAGGGTGTTA CAGTTTTAGATTTTTCTAGAGAAGATTTTCAACAAATCTTAAAGGCAAAGAATGGAGTATTTGACAAAAAAAGTTCTTCT TGGATATTTTCTGACGGGAATATTGTATCAATTGATCCAAGCGGGCAAACTACAAATATTCAATTCCAAGAATATACTTA TCCATTTGTTGAAGGTCCTATGGAGCTAGCAAAGGTGCCTAAAGATGCAAATGAAATGACTTTAAAGCAGGCTATACAAG CAGAAAAGATTTATGAAAAAACTGGAAACTTAAAGGAGATAAGAAGAATTAAAGTCCGCATTCAAGAAAAATTCACTCTA CCTTTTGCATGCTTGGTCTTTGGATTAATAGGAAGCAGTCTAGGGTCTAAATCTAATTTAAGATCTTCAAAAAGTCAGGG ATTTGGGTTGAGTGTAATTCTTATATTAATTTATTATGTAATGTCATTTTTATTTAGTTCCTTCGGAGTAAAGGGTATTT TACCTCCAATTTTTGCTGCATGGTTACCTGTCTTAATTTCTCTTGGAGGTGGAATTTATTTATTAAGAAGATCAAGTTCT TTTTGA
Upstream 100 bases:
>100_bases TAATAAAAAGGTTTTTCTTAACTATCATTTTTATATTGGTTTCTAAATCCTCAATATTTTATAATGTTAAAAAAGACAGT AAAAAACAAATAAATTTCTT
Downstream 100 bases:
>100_bases TATTTAAATCACATAAATTAAGAATGCAATACAAATTATTTTGCAAAAAATAATTTCTTAAATTTTTATTTCTCGTCTAT TTTTTTATAACCATACCAAT
Product: putative permease
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; Unclassified ABC-Type Transport System Permease; Permease Family Protein; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Permease; YjgP/YjgQ Family Membrane Protein
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKLSNQSLIKKTINKIISPWYLLPLIDRWLLGQIIPPMIFAISAFTVISLSVGVMFDLIRKIVEFGLPLFLALKVLFFSL PSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNLVPASNKLAEKTLRAGI GSSFSAEQRKDNIMFSRYGSRISSSNKKPTKTNTFLTHIFYASWYENNIMEGVTVLDFSREDFQQILKAKNGVFDKKSSS WIFSDGNIVSIDPSGQTTNIQFQEYTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYEKTGNLKEIRRIKVRIQEKFTL PFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFLFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRRSSS F
Sequences:
>Translated_401_residues MKLSNQSLIKKTINKIISPWYLLPLIDRWLLGQIIPPMIFAISAFTVISLSVGVMFDLIRKIVEFGLPLFLALKVLFFSL PSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNLVPASNKLAEKTLRAGI GSSFSAEQRKDNIMFSRYGSRISSSNKKPTKTNTFLTHIFYASWYENNIMEGVTVLDFSREDFQQILKAKNGVFDKKSSS WIFSDGNIVSIDPSGQTTNIQFQEYTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYEKTGNLKEIRRIKVRIQEKFTL PFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFLFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRRSSS F >Mature_401_residues MKLSNQSLIKKTINKIISPWYLLPLIDRWLLGQIIPPMIFAISAFTVISLSVGVMFDLIRKIVEFGLPLFLALKVLFFSL PSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTSRIISPAIALSIFMTGLTFYFNDNLVPASNKLAEKTLRAGI GSSFSAEQRKDNIMFSRYGSRISSSNKKPTKTNTFLTHIFYASWYENNIMEGVTVLDFSREDFQQILKAKNGVFDKKSSS WIFSDGNIVSIDPSGQTTNIQFQEYTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYEKTGNLKEIRRIKVRIQEKFTL PFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYVMSFLFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRRSSS F
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44766; Mature: 44766
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSNQSLIKKTINKIISPWYLLPLIDRWLLGQIIPPMIFAISAFTVISLSVGVMFDLIR CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIVEFGLPLFLALKVLFFSLPSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCCHH RIISPAIALSIFMTGLTFYFNDNLVPASNKLAEKTLRAGIGSSFSAEQRKDNIMFSRYGS HHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHCC RISSSNKKPTKTNTFLTHIFYASWYENNIMEGVTVLDFSREDFQQILKAKNGVFDKKSSS HHHCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCEEECCHHHHHHHHHHHCCCCCCCCCC WIFSDGNIVSIDPSGQTTNIQFQEYTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYEK EEEECCCEEEECCCCCEEEEEECCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHH TGNLKEIRRIKVRIQEKFTLPFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYV CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHH MSFLFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRRSSSF HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC >Mature Secondary Structure MKLSNQSLIKKTINKIISPWYLLPLIDRWLLGQIIPPMIFAISAFTVISLSVGVMFDLIR CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIVEFGLPLFLALKVLFFSLPSFLVLSFPMAVLLSTLLAYGKLSSNSELLALKSLGIKTS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCCHH RIISPAIALSIFMTGLTFYFNDNLVPASNKLAEKTLRAGIGSSFSAEQRKDNIMFSRYGS HHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHCC RISSSNKKPTKTNTFLTHIFYASWYENNIMEGVTVLDFSREDFQQILKAKNGVFDKKSSS HHHCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCEEECCHHHHHHHHHHHCCCCCCCCCC WIFSDGNIVSIDPSGQTTNIQFQEYTYPFVEGPMELAKVPKDANEMTLKQAIQAEKIYEK EEEECCCEEEECCCCCEEEEEECCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHH TGNLKEIRRIKVRIQEKFTLPFACLVFGLIGSSLGSKSNLRSSKSQGFGLSVILILIYYV CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHH MSFLFSSFGVKGILPPIFAAWLPVLISLGGGIYLLRRSSSF HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA