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The map label for this gene is 126696914

Identifier: 126696914

GI number: 126696914

Start: 1328773

End: 1329939

Strand: Direct

Name: 126696914

Synonym: P9301_15761

Alternate gene names: NA

Gene position: 1328773-1329939 (Clockwise)

Preceding gene: 126696912

Following gene: 126696915

Centisome position: 80.93

GC content: 34.36

Gene sequence:

>1167_bases
TTGAGTAATATAAATTTTTCAGGTCTTAAAGGCCAAGCGCTTGTAATAGAGGATAAAGATATTCCAAGCATGAAAGAGTT
TCAGGATGTTATCCCAGATCACTACTTTAAGTGCAATACCAAAACTTCATTGAGGTATCTTTTACAATCAGCTTTAATTC
AATCATTAGTAGTTGCGATAGGGTTATCTATTCCATTTACCCCCAAAATGATCCCAATTTGGATTATTTACGCATTACTA
TCAGGTACCACTGCAATGGGATTTTGGGTAATTTCCCATGAATGTGGACATGGAGCATTCTCTAAAAACAAGACATTGGA
ATCCATAACTGGTTATTTACTTCATTCATTACTTCTGGTGCCTTATTTTTCTTGGCAGCGTTCTCATGCTGTTCATCATC
GATTTACAAATAATATAACCAATGGAGAAACTCACGTCCCTTTGGTCATTAAAGGGAATGGAGTTACAGAAAAAGTTGGA
GGAGAAAAAGAATTACATTTTTCAAATTCCTTAGGTAAGAAAAATTATGGAATTCTTCAACTTGTTTTACATCTAATATT
TGGCTGGCCTGCTTATTTACTTACTGGGAGTACAGGAGGTATTAAGTATGGAACATCAAATCATTTTTGGCCAATTAAAC
CATTTTCCAAGGCATTATGGCCATCAATATGGGCCAGGAAAGTTTGGATATCAGATATTGGTGTAGGTTTAACATTATTG
GGCATTGTTTATTTAGTTTTCAAGTATGGATTATTTCCAGTAATTGCTCTGTATTTTGGTCCTTTATTAGTGGTTAATTG
TTGGCTAGTAGTTTATACATGGCTTCATCACACAGATTCAGATGTGCCTCATATTTCAAATACCGAATTTTCCTTTATGA
AAGGCGCATTTCTATCTATTGATAGGCCTTACGGTAGAATCCTTAATTTTCTTCACCATAATATAGGTTCTAGCCATGTC
GTTCATCATGTATGTCCAACGATACCTCATTATCATGCAAAAAAGGCAACTATCTTAATTAAAAAAGCCTTTAAAAAAGC
ATATCTTTTTAATCCTGATCCAATACACAAAGCTCTATGGAATATTGCTTGCAATTGCGTTGCTGTTAAGTCAGACATCA
AGAGAAGAAGATATGTATGGCAATCTTCATACAAAATGGTGGATTAA

Upstream 100 bases:

>100_bases
TCGAAAAAAAATTATAAATTATTTTCATTATGCGATCCTTTGATGGATAATAGAATATATAAATTCACATTTATTTAACA
AAATTCTTAACTAAAAAAAT

Downstream 100 bases:

>100_bases
AAACAGAATAATCATCAATTTTTTATCACATTAATTTGCGCAAATCTGAAAAGAATATAAAAGAATTAGCAATAACAAAT
TTTTCATCTTAGAAATATTT

Product: fatty acid desaturase, type 2

Products: NA

Alternate protein names: Delta(12)-Fatty Acid Dehydrogenase; Omega-3 Fatty Acid Desaturase; Fatty Acid Desaturase Domain Protein; Omega-3 Acyl-Lipid Desaturase; Omega 3 Acyl-Lipid Desaturase; Phosphatidylcholine Desaturase

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSNINFSGLKGQALVIEDKDIPSMKEFQDVIPDHYFKCNTKTSLRYLLQSALIQSLVVAIGLSIPFTPKMIPIWIIYALL
SGTTAMGFWVISHECGHGAFSKNKTLESITGYLLHSLLLVPYFSWQRSHAVHHRFTNNITNGETHVPLVIKGNGVTEKVG
GEKELHFSNSLGKKNYGILQLVLHLIFGWPAYLLTGSTGGIKYGTSNHFWPIKPFSKALWPSIWARKVWISDIGVGLTLL
GIVYLVFKYGLFPVIALYFGPLLVVNCWLVVYTWLHHTDSDVPHISNTEFSFMKGAFLSIDRPYGRILNFLHHNIGSSHV
VHHVCPTIPHYHAKKATILIKKAFKKAYLFNPDPIHKALWNIACNCVAVKSDIKRRRYVWQSSYKMVD

Sequences:

>Translated_388_residues
MSNINFSGLKGQALVIEDKDIPSMKEFQDVIPDHYFKCNTKTSLRYLLQSALIQSLVVAIGLSIPFTPKMIPIWIIYALL
SGTTAMGFWVISHECGHGAFSKNKTLESITGYLLHSLLLVPYFSWQRSHAVHHRFTNNITNGETHVPLVIKGNGVTEKVG
GEKELHFSNSLGKKNYGILQLVLHLIFGWPAYLLTGSTGGIKYGTSNHFWPIKPFSKALWPSIWARKVWISDIGVGLTLL
GIVYLVFKYGLFPVIALYFGPLLVVNCWLVVYTWLHHTDSDVPHISNTEFSFMKGAFLSIDRPYGRILNFLHHNIGSSHV
VHHVCPTIPHYHAKKATILIKKAFKKAYLFNPDPIHKALWNIACNCVAVKSDIKRRRYVWQSSYKMVD
>Mature_387_residues
SNINFSGLKGQALVIEDKDIPSMKEFQDVIPDHYFKCNTKTSLRYLLQSALIQSLVVAIGLSIPFTPKMIPIWIIYALLS
GTTAMGFWVISHECGHGAFSKNKTLESITGYLLHSLLLVPYFSWQRSHAVHHRFTNNITNGETHVPLVIKGNGVTEKVGG
EKELHFSNSLGKKNYGILQLVLHLIFGWPAYLLTGSTGGIKYGTSNHFWPIKPFSKALWPSIWARKVWISDIGVGLTLLG
IVYLVFKYGLFPVIALYFGPLLVVNCWLVVYTWLHHTDSDVPHISNTEFSFMKGAFLSIDRPYGRILNFLHHNIGSSHVV
HHVCPTIPHYHAKKATILIKKAFKKAYLFNPDPIHKALWNIACNCVAVKSDIKRRRYVWQSSYKMVD

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17542730, Length=341, Percent_Identity=29.0322580645161, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI71999459, Length=339, Percent_Identity=28.3185840707965, Blast_Score=120, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.14.99.-

Molecular weight: Translated: 43945; Mature: 43814

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNINFSGLKGQALVIEDKDIPSMKEFQDVIPDHYFKCNTKTSLRYLLQSALIQSLVVAI
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
GLSIPFTPKMIPIWIIYALLSGTTAMGFWVISHECGHGAFSKNKTLESITGYLLHSLLLV
CCCCCCCCCHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
PYFSWQRSHAVHHRFTNNITNGETHVPLVIKGNGVTEKVGGEKELHFSNSLGKKNYGILQ
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCHHHH
LVLHLIFGWPAYLLTGSTGGIKYGTSNHFWPIKPFSKALWPSIWARKVWISDIGVGLTLL
HHHHHHHCCHHHEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIVYLVFKYGLFPVIALYFGPLLVVNCWLVVYTWLHHTDSDVPHISNTEFSFMKGAFLSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHCC
DRPYGRILNFLHHNIGSSHVVHHVCPTIPHYHAKKATILIKKAFKKAYLFNPDPIHKALW
CCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
NIACNCVAVKSDIKRRRYVWQSSYKMVD
HHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SNINFSGLKGQALVIEDKDIPSMKEFQDVIPDHYFKCNTKTSLRYLLQSALIQSLVVAI
CCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
GLSIPFTPKMIPIWIIYALLSGTTAMGFWVISHECGHGAFSKNKTLESITGYLLHSLLLV
CCCCCCCCCHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
PYFSWQRSHAVHHRFTNNITNGETHVPLVIKGNGVTEKVGGEKELHFSNSLGKKNYGILQ
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCHHHH
LVLHLIFGWPAYLLTGSTGGIKYGTSNHFWPIKPFSKALWPSIWARKVWISDIGVGLTLL
HHHHHHHCCHHHEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIVYLVFKYGLFPVIALYFGPLLVVNCWLVVYTWLHHTDSDVPHISNTEFSFMKGAFLSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHCC
DRPYGRILNFLHHNIGSSHVVHHVCPTIPHYHAKKATILIKKAFKKAYLFNPDPIHKALW
CCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
NIACNCVAVKSDIKRRRYVWQSSYKMVD
HHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA