| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696893
Identifier: 126696893
GI number: 126696893
Start: 1317530
End: 1318066
Strand: Reverse
Name: 126696893
Synonym: P9301_15551
Alternate gene names: NA
Gene position: 1318066-1317530 (Counterclockwise)
Preceding gene: 126696894
Following gene: 126696892
Centisome position: 80.28
GC content: 25.7
Gene sequence:
>537_bases TTGAATAATTTATTTCTAGAAAGAAATTGTTTAAGAAGTGCTAACAAACTATATAGATGGAGTTTAAGTTACAAGATTGC TAAATCTAAAAAAGAGATTATCTTTATTGGTTTAAATCCCTCATTATCGGATGAAGTTTTCTTGGACAACACAACAAGAA AGATAATCAAAATTTCGAAAAACAATAATTACGGCAAAGTTAAATTAATAAATTTATTTGCCCTTATTTCAAGCAAACCA GAAAAACTTTTTAAACATAAAAACCCAGTGGGTTATCTAAACAATAATCATATTTATAAAAACTTAAAACACTGGTCTGA AAGTGAAAATTGTGATTTATGGTTAGGTTGGGGTAACAAAGGTAAATTTCTAAATAGAAATAAAAGAATATCAAAAAAAA TAATGCAATATAACTCAATTAGGAAAAATAATTTTGATAATCCTCTTGGACCGCTTTTAATTAAGAAAACAATCAAAGAT AATCCAATACACCCACTATATTGTTCTGATAATTCAATCCTCCAATCTTATTTTTAG
Upstream 100 bases:
>100_bases ATCTAGTTAAGAGGTTCAGGCTAATTATTACTACTGAATTAGTGGGCTTTGCAACAATACCTTTGTTTGCAACACTCATG GCTAGAGGTGTAGGTTTAGG
Downstream 100 bases:
>100_bases GTAGTAAAGCTCAAATGCAAACCAGTATTTTTAGCTATTCCATTAAATATGTGTTAATTTCTATTTGTTAAGTTAACCTA ATATGAAAATTTCAAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MNNLFLERNCLRSANKLYRWSLSYKIAKSKKEIIFIGLNPSLSDEVFLDNTTRKIIKISKNNNYGKVKLINLFALISSKP EKLFKHKNPVGYLNNNHIYKNLKHWSESENCDLWLGWGNKGKFLNRNKRISKKIMQYNSIRKNNFDNPLGPLLIKKTIKD NPIHPLYCSDNSILQSYF
Sequences:
>Translated_178_residues MNNLFLERNCLRSANKLYRWSLSYKIAKSKKEIIFIGLNPSLSDEVFLDNTTRKIIKISKNNNYGKVKLINLFALISSKP EKLFKHKNPVGYLNNNHIYKNLKHWSESENCDLWLGWGNKGKFLNRNKRISKKIMQYNSIRKNNFDNPLGPLLIKKTIKD NPIHPLYCSDNSILQSYF >Mature_178_residues MNNLFLERNCLRSANKLYRWSLSYKIAKSKKEIIFIGLNPSLSDEVFLDNTTRKIIKISKNNNYGKVKLINLFALISSKP EKLFKHKNPVGYLNNNHIYKNLKHWSESENCDLWLGWGNKGKFLNRNKRISKKIMQYNSIRKNNFDNPLGPLLIKKTIKD NPIHPLYCSDNSILQSYF
Specific function: Unknown
COG id: COG4333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20938; Mature: 20938
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLFLERNCLRSANKLYRWSLSYKIAKSKKEIIFIGLNPSLSDEVFLDNTTRKIIKISK CCCCCCCHHHHHHHHHEEEEEEEEEEECCCCCEEEEECCCCCCCCEEECCCCEEEEEEEC NNNYGKVKLINLFALISSKPEKLFKHKNPVGYLNNNHIYKNLKHWSESENCDLWLGWGNK CCCCCEEEHEEEEHHHCCCHHHHHHCCCCCCEECCCHHHHHHHHCCCCCCCEEEEEECCC GKFLNRNKRISKKIMQYNSIRKNNFDNPLGPLLIKKTIKDNPIHPLYCSDNSILQSYF CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCHHHHHCC >Mature Secondary Structure MNNLFLERNCLRSANKLYRWSLSYKIAKSKKEIIFIGLNPSLSDEVFLDNTTRKIIKISK CCCCCCCHHHHHHHHHEEEEEEEEEEECCCCCEEEEECCCCCCCCEEECCCCEEEEEEEC NNNYGKVKLINLFALISSKPEKLFKHKNPVGYLNNNHIYKNLKHWSESENCDLWLGWGNK CCCCCEEEHEEEEHHHCCCHHHHHHCCCCCCEECCCHHHHHHHHCCCCCCCEEEEEECCC GKFLNRNKRISKKIMQYNSIRKNNFDNPLGPLLIKKTIKDNPIHPLYCSDNSILQSYF CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA