Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is yhhW [C]

Identifier: 126696891

GI number: 126696891

Start: 1316500

End: 1317231

Strand: Reverse

Name: yhhW [C]

Synonym: P9301_15531

Alternate gene names: 126696891

Gene position: 1317231-1316500 (Counterclockwise)

Preceding gene: 126696892

Following gene: 126696888

Centisome position: 80.23

GC content: 28.42

Gene sequence:

>732_bases
ATGTCTTTTAAAATAATTAAAATAAGGAAATCGCACGAACGATTTAGATCGACTAGAGAATGGCTAAATTCGATGCATTC
ATTTTCTTTCGCAGAACATAGAGATCCAAAATGGGATAATTTTGGGAAAATTAGAGTTATAAACGAAGATATTATTTCTC
CTAATTCAGGATTTGATACACATTCTCATGCAAATATGGAAATAATTACTGTCGTAACAAAAGGAGCAATAACTCATAGA
GACTCTTTAAACAATCTTGGAAAAATTCAAAAAGATGAAGTACAAGTTATGTCTGCAGGTACTGGAATTTCTCATAGCGA
GAAGAATGAAGAAAATGAGAACTGTAAGTTGTTCCAGATTTGGATATACCCTCAAAAAGAAAATATCAAACCTCGATATG
ATCAAATTTCATTAAATGAAAATTTGTGGGACAATCTTATTTTTAATTACAAAGACGGAAAAAATAATAAGCTTTTTCTA
AATCAAAGTATCTCTTTATGGCGTTGTAAATATAAGCCAATTAAAGAAAAAAAATTGCCATTAAAAATCGATAAATATAA
TTGGATACAAATAATAGAAGGTAATCTTTTGTTAAAAAGTAAAGAATCTAATTCAAATATATTTCTCGAATCTGGAGATG
GCTTGGGTTTTGAAGTTAATTATTATGATGATGTCTCTATAGATACTCAAAAAAACTTAGATTTTCTCTTATTTTCGATG
CCTTCCTTATGA

Upstream 100 bases:

>100_bases
AATCAACAAATAAATAAAAAGTAATTTCACTTTTTAATAATTTATAATTTTCAAAAATAGTTAATTTACACAAAAACACC
ATATTTATTTCTTACTATTT

Downstream 100 bases:

>100_bases
TTTATCTTTTACTTTTACCCATCAACTCCTTTATTAAATGCATTTAAGGCTTGCAAAGCCATATTAAGGTGAACTTCCAT
AGCACCAAGTGCAATTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein PM1685 [H]

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSFKIIKIRKSHERFRSTREWLNSMHSFSFAEHRDPKWDNFGKIRVINEDIISPNSGFDTHSHANMEIITVVTKGAITHR
DSLNNLGKIQKDEVQVMSAGTGISHSEKNEENENCKLFQIWIYPQKENIKPRYDQISLNENLWDNLIFNYKDGKNNKLFL
NQSISLWRCKYKPIKEKKLPLKIDKYNWIQIIEGNLLLKSKESNSNIFLESGDGLGFEVNYYDDVSIDTQKNLDFLLFSM
PSL

Sequences:

>Translated_243_residues
MSFKIIKIRKSHERFRSTREWLNSMHSFSFAEHRDPKWDNFGKIRVINEDIISPNSGFDTHSHANMEIITVVTKGAITHR
DSLNNLGKIQKDEVQVMSAGTGISHSEKNEENENCKLFQIWIYPQKENIKPRYDQISLNENLWDNLIFNYKDGKNNKLFL
NQSISLWRCKYKPIKEKKLPLKIDKYNWIQIIEGNLLLKSKESNSNIFLESGDGLGFEVNYYDDVSIDTQKNLDFLLFSM
PSL
>Mature_242_residues
SFKIIKIRKSHERFRSTREWLNSMHSFSFAEHRDPKWDNFGKIRVINEDIISPNSGFDTHSHANMEIITVVTKGAITHRD
SLNNLGKIQKDEVQVMSAGTGISHSEKNEENENCKLFQIWIYPQKENIKPRYDQISLNENLWDNLIFNYKDGKNNKLFLN
QSISLWRCKYKPIKEKKLPLKIDKYNWIQIIEGNLLLKSKESNSNIFLESGDGLGFEVNYYDDVSIDTQKNLDFLLFSMP
SL

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Escherichia coli, GI1789847, Length=242, Percent_Identity=34.297520661157, Blast_Score=157, Evalue=6e-40,
Organism=Escherichia coli, GI1789493, Length=163, Percent_Identity=25.7668711656442, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 28510; Mature: 28379

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKIIKIRKSHERFRSTREWLNSMHSFSFAEHRDPKWDNFGKIRVINEDIISPNSGFDT
CCEEEEEEEHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCC
HSHANMEIITVVTKGAITHRDSLNNLGKIQKDEVQVMSAGTGISHSEKNEENENCKLFQI
CCCCCEEEEEEEECCCEECCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEE
WIYPQKENIKPRYDQISLNENLWDNLIFNYKDGKNNKLFLNQSISLWRCKYKPIKEKKLP
EEEECCCCCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCC
LKIDKYNWIQIIEGNLLLKSKESNSNIFLESGDGLGFEVNYYDDVSIDTQKNLDFLLFSM
EEECCCCEEEEEECCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEC
PSL
CCC
>Mature Secondary Structure 
SFKIIKIRKSHERFRSTREWLNSMHSFSFAEHRDPKWDNFGKIRVINEDIISPNSGFDT
CEEEEEEEHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCC
HSHANMEIITVVTKGAITHRDSLNNLGKIQKDEVQVMSAGTGISHSEKNEENENCKLFQI
CCCCCEEEEEEEECCCEECCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEE
WIYPQKENIKPRYDQISLNENLWDNLIFNYKDGKNNKLFLNQSISLWRCKYKPIKEKKLP
EEEECCCCCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCC
LKIDKYNWIQIIEGNLLLKSKESNSNIFLESGDGLGFEVNYYDDVSIDTQKNLDFLLFSM
EEECCCCEEEEEECCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEC
PSL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]