| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is yhhW [C]
Identifier: 126696891
GI number: 126696891
Start: 1316500
End: 1317231
Strand: Reverse
Name: yhhW [C]
Synonym: P9301_15531
Alternate gene names: 126696891
Gene position: 1317231-1316500 (Counterclockwise)
Preceding gene: 126696892
Following gene: 126696888
Centisome position: 80.23
GC content: 28.42
Gene sequence:
>732_bases ATGTCTTTTAAAATAATTAAAATAAGGAAATCGCACGAACGATTTAGATCGACTAGAGAATGGCTAAATTCGATGCATTC ATTTTCTTTCGCAGAACATAGAGATCCAAAATGGGATAATTTTGGGAAAATTAGAGTTATAAACGAAGATATTATTTCTC CTAATTCAGGATTTGATACACATTCTCATGCAAATATGGAAATAATTACTGTCGTAACAAAAGGAGCAATAACTCATAGA GACTCTTTAAACAATCTTGGAAAAATTCAAAAAGATGAAGTACAAGTTATGTCTGCAGGTACTGGAATTTCTCATAGCGA GAAGAATGAAGAAAATGAGAACTGTAAGTTGTTCCAGATTTGGATATACCCTCAAAAAGAAAATATCAAACCTCGATATG ATCAAATTTCATTAAATGAAAATTTGTGGGACAATCTTATTTTTAATTACAAAGACGGAAAAAATAATAAGCTTTTTCTA AATCAAAGTATCTCTTTATGGCGTTGTAAATATAAGCCAATTAAAGAAAAAAAATTGCCATTAAAAATCGATAAATATAA TTGGATACAAATAATAGAAGGTAATCTTTTGTTAAAAAGTAAAGAATCTAATTCAAATATATTTCTCGAATCTGGAGATG GCTTGGGTTTTGAAGTTAATTATTATGATGATGTCTCTATAGATACTCAAAAAAACTTAGATTTTCTCTTATTTTCGATG CCTTCCTTATGA
Upstream 100 bases:
>100_bases AATCAACAAATAAATAAAAAGTAATTTCACTTTTTAATAATTTATAATTTTCAAAAATAGTTAATTTACACAAAAACACC ATATTTATTTCTTACTATTT
Downstream 100 bases:
>100_bases TTTATCTTTTACTTTTACCCATCAACTCCTTTATTAAATGCATTTAAGGCTTGCAAAGCCATATTAAGGTGAACTTCCAT AGCACCAAGTGCAATTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PM1685 [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSFKIIKIRKSHERFRSTREWLNSMHSFSFAEHRDPKWDNFGKIRVINEDIISPNSGFDTHSHANMEIITVVTKGAITHR DSLNNLGKIQKDEVQVMSAGTGISHSEKNEENENCKLFQIWIYPQKENIKPRYDQISLNENLWDNLIFNYKDGKNNKLFL NQSISLWRCKYKPIKEKKLPLKIDKYNWIQIIEGNLLLKSKESNSNIFLESGDGLGFEVNYYDDVSIDTQKNLDFLLFSM PSL
Sequences:
>Translated_243_residues MSFKIIKIRKSHERFRSTREWLNSMHSFSFAEHRDPKWDNFGKIRVINEDIISPNSGFDTHSHANMEIITVVTKGAITHR DSLNNLGKIQKDEVQVMSAGTGISHSEKNEENENCKLFQIWIYPQKENIKPRYDQISLNENLWDNLIFNYKDGKNNKLFL NQSISLWRCKYKPIKEKKLPLKIDKYNWIQIIEGNLLLKSKESNSNIFLESGDGLGFEVNYYDDVSIDTQKNLDFLLFSM PSL >Mature_242_residues SFKIIKIRKSHERFRSTREWLNSMHSFSFAEHRDPKWDNFGKIRVINEDIISPNSGFDTHSHANMEIITVVTKGAITHRD SLNNLGKIQKDEVQVMSAGTGISHSEKNEENENCKLFQIWIYPQKENIKPRYDQISLNENLWDNLIFNYKDGKNNKLFLN QSISLWRCKYKPIKEKKLPLKIDKYNWIQIIEGNLLLKSKESNSNIFLESGDGLGFEVNYYDDVSIDTQKNLDFLLFSMP SL
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Escherichia coli, GI1789847, Length=242, Percent_Identity=34.297520661157, Blast_Score=157, Evalue=6e-40, Organism=Escherichia coli, GI1789493, Length=163, Percent_Identity=25.7668711656442, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 28510; Mature: 28379
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKIIKIRKSHERFRSTREWLNSMHSFSFAEHRDPKWDNFGKIRVINEDIISPNSGFDT CCEEEEEEEHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCC HSHANMEIITVVTKGAITHRDSLNNLGKIQKDEVQVMSAGTGISHSEKNEENENCKLFQI CCCCCEEEEEEEECCCEECCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEE WIYPQKENIKPRYDQISLNENLWDNLIFNYKDGKNNKLFLNQSISLWRCKYKPIKEKKLP EEEECCCCCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCC LKIDKYNWIQIIEGNLLLKSKESNSNIFLESGDGLGFEVNYYDDVSIDTQKNLDFLLFSM EEECCCCEEEEEECCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEC PSL CCC >Mature Secondary Structure SFKIIKIRKSHERFRSTREWLNSMHSFSFAEHRDPKWDNFGKIRVINEDIISPNSGFDT CEEEEEEEHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCC HSHANMEIITVVTKGAITHRDSLNNLGKIQKDEVQVMSAGTGISHSEKNEENENCKLFQI CCCCCEEEEEEEECCCEECCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEE WIYPQKENIKPRYDQISLNENLWDNLIFNYKDGKNNKLFLNQSISLWRCKYKPIKEKKLP EEEECCCCCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCC LKIDKYNWIQIIEGNLLLKSKESNSNIFLESGDGLGFEVNYYDDVSIDTQKNLDFLLFSM EEECCCCEEEEEECCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEC PSL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]