Click here to switch to the map view.

The map label for this gene is spoIID

Identifier: 126696872

GI number: 126696872

Start: 1301094

End: 1302269

Strand: Reverse

Name: spoIID

Synonym: P9301_15341

Alternate gene names: NA

Gene position: 1302269-1301094 (Counterclockwise)

Preceding gene: 126696875

Following gene: 126696870

Centisome position: 79.32

GC content: 29.17

Gene sequence:

>1176_bases
GTGATACTTAAATTTAAAAATAACTATAGAAAATGTTGCCTGATAAGTATTTTATTTATTTGTATTTTTCAGAGTGAAAG
TGTTTTTGCATCCAGAGAACCAATCATTAGAGTTTTGATATCAAAAAATAACAATTTAAGGATCAGATCAGATAGATCAA
TTCCTTTAACAATAGAGGGTAAATTTTTTTCACGCAAAAGAATAAAAGGTCTAACTTTGAAAAATGAGAAAAATAAAAAA
ATTTTATATTTTGATAGAAATAAACAAAAAAAATATGACTTAAAAAGTAATCAAAAATTTCAAGTAAGTTCTTCCGATGG
AAGAGGTATTTGGGTAGGTCAGAAGAGATTTGCTGGTAAGCTTAATCTCTTTGTACTTGATTCTGAAATATTGGTAGTAA
ATGTTTTAGGAATAGAAAAATACCTTAATAGCGTAGTGGGTTCAGAAATGCCAACAAAATGGCCTATTGAAGCATTAAAG
GCACAAGCAATTGCCTCGAGAACTTATGCTTTAAAGCAAAAGGGAAATAATTTATTTGATATAGATTCAACTCAGAAAAA
TCAAGTCTATAATGGCTTGGAATCAAGAACTTATAAAACTATCAGAGCCGTTAAAAGTACAAGATCTTTGGTTTTAACTT
ATAAAAATAAATTAATTAATGCTTTGTTTCATAGCAGCTCAGGTGGAATGACAGAAAATAGTCAAGATGTATGGAAAAAT
AAATATCCATATTTATCAAGTGTGAAAGATTTTGATAAAAATAATCCAAAATTTAGATGGCAAAAAAAAATTTCGAGTAA
TGAATTAATAAATTTATTTCCAAAGATTGGAGGTTTAAAAAATATAGAGATTCTAGATATTACTAGTACAGGGAGGGTAA
AAAATATAAAACTTATTGGGGCTTATGGTTCTGATCAAATATCTGGGGTAGATTTTAGAAAAAGAGTAGGCCTGAACAGT
AATTTTATCAGATTTAAATTTTTTGAGGAAGAATTAAACAACAATACTCCTCAAAAGAAAGGGTTGATAGTTTTTGGACA
AGGATCAGGTCATGGAGTCGGAATGAGTCAGTGGGGGGCTAAATATCTGGCGTCTAGAGGCCAAAAAGCTGAAAGAATAT
TAAAGCATTTTTATAAGGGTGTGCAGGTTAAACCTTTTAGAAAAGATTACCTATAG

Upstream 100 bases:

>100_bases
GGTGATATTCACTTATTTATGATATTTTTATTGTTATATCTGGATTAAATTTAGACTTTTAGTCAAACTTAGGCAAATTA
AGCATTTGTTTTTAAACAAA

Downstream 100 bases:

>100_bases
AAGTTATTTAGCATTAAGGACTAATTTTGGATTTATATTAGATTGCTCTTCATTTAAGAAACCTATCCCAAGCAGTATTT
GTTTTTTATCTATTACTTTT

Product: sporulation protein SpoIID

Products: NA

Alternate protein names: H-34 [H]

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MILKFKNNYRKCCLISILFICIFQSESVFASREPIIRVLISKNNNLRIRSDRSIPLTIEGKFFSRKRIKGLTLKNEKNKK
ILYFDRNKQKKYDLKSNQKFQVSSSDGRGIWVGQKRFAGKLNLFVLDSEILVVNVLGIEKYLNSVVGSEMPTKWPIEALK
AQAIASRTYALKQKGNNLFDIDSTQKNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
KYPYLSSVKDFDKNNPKFRWQKKISSNELINLFPKIGGLKNIEILDITSTGRVKNIKLIGAYGSDQISGVDFRKRVGLNS
NFIRFKFFEEELNNNTPQKKGLIVFGQGSGHGVGMSQWGAKYLASRGQKAERILKHFYKGVQVKPFRKDYL

Sequences:

>Translated_391_residues
MILKFKNNYRKCCLISILFICIFQSESVFASREPIIRVLISKNNNLRIRSDRSIPLTIEGKFFSRKRIKGLTLKNEKNKK
ILYFDRNKQKKYDLKSNQKFQVSSSDGRGIWVGQKRFAGKLNLFVLDSEILVVNVLGIEKYLNSVVGSEMPTKWPIEALK
AQAIASRTYALKQKGNNLFDIDSTQKNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
KYPYLSSVKDFDKNNPKFRWQKKISSNELINLFPKIGGLKNIEILDITSTGRVKNIKLIGAYGSDQISGVDFRKRVGLNS
NFIRFKFFEEELNNNTPQKKGLIVFGQGSGHGVGMSQWGAKYLASRGQKAERILKHFYKGVQVKPFRKDYL
>Mature_391_residues
MILKFKNNYRKCCLISILFICIFQSESVFASREPIIRVLISKNNNLRIRSDRSIPLTIEGKFFSRKRIKGLTLKNEKNKK
ILYFDRNKQKKYDLKSNQKFQVSSSDGRGIWVGQKRFAGKLNLFVLDSEILVVNVLGIEKYLNSVVGSEMPTKWPIEALK
AQAIASRTYALKQKGNNLFDIDSTQKNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
KYPYLSSVKDFDKNNPKFRWQKKISSNELINLFPKIGGLKNIEILDITSTGRVKNIKLIGAYGSDQISGVDFRKRVGLNS
NFIRFKFFEEELNNNTPQKKGLIVFGQGSGHGVGMSQWGAKYLASRGQKAERILKHFYKGVQVKPFRKDYL

Specific function: Might be involved in sporulation [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 44877; Mature: 44877

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKFKNNYRKCCLISILFICIFQSESVFASREPIIRVLISKNNNLRIRSDRSIPLTIEG
CEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEEC
KFFSRKRIKGLTLKNEKNKKILYFDRNKQKKYDLKSNQKFQVSSSDGRGIWVGQKRFAGK
CEECCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEECHHCCCE
LNLFVLDSEILVVNVLGIEKYLNSVVGSEMPTKWPIEALKAQAIASRTYALKQKGNNLFD
EEEEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
IDSTQKNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHC
KYPYLSSVKDFDKNNPKFRWQKKISSNELINLFPKIGGLKNIEILDITSTGRVKNIKLIG
CCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEE
AYGSDQISGVDFRKRVGLNSNFIRFKFFEEELNNNTPQKKGLIVFGQGSGHGVGMSQWGA
ECCCCCCCCCCHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHH
KYLASRGQKAERILKHFYKGVQVKPFRKDYL
HHHHHCCHHHHHHHHHHHCCCEECCHHHCCC
>Mature Secondary Structure
MILKFKNNYRKCCLISILFICIFQSESVFASREPIIRVLISKNNNLRIRSDRSIPLTIEG
CEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEEC
KFFSRKRIKGLTLKNEKNKKILYFDRNKQKKYDLKSNQKFQVSSSDGRGIWVGQKRFAGK
CEECCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEECHHCCCE
LNLFVLDSEILVVNVLGIEKYLNSVVGSEMPTKWPIEALKAQAIASRTYALKQKGNNLFD
EEEEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
IDSTQKNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHC
KYPYLSSVKDFDKNNPKFRWQKKISSNELINLFPKIGGLKNIEILDITSTGRVKNIKLIG
CCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEE
AYGSDQISGVDFRKRVGLNSNFIRFKFFEEELNNNTPQKKGLIVFGQGSGHGVGMSQWGA
ECCCCCCCCCCHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHH
KYLASRGQKAERILKHFYKGVQVKPFRKDYL
HHHHHCCHHHHHHHHHHHCCCEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA