| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696772
Identifier: 126696772
GI number: 126696772
Start: 1203769
End: 1204377
Strand: Direct
Name: 126696772
Synonym: P9301_14341
Alternate gene names: NA
Gene position: 1203769-1204377 (Clockwise)
Preceding gene: 126696771
Following gene: 126696773
Centisome position: 73.32
GC content: 33.5
Gene sequence:
>609_bases ATGACAGTTTCAAATTTAACAGATGCAATTCCTGGTTTTGAAGATTTTTCAATTAAGTTCAATAGTATTATTCGAACTAA ACAATGGGTAAAGGCACAAAAAGATTTCAACCAATCGAAAAATATACTTACTGTGGGAAATGGTGGTAATTTAGCCGTCT GTGACCATGGAGCCATTGATATAGCGCGTTTAACTAATAAAAATTCAAGCGCTCCAGGTAGTGGAATTCTTGCAAGTTCA TTGATTAATGATGCATCTCATGATCTTTGGGTAAAAAACTGGCTATCAATATCTATGAGATCTATGACTGAAGAAAATAA AAAAGAAACTATGATAATAGGAGTATCTTCATCTGGATACTCAAAAAACATCTGTCTAGCATTAGATCTTGCTATAGAGA ATGACATGTCTGCCTTGCTAATTTCAGCCCAAAAACCAAAAATAGCAGGGAAGTACAATACCATTATTCTCGATGTTAAT GAATTTCATACTAGTGAAGTTCTAACACTTTCTCTCTTTTATCAGTTAATTCATGGAGCAGGCTTTAATTGCCCAACAAT ATGTGAGTCGTCTGAAAGACAATTGATTTCTGATTACAAAAGACACTAA
Upstream 100 bases:
>100_bases TAGAATATCAAATTTTATACTATAGTAAATTTGAATTCTGTTAAAAAGTCCAAGATTAGTCCAAAGATGTTTAGAATATC CATAAACACAAAACTTTAAT
Downstream 100 bases:
>100_bases AATTAACATTAAACTTCCATTAAATACGAAAAATTGATTTTTCAATTTAATATTTATAGTGTTATGAGATTATTTCAAAA TTCCCTAATCTGCTTATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTVSNLTDAIPGFEDFSIKFNSIIRTKQWVKAQKDFNQSKNILTVGNGGNLAVCDHGAIDIARLTNKNSSAPGSGILASS LINDASHDLWVKNWLSISMRSMTEENKKETMIIGVSSSGYSKNICLALDLAIENDMSALLISAQKPKIAGKYNTIILDVN EFHTSEVLTLSLFYQLIHGAGFNCPTICESSERQLISDYKRH
Sequences:
>Translated_202_residues MTVSNLTDAIPGFEDFSIKFNSIIRTKQWVKAQKDFNQSKNILTVGNGGNLAVCDHGAIDIARLTNKNSSAPGSGILASS LINDASHDLWVKNWLSISMRSMTEENKKETMIIGVSSSGYSKNICLALDLAIENDMSALLISAQKPKIAGKYNTIILDVN EFHTSEVLTLSLFYQLIHGAGFNCPTICESSERQLISDYKRH >Mature_201_residues TVSNLTDAIPGFEDFSIKFNSIIRTKQWVKAQKDFNQSKNILTVGNGGNLAVCDHGAIDIARLTNKNSSAPGSGILASSL INDASHDLWVKNWLSISMRSMTEENKKETMIIGVSSSGYSKNICLALDLAIENDMSALLISAQKPKIAGKYNTIILDVNE FHTSEVLTLSLFYQLIHGAGFNCPTICESSERQLISDYKRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22202; Mature: 22070
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSNLTDAIPGFEDFSIKFNSIIRTKQWVKAQKDFNQSKNILTVGNGGNLAVCDHGAID CCCCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCEE IARLTNKNSSAPGSGILASSLINDASHDLWVKNWLSISMRSMTEENKKETMIIGVSSSGY EEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC SKNICLALDLAIENDMSALLISAQKPKIAGKYNTIILDVNEFHTSEVLTLSLFYQLIHGA CCCEEEEEEEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC GFNCPTICESSERQLISDYKRH CCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TVSNLTDAIPGFEDFSIKFNSIIRTKQWVKAQKDFNQSKNILTVGNGGNLAVCDHGAID CCCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCEE IARLTNKNSSAPGSGILASSLINDASHDLWVKNWLSISMRSMTEENKKETMIIGVSSSGY EEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC SKNICLALDLAIENDMSALLISAQKPKIAGKYNTIILDVNEFHTSEVLTLSLFYQLIHGA CCCEEEEEEEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC GFNCPTICESSERQLISDYKRH CCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA