| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is arnT1 [H]
Identifier: 126696770
GI number: 126696770
Start: 1200564
End: 1202108
Strand: Direct
Name: arnT1 [H]
Synonym: P9301_14321
Alternate gene names: 126696770
Gene position: 1200564-1202108 (Clockwise)
Preceding gene: 126696769
Following gene: 126696771
Centisome position: 73.12
GC content: 25.63
Gene sequence:
>1545_bases TTGGAATCAGTTAAAAATATAAAAAATTTTTGGCCTTTAATATTTTTGCCATTATTACTTTATTTGGGCGATCGTAGTTT AATAAGTACTGACGAAGGATATTATGCACTCCAAGCAAGATGGATACTTGAAACAGGAAACTGGCTTATACCTCAGTGGT GGGGAGAAGTAACTTTTGATAGGACTATTGGCATTCAATTTTTAATTGCTTTATCTCAAAAAGTTTTTGGTAAAAATGAA TTTTCAATATCTTTGCCTACTTCATTAGCTGCAATAATTAATATTTATCTTACTTACAAAATCCATAGAGAGATCTTAGA TAAAAAATACTCAATTATTTCGCCAATTATATTAAGTACTTTTTTCCTTTGGATTAATTATGCCCATATGGCAACTCAGG ATATGATTTTTAGTTCAATGATAACTTTTGGAATTTATTATTCCTTAAAATCCAAAATCCAGAAAAAGAATATTTATTTT TTCTTTTCTGGCTTTTGGATTGGACTCGCCATAATGATGAAAACTTATATGACCGTTTTACCAATAATCGCTATTTTACC ATTTTGGATTGAAAATAAAATAATTTTAAGAAGATATTTTTGGATAGGTTCATTACTTGGCATATTACCTTTTCTATTTT GGAGCTATAAAATTATATTGCTATACGGCTTTCCAGTTTATAACGGATTATATGAAAAGGTTCTTACACTTTCCGGAAAT AATACATTCACAAAATCTACATTTTATTATTTATGGAATTTACCACTAAATATATTTCCATGGTCTATCTTTTCTACAGT TGGCCTGGCTATAAACCTCAAAACAACAAATCCTAATATAAAATATTTTTTATTTTTTTATCCATTAACTATTTTATTTT TATTGAGTATTTTCTCTACTAAAACACCATATTATCCAATTCAAATACTACCTTTATTAGCAATTAATACATTCTTAGGC ATAAAAACCACTATTGAGAACCAAAACATAATTTTCAAATTTATTAAAAATTTTCATTTTAATTTCATTCCAATAATGTT TATTATCTTAGTTATTGGAGTCAGATTTGATTTCATAAACATTAATTTAGATAAGCAGCAAGAGATTTTTTTATATATTA GTTTTTTAACATTTTCAATAATTTGGTACTCTTTTAATTTTACAAAAAATTTAAAACAAAAACTTTTAATAATTATTTTA GGTCCATATTTATTGATGTCACTAATTGTCCAATCAGGATTATTAAATGATAGAAGTAAAGACCTTAGATTGGAAAGTGA GAGATTAGTAAAGGATGAAAAATTAATTGAAGAAAAAATAGAATTTGTTAATCAAGAGGCATCAAACGCTGAATCTCATT CTAAGATTATTAAGATTGCTTTGTTTATGCCCAAAATTGGAAATGGTATAGACGATATTAGTTTTCTAAAGCATAATCAA TATGCTTGGACAACTTCAGAAATCATATTAGAAAAAGAAGCTGAATATGAAATTATAACTAAATCAAAAATATTCAAACC TTGGAAATTGATTAAGAAAATTTAA
Upstream 100 bases:
>100_bases TAATTAAGCTACTTTCTTTTATGAAAAAGAATTTCTTTAAAGATGATTATTAATTAATATGAACTAGCATTAATTTGATA AATTATAAATCGATCAAGAA
Downstream 100 bases:
>100_bases TTTTAAATTAGGTTAATATGCAAAAAACATTTTTAATCGTTTTTATTATTTCTTTAAATTAATGCATAAAAAAGATATAT TACCCGTAATACTTTGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase 1; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase 1 [H]
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MESVKNIKNFWPLIFLPLLLYLGDRSLISTDEGYYALQARWILETGNWLIPQWWGEVTFDRTIGIQFLIALSQKVFGKNE FSISLPTSLAAIINIYLTYKIHREILDKKYSIISPIILSTFFLWINYAHMATQDMIFSSMITFGIYYSLKSKIQKKNIYF FFSGFWIGLAIMMKTYMTVLPIIAILPFWIENKIILRRYFWIGSLLGILPFLFWSYKIILLYGFPVYNGLYEKVLTLSGN NTFTKSTFYYLWNLPLNIFPWSIFSTVGLAINLKTTNPNIKYFLFFYPLTILFLLSIFSTKTPYYPIQILPLLAINTFLG IKTTIENQNIIFKFIKNFHFNFIPIMFIILVIGVRFDFININLDKQQEIFLYISFLTFSIIWYSFNFTKNLKQKLLIIIL GPYLLMSLIVQSGLLNDRSKDLRLESERLVKDEKLIEEKIEFVNQEASNAESHSKIIKIALFMPKIGNGIDDISFLKHNQ YAWTTSEIILEKEAEYEIITKSKIFKPWKLIKKI
Sequences:
>Translated_514_residues MESVKNIKNFWPLIFLPLLLYLGDRSLISTDEGYYALQARWILETGNWLIPQWWGEVTFDRTIGIQFLIALSQKVFGKNE FSISLPTSLAAIINIYLTYKIHREILDKKYSIISPIILSTFFLWINYAHMATQDMIFSSMITFGIYYSLKSKIQKKNIYF FFSGFWIGLAIMMKTYMTVLPIIAILPFWIENKIILRRYFWIGSLLGILPFLFWSYKIILLYGFPVYNGLYEKVLTLSGN NTFTKSTFYYLWNLPLNIFPWSIFSTVGLAINLKTTNPNIKYFLFFYPLTILFLLSIFSTKTPYYPIQILPLLAINTFLG IKTTIENQNIIFKFIKNFHFNFIPIMFIILVIGVRFDFININLDKQQEIFLYISFLTFSIIWYSFNFTKNLKQKLLIIIL GPYLLMSLIVQSGLLNDRSKDLRLESERLVKDEKLIEEKIEFVNQEASNAESHSKIIKIALFMPKIGNGIDDISFLKHNQ YAWTTSEIILEKEAEYEIITKSKIFKPWKLIKKI >Mature_514_residues MESVKNIKNFWPLIFLPLLLYLGDRSLISTDEGYYALQARWILETGNWLIPQWWGEVTFDRTIGIQFLIALSQKVFGKNE FSISLPTSLAAIINIYLTYKIHREILDKKYSIISPIILSTFFLWINYAHMATQDMIFSSMITFGIYYSLKSKIQKKNIYF FFSGFWIGLAIMMKTYMTVLPIIAILPFWIENKIILRRYFWIGSLLGILPFLFWSYKIILLYGFPVYNGLYEKVLTLSGN NTFTKSTFYYLWNLPLNIFPWSIFSTVGLAINLKTTNPNIKYFLFFYPLTILFLLSIFSTKTPYYPIQILPLLAINTFLG IKTTIENQNIIFKFIKNFHFNFIPIMFIILVIGVRFDFININLDKQQEIFLYISFLTFSIIWYSFNFTKNLKQKLLIIIL GPYLLMSLIVQSGLLNDRSKDLRLESERLVKDEKLIEEKIEFVNQEASNAESHSKIIKIALFMPKIGNGIDDISFLKHNQ YAWTTSEIILEKEAEYEIITKSKIFKPWKLIKKI
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 60539; Mature: 60539
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVKNIKNFWPLIFLPLLLYLGDRSLISTDEGYYALQARWILETGNWLIPQWWGEVTFD CCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEEEECCCEECCCCCCCEEEC RTIGIQFLIALSQKVFGKNEFSISLPTSLAAIINIYLTYKIHREILDKKYSIISPIILST HHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FFLWINYAHMATQDMIFSSMITFGIYYSLKSKIQKKNIYFFFSGFWIGLAIMMKTYMTVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHH PIIAILPFWIENKIILRRYFWIGSLLGILPFLFWSYKIILLYGFPVYNGLYEKVLTLSGN HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHEEECCC NTFTKSTFYYLWNLPLNIFPWSIFSTVGLAINLKTTNPNIKYFLFFYPLTILFLLSIFST CCEECCEEEEEEECCCHHCCHHHHHHCCEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHC KTPYYPIQILPLLAINTFLGIKTTIENQNIIFKFIKNFHFNFIPIMFIILVIGVRFDFIN CCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEE INLDKQQEIFLYISFLTFSIIWYSFNFTKNLKQKLLIIILGPYLLMSLIVQSGLLNDRSK EEECCCCCCEEHHHHHHHHHHHHEECCHHHHHHHEEEEEECHHHHHHHHHHHCCCCCCCC DLRLESERLVKDEKLIEEKIEFVNQEASNAESHSKIIKIALFMPKIGNGIDDISFLKHNQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEECCCCCCCCCHHHHHCCCC YAWTTSEIILEKEAEYEIITKSKIFKPWKLIKKI CEEEHHHHEEECCCCEEEEEHHHCCCHHHHHHCC >Mature Secondary Structure MESVKNIKNFWPLIFLPLLLYLGDRSLISTDEGYYALQARWILETGNWLIPQWWGEVTFD CCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEEEECCCEECCCCCCCEEEC RTIGIQFLIALSQKVFGKNEFSISLPTSLAAIINIYLTYKIHREILDKKYSIISPIILST HHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FFLWINYAHMATQDMIFSSMITFGIYYSLKSKIQKKNIYFFFSGFWIGLAIMMKTYMTVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHH PIIAILPFWIENKIILRRYFWIGSLLGILPFLFWSYKIILLYGFPVYNGLYEKVLTLSGN HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHEEECCC NTFTKSTFYYLWNLPLNIFPWSIFSTVGLAINLKTTNPNIKYFLFFYPLTILFLLSIFST CCEECCEEEEEEECCCHHCCHHHHHHCCEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHC KTPYYPIQILPLLAINTFLGIKTTIENQNIIFKFIKNFHFNFIPIMFIILVIGVRFDFIN CCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEE INLDKQQEIFLYISFLTFSIIWYSFNFTKNLKQKLLIIILGPYLLMSLIVQSGLLNDRSK EEECCCCCCEEHHHHHHHHHHHHEECCHHHHHHHEEEEEECHHHHHHHHHHHCCCCCCCC DLRLESERLVKDEKLIEEKIEFVNQEASNAESHSKIIKIALFMPKIGNGIDDISFLKHNQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEECCCCCCCCCHHHHHCCCC YAWTTSEIILEKEAEYEIITKSKIFKPWKLIKKI CEEEHHHHEEECCCCEEEEEHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA