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The map label for this gene is yfbG [C]

Identifier: 126696738

GI number: 126696738

Start: 1168305

End: 1169255

Strand: Direct

Name: yfbG [C]

Synonym: P9301_14001

Alternate gene names: 126696738

Gene position: 1168305-1169255 (Clockwise)

Preceding gene: 126696735

Following gene: 126696739

Centisome position: 71.16

GC content: 31.65

Gene sequence:

>951_bases
ATGGATAAACAACGTGATAGAAATTTAGTAACCGGAGGTGCTGGTTTTTTAGGTTCTCATCTTATTGATGCACTAATGGA
AAAAGGTGAAGAAGTAATATGTCTAGATAATTATTTCACAGGGCGGAAGCAAAATATAATTAAATGGATTAATCATCCAA
AATTCGAACTTATTCGACATGATGTTACCGAGCCCATTTTTCTGGAAATCGACAAAATATGGCATTTAGCTTGTCCAGCT
TCTCCTATTCACTACCAATATAATCCAATTAAAACCTCTAAAACTAGTTTTTTAGGAACTTATAATATGCTTGGATTGGC
AACAAGAACTAAAGCAAAACTACTTCTTGCCTCAACTAGTGAAGTTTACGGTAATCCCCTAATACATCCTCAAAAAGAAA
GTTATTTTGGAAATGTTAACAATATAGGAATTAGAAGTTGTTATGACGAAGGGAAAAGAATAGCTGAAACATTGTGTTTT
GATTATAACCGTATGCACAAAACTGAGATTAGCGTAATGAGAATATTTAATACCTTTGGACCTCGTATGCAAATAGATGA
TGGCAGGGTAGTAAGTAACTTTATAAATCAGGCTTTGCGTGGAGAAAATCTAACTGTATATGGAGATGGGTCACAAACAA
GAAGTTTTTGCTACGTGGAAGATTTAATAAACGGTATGATAAAACTTATGGAAAGTGAAGTAAAAGGACCTATAAATATA
GGAGCTCAAAATGAATTGAGAATAGATAAACTAGCTGAAATTATAATAAAAAAAATTAATCGAGAACTTAAAATAAATTT
TAATCCAATCCCTCAAGATGATCCTATTATGCGAAGACCTTCTATAGAAAAAGCAAAAAAAGAACTTGGTTGGTCCCCTA
CTGTAGATTTTGAAGAAGGCTTAGAAAAAACTATTAATTATTTTATTGAACTAAACAAGTTAAGTATTTAA

Upstream 100 bases:

>100_bases
TTTTTTAATTATTGCTTAATTTTACATTAAAGTCATATGGATTATAAATTTTTGAAGATTTTTCTTAAGATAAGAATTAT
TTGAACTAATTTTATATTTA

Downstream 100 bases:

>100_bases
TTGATTATGAAACAATTAAATACTGAAGCTTTAGAATCTATATTTGAAAATTATGATTATATATTCTGGGATTATGATGA
TACCTTATCTCCTACGGTGG

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MDKQRDRNLVTGGAGFLGSHLIDALMEKGEEVICLDNYFTGRKQNIIKWINHPKFELIRHDVTEPIFLEIDKIWHLACPA
SPIHYQYNPIKTSKTSFLGTYNMLGLATRTKAKLLLASTSEVYGNPLIHPQKESYFGNVNNIGIRSCYDEGKRIAETLCF
DYNRMHKTEISVMRIFNTFGPRMQIDDGRVVSNFINQALRGENLTVYGDGSQTRSFCYVEDLINGMIKLMESEVKGPINI
GAQNELRIDKLAEIIIKKINRELKINFNPIPQDDPIMRRPSIEKAKKELGWSPTVDFEEGLEKTINYFIELNKLSI

Sequences:

>Translated_316_residues
MDKQRDRNLVTGGAGFLGSHLIDALMEKGEEVICLDNYFTGRKQNIIKWINHPKFELIRHDVTEPIFLEIDKIWHLACPA
SPIHYQYNPIKTSKTSFLGTYNMLGLATRTKAKLLLASTSEVYGNPLIHPQKESYFGNVNNIGIRSCYDEGKRIAETLCF
DYNRMHKTEISVMRIFNTFGPRMQIDDGRVVSNFINQALRGENLTVYGDGSQTRSFCYVEDLINGMIKLMESEVKGPINI
GAQNELRIDKLAEIIIKKINRELKINFNPIPQDDPIMRRPSIEKAKKELGWSPTVDFEEGLEKTINYFIELNKLSI
>Mature_316_residues
MDKQRDRNLVTGGAGFLGSHLIDALMEKGEEVICLDNYFTGRKQNIIKWINHPKFELIRHDVTEPIFLEIDKIWHLACPA
SPIHYQYNPIKTSKTSFLGTYNMLGLATRTKAKLLLASTSEVYGNPLIHPQKESYFGNVNNIGIRSCYDEGKRIAETLCF
DYNRMHKTEISVMRIFNTFGPRMQIDDGRVVSNFINQALRGENLTVYGDGSQTRSFCYVEDLINGMIKLMESEVKGPINI
GAQNELRIDKLAEIIIKKINRELKINFNPIPQDDPIMRRPSIEKAKKELGWSPTVDFEEGLEKTINYFIELNKLSI

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=307, Percent_Identity=59.6091205211726, Blast_Score=389, Evalue=1e-108,
Organism=Homo sapiens, GI7657641, Length=325, Percent_Identity=28.6153846153846, Blast_Score=105, Evalue=6e-23,
Organism=Escherichia coli, GI1788589, Length=355, Percent_Identity=25.6338028169014, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1788353, Length=342, Percent_Identity=26.0233918128655, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI48994969, Length=336, Percent_Identity=25.297619047619, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1786974, Length=334, Percent_Identity=24.251497005988, Blast_Score=78, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17539532, Length=310, Percent_Identity=57.0967741935484, Blast_Score=375, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI17568069, Length=328, Percent_Identity=28.3536585365854, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI115532424, Length=321, Percent_Identity=27.1028037383178, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21356223, Length=306, Percent_Identity=57.1895424836601, Blast_Score=379, Evalue=1e-105,
Organism=Drosophila melanogaster, GI19923002, Length=259, Percent_Identity=27.4131274131274, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 36222; Mature: 36222

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQRDRNLVTGGAGFLGSHLIDALMEKGEEVICLDNYFTGRKQNIIKWINHPKFELIRH
CCCCCCCCEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHH
DVTEPIFLEIDKIWHLACPASPIHYQYNPIKTSKTSFLGTYNMLGLATRTKAKLLLASTS
CCCCCCEEEHHHHHEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECH
EVYGNPLIHPQKESYFGNVNNIGIRSCYDEGKRIAETLCFDYNRMHKTEISVMRIFNTFG
HHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRMQIDDGRVVSNFINQALRGENLTVYGDGSQTRSFCYVEDLINGMIKLMESEVKGPINI
CCEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEC
GAQNELRIDKLAEIIIKKINRELKINFNPIPQDDPIMRRPSIEKAKKELGWSPTVDFEEG
CCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHH
LEKTINYFIELNKLSI
HHHHHHHHEEEEEECC
>Mature Secondary Structure
MDKQRDRNLVTGGAGFLGSHLIDALMEKGEEVICLDNYFTGRKQNIIKWINHPKFELIRH
CCCCCCCCEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHH
DVTEPIFLEIDKIWHLACPASPIHYQYNPIKTSKTSFLGTYNMLGLATRTKAKLLLASTS
CCCCCCEEEHHHHHEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECH
EVYGNPLIHPQKESYFGNVNNIGIRSCYDEGKRIAETLCFDYNRMHKTEISVMRIFNTFG
HHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRMQIDDGRVVSNFINQALRGENLTVYGDGSQTRSFCYVEDLINGMIKLMESEVKGPINI
CCEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEC
GAQNELRIDKLAEIIIKKINRELKINFNPIPQDDPIMRRPSIEKAKKELGWSPTVDFEEG
CCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHH
LEKTINYFIELNKLSI
HHHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]