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The map label for this gene is yidC [H]

Identifier: 126696725

GI number: 126696725

Start: 1153575

End: 1154717

Strand: Direct

Name: yidC [H]

Synonym: P9301_13871

Alternate gene names: 126696725

Gene position: 1153575-1154717 (Clockwise)

Preceding gene: 126696724

Following gene: 126696726

Centisome position: 70.26

GC content: 37.1

Gene sequence:

>1143_bases
GTGATAGGGTTCATTTCTGAAAAACTACTTATCCCGATTCTAGATTTTTTCTACGGTTTAGTTCCTAGTTATGGTTTAGC
GATTGTCGCATTGACTGTCGTTATTAGAATTGCACTTTTCCCTTTAAGCGCTGGTTCCATTAGAAGTGCAAGGAGGATGA
AAATTGCCCAGCCAGTAATGCAAAAAAGACAAGCAGAAATAAAATCAAAATTTTCAGGTGACCCAAAAAAACAGCAAGAG
GAGCTTGGAAAATTAATGAACGAGTTTGGCAGTCCACTTGCAGGTTGCTTGCCTTTGATTGTACAAATGCCTGTTCTTTT
TGCACTTTTTGCAACTTTAAGGGGATCTCCTTTCGCTGATGTTCCTTACAACATAAATCTTAAGGTTGTCCCACAGGATC
AAATTGCAGCTATAGATCCAAAACCTTATAAATCTCCAAGACACTCTATATTCATAACAGAAAAATCACATTTTCCAGTA
ATAGCTACCATTCCCAACGGAACTAAATTAGGAACGGAAGAATCCATCAAAATTAGTCTCCAAACAACTAATGGCAATAG
CTACTCAGAAGTTTTATCTAAATATGACAATGGATCAAATTTTCTCCCTACTTGGAAGGTCTCAAAAGGCTCAGAGAATC
TAAAAGTTTCTCAAGACGGTACAGTAACTGCTATTAAACCAGGTGATGCAACAATTGAGGCAAAAATACCTGGTTTAGCC
GCAAAAAGTGGTTTCCTTTTTATTAAAGCTCTTGGTCAAGTTGGGTTTTATGTGGATGGGGCAATTAATTGGGATATTGC
AGCACTTGTTGGTGCCTTTGGATTAACCCTCCTTCTTTCTCAAGTTCTATCTAGTCAAGGGATGCCTGCTAATCCACAGC
AATCAACAGCAAACAAAATTACACCAGTTATGATTACTGGAATGTTTCTGTTTTTCCCACTACCAGCAGGAGTTTTACTG
TACATGGTTGTTGCTAATATATTTCAAGCATTTCAGACTTTTCTGCTTAATAAAGAGGCTCTTCCTGAGAATCTACAGAA
AATTCTTGATCAACAATTATTGGCCAAGAATGAAGTAATAACAACTACGGCTGCAACTATCTCAGATAAAAGATTACCTT
TTGAACCTAATAGTAAAAAATAG

Upstream 100 bases:

>100_bases
AGTTGAAGGATTTGCTACTAAATTCTAAATAAATTAATTACAAAAACCTTTTTTTCCTGTAAAATAAAATGTCTAATAAA
ATTACACTCTCTTTAATATC

Downstream 100 bases:

>100_bases
TCTGAATTTTACATAATGAATTCTTGGTGTAGAAATTTAGAATTACTCATAAAATCAAGAACTTCAATAATATGGATCAG
AACTAAAGAAGAGGAAAGAT

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKRQAEIKSKFSGDPKKQQE
ELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFADVPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPV
IATIPNGTKLGTEESIKISLQTTNGNSYSEVLSKYDNGSNFLPTWKVSKGSENLKVSQDGTVTAIKPGDATIEAKIPGLA
AKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQSTANKITPVMITGMFLFFPLPAGVLL
YMVVANIFQAFQTFLLNKEALPENLQKILDQQLLAKNEVITTTAATISDKRLPFEPNSKK

Sequences:

>Translated_380_residues
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKRQAEIKSKFSGDPKKQQE
ELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFADVPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPV
IATIPNGTKLGTEESIKISLQTTNGNSYSEVLSKYDNGSNFLPTWKVSKGSENLKVSQDGTVTAIKPGDATIEAKIPGLA
AKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQSTANKITPVMITGMFLFFPLPAGVLL
YMVVANIFQAFQTFLLNKEALPENLQKILDQQLLAKNEVITTTAATISDKRLPFEPNSKK
>Mature_380_residues
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKRQAEIKSKFSGDPKKQQE
ELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFADVPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPV
IATIPNGTKLGTEESIKISLQTTNGNSYSEVLSKYDNGSNFLPTWKVSKGSENLKVSQDGTVTAIKPGDATIEAKIPGLA
AKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQSTANKITPVMITGMFLFFPLPAGVLL
YMVVANIFQAFQTFLLNKEALPENLQKILDQQLLAKNEVITTTAATISDKRLPFEPNSKK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=126, Percent_Identity=31.7460317460317, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 41305; Mature: 41305

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QKRQAEIKSKFSGDPKKQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFAD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPVIATIPNGTKLGTEESIKISL
CCEEEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEE
QTTNGNSYSEVLSKYDNGSNFLPTWKVSKGSENLKVSQDGTVTAIKPGDATIEAKIPGLA
EECCCCCHHHHHHHCCCCCCCCCCEEECCCCCCEEECCCCCEEEECCCCCEEEEECCCCC
AKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQSTANKI
CCCCHHHEEEHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
TPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNKEALPENLQKILDQQLLAKNEVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHCCCEE
TTTAATISDKRLPFEPNSKK
EEEEHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QKRQAEIKSKFSGDPKKQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFAD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPVIATIPNGTKLGTEESIKISL
CCEEEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEE
QTTNGNSYSEVLSKYDNGSNFLPTWKVSKGSENLKVSQDGTVTAIKPGDATIEAKIPGLA
EECCCCCHHHHHHHCCCCCCCCCCEEECCCCCCEEECCCCCEEEECCCCCEEEEECCCCC
AKSGFLFIKALGQVGFYVDGAINWDIAALVGAFGLTLLLSQVLSSQGMPANPQQSTANKI
CCCCHHHEEEHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
TPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNKEALPENLQKILDQQLLAKNEVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHCCCEE
TTTAATISDKRLPFEPNSKK
EEEEHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]