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The map label for this gene is ydiU [C]

Identifier: 126696641

GI number: 126696641

Start: 1093066

End: 1094769

Strand: Direct

Name: ydiU [C]

Synonym: P9301_13031

Alternate gene names: 126696641

Gene position: 1093066-1094769 (Clockwise)

Preceding gene: 126696640

Following gene: 126696645

Centisome position: 66.57

GC content: 35.92

Gene sequence:

>1704_bases
ATGTCAACCAAGTCCAATTCATTAAAAGAAAAGCTTACGGAAAATTTTTCTGAATTTTCTCAATTATCCGACTATTCTTT
TATGAATTCTCTTAATGCAGATCCTCAATCAACAAAAGATGGAAATGATCATAAGCCGCGTTCAGTATATTCAGGTCATT
ACGTACCAGTTGTACCAACTGCTATTCCAGAACCAGAATATATTTCCCATAGCAAAAAACTTTTTAAAGAACTAAGGCTA
AGCTCAAATCTTACAAAAGACCAGAATTTTTGTCGTTTTTTCTCAGGTGATATTTCTGTTGCTAATTATCCAATGAGTCC
TGTTGGTTGGGCAACAGGTTATGCATTATCTATTTACGGGACTGAATATACCCAACAATGTCCCTTTGGCACTGGTAATG
GTTATGGCGATGGCAGAGCAATTTCTGTTTTTGAAGGTTTATTTAATGGGAAAAGAATGGAAATGCAACTTAAAGGAGGA
GGTCCAACTCCCTACTGTCGTGGAGCAGATGGTAGAGCTGTCTTAAGATCTAGCGTACGAGAATTTCTTGCACAGGAATT
AATGGATGCCTTAGGAATCCCTACCTCAAGATCCTTAACACTTTATGTTTCACGTTCAGAAATAGTTAGAAGACCGTGGT
ACTCCAAAGGGTCCAGGTATTTTGAACCTGACATCATGATTGATAATCAAGCGGCAATTACTACGAGAGTTGCTCCATCT
TTTTTACGTGTAGGCCAGATTGAACTTTTTGCAAGACGAGTTCGTAATAATGCACATGATGAGGCCCTCAATGAACTAAA
GATGATAGTTAAACATCTTATTCATAGAAATTATAAAGATGAAATTGATAATGAGATTTCAATTGAAAGTAAGGTAATAA
AACTGGCTTCTTTATACAGATCAAGACTGATATCACTTATAGCCAACTGGATGCGAGTTGGTTATTGCCAGGGTAACTTC
AATAGTGATAATTGTGCTGCTGGAGGTTATACCTTGGATTATGGCCCCTTTGGATTTTGTGAATTATTTGATCCAAGATT
TCAACCATGGACAGGTGGAGGTGAACATTTCTCATTTTTCAACCAACCTTTTGCTGCGGCAATCAACTTTAAAACATTCT
GTTCCTCTCTTAGTCCGTTACTTTCAGGAAACAAACAAGATCAAGGAAAGTTAGATCAAATCGAAAAGGATTTTTCAGAA
TTGATGAACAAAGAGTTGAAGAAAATGTGGGCAAACAAGCTTGGTTTAGAACATTACAACGAAACTCTAATAAATGAATT
TTTTAATCTCATGGTCATTTCAAAAGCAGACTATACAATTTTGTTCCGTAAACTCTCTGAAATACCTGATAACTCATATT
CGTTAAAAGACAGTTTCTATTTTCCAATTGATGATGAGCTCAATAATAGATGGGAAGTATGGCTTAAAAACTGGCAATCA
ATCTTGAAGAAAGAGGGAAATATTAAAGCGAAATCAGCATTAATGAAATCCCTTAATCCAGTCTATACTTGGCGCGAATG
GATGGTGGTTCCCGCATATGAAGAAGCTGAAAAGGGAAATTACAAAAAGATAAAAGAGTTACAGGATATCTTTAGCAATC
CATATATAGAACAACCCTCAGAAATAGATCAAAAATATAATCGACTAAAACCAAGCCAGTATTTTAACTATGGAGGCGTA
TCTCACTACAGCTGTTCTTCATAA

Upstream 100 bases:

>100_bases
ATAACGAAAGAAAACATCCCTGATAAAAAGATATATAAGATATATCTAGATGTTGAATTTAAAGAAATTACAACGTAATC
AACAATAGATTAAAAATTTA

Downstream 100 bases:

>100_bases
AATTTCAATCCTCATGTAGATTGAACAACTTTGAGGAAAATCTTATTTATTTATGGCCGTAGGCATTCCAACTACTGATA
CAACTCCCACATGAAGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MSTKSNSLKEKLTENFSEFSQLSDYSFMNSLNADPQSTKDGNDHKPRSVYSGHYVPVVPTAIPEPEYISHSKKLFKELRL
SSNLTKDQNFCRFFSGDISVANYPMSPVGWATGYALSIYGTEYTQQCPFGTGNGYGDGRAISVFEGLFNGKRMEMQLKGG
GPTPYCRGADGRAVLRSSVREFLAQELMDALGIPTSRSLTLYVSRSEIVRRPWYSKGSRYFEPDIMIDNQAAITTRVAPS
FLRVGQIELFARRVRNNAHDEALNELKMIVKHLIHRNYKDEIDNEISIESKVIKLASLYRSRLISLIANWMRVGYCQGNF
NSDNCAAGGYTLDYGPFGFCELFDPRFQPWTGGGEHFSFFNQPFAAAINFKTFCSSLSPLLSGNKQDQGKLDQIEKDFSE
LMNKELKKMWANKLGLEHYNETLINEFFNLMVISKADYTILFRKLSEIPDNSYSLKDSFYFPIDDELNNRWEVWLKNWQS
ILKKEGNIKAKSALMKSLNPVYTWREWMVVPAYEEAEKGNYKKIKELQDIFSNPYIEQPSEIDQKYNRLKPSQYFNYGGV
SHYSCSS

Sequences:

>Translated_567_residues
MSTKSNSLKEKLTENFSEFSQLSDYSFMNSLNADPQSTKDGNDHKPRSVYSGHYVPVVPTAIPEPEYISHSKKLFKELRL
SSNLTKDQNFCRFFSGDISVANYPMSPVGWATGYALSIYGTEYTQQCPFGTGNGYGDGRAISVFEGLFNGKRMEMQLKGG
GPTPYCRGADGRAVLRSSVREFLAQELMDALGIPTSRSLTLYVSRSEIVRRPWYSKGSRYFEPDIMIDNQAAITTRVAPS
FLRVGQIELFARRVRNNAHDEALNELKMIVKHLIHRNYKDEIDNEISIESKVIKLASLYRSRLISLIANWMRVGYCQGNF
NSDNCAAGGYTLDYGPFGFCELFDPRFQPWTGGGEHFSFFNQPFAAAINFKTFCSSLSPLLSGNKQDQGKLDQIEKDFSE
LMNKELKKMWANKLGLEHYNETLINEFFNLMVISKADYTILFRKLSEIPDNSYSLKDSFYFPIDDELNNRWEVWLKNWQS
ILKKEGNIKAKSALMKSLNPVYTWREWMVVPAYEEAEKGNYKKIKELQDIFSNPYIEQPSEIDQKYNRLKPSQYFNYGGV
SHYSCSS
>Mature_566_residues
STKSNSLKEKLTENFSEFSQLSDYSFMNSLNADPQSTKDGNDHKPRSVYSGHYVPVVPTAIPEPEYISHSKKLFKELRLS
SNLTKDQNFCRFFSGDISVANYPMSPVGWATGYALSIYGTEYTQQCPFGTGNGYGDGRAISVFEGLFNGKRMEMQLKGGG
PTPYCRGADGRAVLRSSVREFLAQELMDALGIPTSRSLTLYVSRSEIVRRPWYSKGSRYFEPDIMIDNQAAITTRVAPSF
LRVGQIELFARRVRNNAHDEALNELKMIVKHLIHRNYKDEIDNEISIESKVIKLASLYRSRLISLIANWMRVGYCQGNFN
SDNCAAGGYTLDYGPFGFCELFDPRFQPWTGGGEHFSFFNQPFAAAINFKTFCSSLSPLLSGNKQDQGKLDQIEKDFSEL
MNKELKKMWANKLGLEHYNETLINEFFNLMVISKADYTILFRKLSEIPDNSYSLKDSFYFPIDDELNNRWEVWLKNWQSI
LKKEGNIKAKSALMKSLNPVYTWREWMVVPAYEEAEKGNYKKIKELQDIFSNPYIEQPSEIDQKYNRLKPSQYFNYGGVS
HYSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=423, Percent_Identity=29.5508274231678, Blast_Score=154, Evalue=2e-37,
Organism=Escherichia coli, GI1787999, Length=527, Percent_Identity=31.3092979127135, Blast_Score=203, Evalue=2e-53,
Organism=Saccharomyces cerevisiae, GI6325034, Length=409, Percent_Identity=28.361858190709, Blast_Score=139, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 64967; Mature: 64836

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKSNSLKEKLTENFSEFSQLSDYSFMNSLNADPQSTKDGNDHKPRSVYSGHYVPVVPT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
AIPEPEYISHSKKLFKELRLSSNLTKDQNFCRFFSGDISVANYPMSPVGWATGYALSIYG
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEC
TEYTQQCPFGTGNGYGDGRAISVFEGLFNGKRMEMQLKGGGPTPYCRGADGRAVLRSSVR
CCHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
EFLAQELMDALGIPTSRSLTLYVSRSEIVRRPWYSKGSRYFEPDIMIDNQAAITTRVAPS
HHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCCCCCEECCCEEECCCCHHHHHHCHH
FLRVGQIELFARRVRNNAHDEALNELKMIVKHLIHRNYKDEIDNEISIESKVIKLASLYR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHH
SRLISLIANWMRVGYCQGNFNSDNCAAGGYTLDYGPFGFCELFDPRFQPWTGGGEHFSFF
HHHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCCHHHH
NQPFAAAINFKTFCSSLSPLLSGNKQDQGKLDQIEKDFSELMNKELKKMWANKLGLEHYN
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
ETLINEFFNLMVISKADYTILFRKLSEIPDNSYSLKDSFYFPIDDELNNRWEVWLKNWQS
HHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCEECCCCEECCCCCCCCCHHHHHHHHHHH
ILKKEGNIKAKSALMKSLNPVYTWREWMVVPAYEEAEKGNYKKIKELQDIFSNPYIEQPS
HHHCCCCCHHHHHHHHHCCHHEEEHHEEEECCHHHHCCCCHHHHHHHHHHHCCCCCCCCH
EIDQKYNRLKPSQYFNYGGVSHYSCSS
HHHHHHHHCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
STKSNSLKEKLTENFSEFSQLSDYSFMNSLNADPQSTKDGNDHKPRSVYSGHYVPVVPT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
AIPEPEYISHSKKLFKELRLSSNLTKDQNFCRFFSGDISVANYPMSPVGWATGYALSIYG
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEC
TEYTQQCPFGTGNGYGDGRAISVFEGLFNGKRMEMQLKGGGPTPYCRGADGRAVLRSSVR
CCHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
EFLAQELMDALGIPTSRSLTLYVSRSEIVRRPWYSKGSRYFEPDIMIDNQAAITTRVAPS
HHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCCCCCEECCCEEECCCCHHHHHHCHH
FLRVGQIELFARRVRNNAHDEALNELKMIVKHLIHRNYKDEIDNEISIESKVIKLASLYR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHH
SRLISLIANWMRVGYCQGNFNSDNCAAGGYTLDYGPFGFCELFDPRFQPWTGGGEHFSFF
HHHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCCHHHH
NQPFAAAINFKTFCSSLSPLLSGNKQDQGKLDQIEKDFSELMNKELKKMWANKLGLEHYN
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
ETLINEFFNLMVISKADYTILFRKLSEIPDNSYSLKDSFYFPIDDELNNRWEVWLKNWQS
HHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCEECCCCEECCCCCCCCCHHHHHHHHHHH
ILKKEGNIKAKSALMKSLNPVYTWREWMVVPAYEEAEKGNYKKIKELQDIFSNPYIEQPS
HHHCCCCCHHHHHHHHHCCHHEEEHHEEEECCHHHHCCCCHHHHHHHHHHHCCCCCCCCH
EIDQKYNRLKPSQYFNYGGVSHYSCSS
HHHHHHHHCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA