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The map label for this gene is 126696578

Identifier: 126696578

GI number: 126696578

Start: 1053245

End: 1054594

Strand: Direct

Name: 126696578

Synonym: P9301_12401

Alternate gene names: NA

Gene position: 1053245-1054594 (Clockwise)

Preceding gene: 126696576

Following gene: 126696584

Centisome position: 64.15

GC content: 38.3

Gene sequence:

>1350_bases
ATGAAACTTTTTCAAAAATTAATTGCTGCTCCTGCAATCATTTCACTTGTTTCAGGATTTGCAGTAAATGCTGCTGAGAT
CAATACATCTGATCTTAGTGATTATTCTAGTACTAACAATTTAGTATCTTTAGACAACTTTAAATCAGAAACTTTAGTCC
CTGGAGATTGGGCTTACGATTCATTAAAGGATCTTACAAATAGTTCAAAATTCAATGGAAACTCAGTTACTCGTTTAGAA
GCTGCCGCTGAATTAAACAACTTAATTGCAGGCAGTGAAGGCTTAATGAACGGAGCTGCGATTGATAGACTTAGTGATGA
GCTTGGTTCTGAGTTGGCAATTATGAAAGGAAGAGTGGATGGCCTCGAATCTCGTGTAAATACAATCGAAGCTGGAAGTT
TTTCTGAGACATCTACTATTTCATTCAAAGCTCGGATGGCAATCGGTGCTGTTGATGGTAAAGGTGTAACAGCCACAGTT
ACTGATGGTGACGAAGCTGTTAATTTCCAATACACTTTTGATTCTGCAATAAAAACTAGTTTTACTGGTGATGATTCATT
AACAGTAAAAATTGATTCTGGTAATGGAACAAGTGGTAATCCAGTCGATGAATTCGACCTTAACAATACAGACGACTTTC
TTAAAGTCGACGGTGTTGCATACAAATTTCCTTTGGGAGATAACTTGACTGCTCTCGTTTCTGACGGGTATGACGGTAGT
AAAATATTCACAACAGCATGTGCTTATGGTGGTCCATCCAACACTCTTGATGATTGTGGTAATGTAAACGCAAATATCGA
TAATGCTGGTGCTTCTGCAATGGCTGAATATGATTTCGGTAATGGCTTTACTGCTGCTGTAGGTTATGCAGGTAATGAAG
AAGGTCTTATGACTACAGCTAAAAATGACGCTTACGGTGCTAACTTAGCTTATATTGCTGATAACTACGGCGTTTCTTTA
ACTTACGGAATGCAAGAGGATGGTGCTAGTAACGAAACATATACAGCATTAAACGGTTTCTATTCATTTGATAACGGTTT
AAACATCAGTGCTGGTTATGAAGTCGGAGATCTCGATGTTGCTGACGCAAATGTGGACGAAACATTAGCGTACTTCGTCG
GAATTAACGGTGATGTAGGTCCAGGTGAACTTGGTGCTGCTGTAGGTACTAATGGATCTATGACTGAATCTGCTGGTTCT
ATAACTGAAGAGATGATGTATGAAGTATATTATGACTACCCATTAAATGATGGTATGACTATTACTCCTCTTGTTTTCGT
CAAGGAGTCATCAACAGCTGGCACTCCAGATCAAACTGGTGTAATGGTTAAAACAACATTTAAATTCTAA

Upstream 100 bases:

>100_bases
TCTTTAAATTTCCTTTTTGACTTTATTTCTTACCCGTTTCTTAACCTAAATTCGTTCATATGTAGATGGATTATTATCCA
TTTCTACGTGTTTGAGGAAC

Downstream 100 bases:

>100_bases
ATTAAAGTTTAATTTAGAAATCTTACACACATTAAAAAGACCTGCTAAATACAGGTCTTTTTTTTTACCTTTAAGAATTT
AAATTTTTATTATATATCGG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MKLFQKLIAAPAIISLVSGFAVNAAEINTSDLSDYSSTNNLVSLDNFKSETLVPGDWAYDSLKDLTNSSKFNGNSVTRLE
AAAELNNLIAGSEGLMNGAAIDRLSDELGSELAIMKGRVDGLESRVNTIEAGSFSETSTISFKARMAIGAVDGKGVTATV
TDGDEAVNFQYTFDSAIKTSFTGDDSLTVKIDSGNGTSGNPVDEFDLNNTDDFLKVDGVAYKFPLGDNLTALVSDGYDGS
KIFTTACAYGGPSNTLDDCGNVNANIDNAGASAMAEYDFGNGFTAAVGYAGNEEGLMTTAKNDAYGANLAYIADNYGVSL
TYGMQEDGASNETYTALNGFYSFDNGLNISAGYEVGDLDVADANVDETLAYFVGINGDVGPGELGAAVGTNGSMTESAGS
ITEEMMYEVYYDYPLNDGMTITPLVFVKESSTAGTPDQTGVMVKTTFKF

Sequences:

>Translated_449_residues
MKLFQKLIAAPAIISLVSGFAVNAAEINTSDLSDYSSTNNLVSLDNFKSETLVPGDWAYDSLKDLTNSSKFNGNSVTRLE
AAAELNNLIAGSEGLMNGAAIDRLSDELGSELAIMKGRVDGLESRVNTIEAGSFSETSTISFKARMAIGAVDGKGVTATV
TDGDEAVNFQYTFDSAIKTSFTGDDSLTVKIDSGNGTSGNPVDEFDLNNTDDFLKVDGVAYKFPLGDNLTALVSDGYDGS
KIFTTACAYGGPSNTLDDCGNVNANIDNAGASAMAEYDFGNGFTAAVGYAGNEEGLMTTAKNDAYGANLAYIADNYGVSL
TYGMQEDGASNETYTALNGFYSFDNGLNISAGYEVGDLDVADANVDETLAYFVGINGDVGPGELGAAVGTNGSMTESAGS
ITEEMMYEVYYDYPLNDGMTITPLVFVKESSTAGTPDQTGVMVKTTFKF
>Mature_449_residues
MKLFQKLIAAPAIISLVSGFAVNAAEINTSDLSDYSSTNNLVSLDNFKSETLVPGDWAYDSLKDLTNSSKFNGNSVTRLE
AAAELNNLIAGSEGLMNGAAIDRLSDELGSELAIMKGRVDGLESRVNTIEAGSFSETSTISFKARMAIGAVDGKGVTATV
TDGDEAVNFQYTFDSAIKTSFTGDDSLTVKIDSGNGTSGNPVDEFDLNNTDDFLKVDGVAYKFPLGDNLTALVSDGYDGS
KIFTTACAYGGPSNTLDDCGNVNANIDNAGASAMAEYDFGNGFTAAVGYAGNEEGLMTTAKNDAYGANLAYIADNYGVSL
TYGMQEDGASNETYTALNGFYSFDNGLNISAGYEVGDLDVADANVDETLAYFVGINGDVGPGELGAAVGTNGSMTESAGS
ITEEMMYEVYYDYPLNDGMTITPLVFVKESSTAGTPDQTGVMVKTTFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 47012; Mature: 47012

Theoretical pI: Translated: 3.70; Mature: 3.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFQKLIAAPAIISLVSGFAVNAAEINTSDLSDYSSTNNLVSLDNFKSETLVPGDWAYD
CHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHH
SLKDLTNSSKFNGNSVTRLEAAAELNNLIAGSEGLMNGAAIDRLSDELGSELAIMKGRVD
HHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCHH
GLESRVNTIEAGSFSETSTISFKARMAIGAVDGKGVTATVTDGDEAVNFQYTFDSAIKTS
HHHHHHCEEECCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCCEEEEEEEECCHHEEE
FTGDDSLTVKIDSGNGTSGNPVDEFDLNNTDDFLKVDGVAYKFPLGDNLTALVSDGYDGS
ECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCEEEEEECCCCCC
KIFTTACAYGGPSNTLDDCGNVNANIDNAGASAMAEYDFGNGFTAAVGYAGNEEGLMTTA
EEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEE
KNDAYGANLAYIADNYGVSLTYGMQEDGASNETYTALNGFYSFDNGLNISAGYEVGDLDV
CCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEECEEECCCCEEEECCCEECCEEE
ADANVDETLAYFVGINGDVGPGELGAAVGTNGSMTESAGSITEEMMYEVYYDYPLNDGMT
CCCCHHCEEEEEEECCCCCCCCHHCCEECCCCCCCCCHHHHHHHHEEEEEEECCCCCCCE
ITPLVFVKESSTAGTPDQTGVMVKTTFKF
EEEEEEEECCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKLFQKLIAAPAIISLVSGFAVNAAEINTSDLSDYSSTNNLVSLDNFKSETLVPGDWAYD
CHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHH
SLKDLTNSSKFNGNSVTRLEAAAELNNLIAGSEGLMNGAAIDRLSDELGSELAIMKGRVD
HHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCHH
GLESRVNTIEAGSFSETSTISFKARMAIGAVDGKGVTATVTDGDEAVNFQYTFDSAIKTS
HHHHHHCEEECCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCCEEEEEEEECCHHEEE
FTGDDSLTVKIDSGNGTSGNPVDEFDLNNTDDFLKVDGVAYKFPLGDNLTALVSDGYDGS
ECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCEEEEEECCCCCC
KIFTTACAYGGPSNTLDDCGNVNANIDNAGASAMAEYDFGNGFTAAVGYAGNEEGLMTTA
EEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEE
KNDAYGANLAYIADNYGVSLTYGMQEDGASNETYTALNGFYSFDNGLNISAGYEVGDLDV
CCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEECEEECCCCEEEECCCEECCEEE
ADANVDETLAYFVGINGDVGPGELGAAVGTNGSMTESAGSITEEMMYEVYYDYPLNDGMT
CCCCHHCEEEEEEECCCCCCCCHHCCEECCCCCCCCCHHHHHHHHEEEEEEECCCCCCCE
ITPLVFVKESSTAGTPDQTGVMVKTTFKF
EEEEEEEECCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]