Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is yrbA [C]

Identifier: 126696555

GI number: 126696555

Start: 1034815

End: 1035045

Strand: Direct

Name: yrbA [C]

Synonym: P9301_12171

Alternate gene names: 126696555

Gene position: 1034815-1035045 (Clockwise)

Preceding gene: 126696554

Following gene: 126696556

Centisome position: 63.03

GC content: 31.6

Gene sequence:

>231_bases
ATGATTACTAAAACAGAGGTTATTAATTTAATCACTAAAAAAATTCCAAGTTCCAAAGTTTTTGTTGAAAACCTTAAGGG
AAATGATCATTTACAAGTTACTGTAATTGCATCTGAATTCCATGGATTATCATTAGTTAAACAACACCAGCTAGTCTATT
CTGCTTTGAAGGAAGAATTAGCTTCAGAGGCTATCCATGCACTGGCATTAAAAACAGAAACTCCAAATTGA

Upstream 100 bases:

>100_bases
AGAATAATGTCACCTAACACTCCAGAAGGTAAAGAAGCTTATGAAAGATTGATCCAACTAGGATTTGTTGAGACAAAATA
CAAAGGTTAATTAAAAAAAT

Downstream 100 bases:

>100_bases
ATTATGGACAAACTAACAAAAGATAAAATACAAAAACTGATTGATTCTAATCCAGTAATGGTTTTCATGAAAGGGACAAA
ATTAATGCCTCAATGCGGTT

Product: BolA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MITKTEVINLITKKIPSSKVFVENLKGNDHLQVTVIASEFHGLSLVKQHQLVYSALKEELASEAIHALALKTETPN

Sequences:

>Translated_76_residues
MITKTEVINLITKKIPSSKVFVENLKGNDHLQVTVIASEFHGLSLVKQHQLVYSALKEELASEAIHALALKTETPN
>Mature_76_residues
MITKTEVINLITKKIPSSKVFVENLKGNDHLQVTVIASEFHGLSLVKQHQLVYSALKEELASEAIHALALKTETPN

Specific function: Unknown

COG id: COG0271

COG function: function code T; Stress-induced morphogen (activity unknown)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 8409; Mature: 8409

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITKTEVINLITKKIPSSKVFVENLKGNDHLQVTVIASEFHGLSLVKQHQLVYSALKEEL
CCCHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
ASEAIHALALKTETPN
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MITKTEVINLITKKIPSSKVFVENLKGNDHLQVTVIASEFHGLSLVKQHQLVYSALKEEL
CCCHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
ASEAIHALALKTETPN
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]