| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696524
Identifier: 126696524
GI number: 126696524
Start: 998649
End: 999008
Strand: Direct
Name: 126696524
Synonym: P9301_11861
Alternate gene names: NA
Gene position: 998649-999008 (Clockwise)
Preceding gene: 126696523
Following gene: 126696526
Centisome position: 60.82
GC content: 30.28
Gene sequence:
>360_bases TTGAATGCAAATGTTAAAAATTCTCCTGCAAATAAAAATGATTTAGATTTATATCATGGGATGGGAGTTTCATTTTTGTG TAATGCGACAAGAAAGGGATTTGATTTAGATTTCCCAAAAACATTAAACGTAGCTTCAGCAACTTTCGCATCAGTAGTTT CACAAAAACATGGAGGGAAAATAATAGAAAGGAAGAAAGAACAAACAGTTGATATAAAGAAATTACAATTTATTGCATCT CTGCAGTTAGTTGAATCAGCTCTTCAAGTGTGTCCAGATAATGTTCCAGAAAAGATTAAAAAACAATTCAAAATTGAAAC TGAGAGACTCAAAAAATTAAAAGGATCAGGGAAAAAATAA
Upstream 100 bases:
>100_bases TAATATATGAATTAAAAATGAATCAAATATGTGTTTTAAGATATCTAAAATTTTTGCAATCCCCCTAATTTCTTCAACTT TTTTGTTTGGTTTTAACAAC
Downstream 100 bases:
>100_bases TTTCTTTTATCTAAACATAGAACTAACAGAACTTTCCTCGTGAATTCTCCAAATAGCCTCACCCAACATATTCGCAACAG AAAGAACTTTTAACTGCGGA
Product: Villin headpiece domain-containing protein
Products: NA
Alternate protein names: CAMP Phosphodiesterase Class-II; CAMP Phosphodiesterases Class-II
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MNANVKNSPANKNDLDLYHGMGVSFLCNATRKGFDLDFPKTLNVASATFASVVSQKHGGKIIERKKEQTVDIKKLQFIAS LQLVESALQVCPDNVPEKIKKQFKIETERLKKLKGSGKK
Sequences:
>Translated_119_residues MNANVKNSPANKNDLDLYHGMGVSFLCNATRKGFDLDFPKTLNVASATFASVVSQKHGGKIIERKKEQTVDIKKLQFIAS LQLVESALQVCPDNVPEKIKKQFKIETERLKKLKGSGKK >Mature_119_residues MNANVKNSPANKNDLDLYHGMGVSFLCNATRKGFDLDFPKTLNVASATFASVVSQKHGGKIIERKKEQTVDIKKLQFIAS LQLVESALQVCPDNVPEKIKKQFKIETERLKKLKGSGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13233; Mature: 13233
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANVKNSPANKNDLDLYHGMGVSFLCNATRKGFDLDFPKTLNVASATFASVVSQKHGGK CCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH IIERKKEQTVDIKKLQFIASLQLVESALQVCPDNVPEKIKKQFKIETERLKKLKGSGKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCC >Mature Secondary Structure MNANVKNSPANKNDLDLYHGMGVSFLCNATRKGFDLDFPKTLNVASATFASVVSQKHGGK CCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH IIERKKEQTVDIKKLQFIASLQLVESALQVCPDNVPEKIKKQFKIETERLKKLKGSGKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA