| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696483
Identifier: 126696483
GI number: 126696483
Start: 960660
End: 961517
Strand: Direct
Name: 126696483
Synonym: P9301_11451
Alternate gene names: NA
Gene position: 960660-961517 (Clockwise)
Preceding gene: 126696482
Following gene: 126696484
Centisome position: 58.51
GC content: 34.62
Gene sequence:
>858_bases ATGAGAATTAAATACATTCACAAACTTGAATATAAATACGAAGACCCTGTTCAATTAGGCGAGCATAGATTATGTATAAA GCCAAGGTCAAATGGATTCCAAAAGCTAAAGAATTTTGAATTAAAAATAACCCCAGAACCAGAAATTATTTATCCATTAC TTGCGGCCAGCGGGGAAGAGATTAATAGAATCAGATTTAATGGATTAACAGATAATTTAATTATTGAATCAGTCAGTGAA GTTGAAACTATTAAACATCCAAACATTATTGATGGAGTTAAAAATAGAGATTTAACATTACCTTTTTGTAGAAGCATTAT TAACAGAGATTTACAGGGAGCATTAGAGGGATGGATGCCAAATGGACAACACGATCCCGCTGCAGTAGAACTTGCTCAAG AAGCCTTAGCAGGAAGCATTAATAACGCATTATCATTTACCTACCAACTAATAGAGATTATTCAAGATCGGGTTAAATAT ACCAAAAGACACACTGGTCCAGCATGGCCGGCTAGCAGAACACTTAGAGAACGTATAGGTTCATGCAGAGATTTAGCAAT GCTTATGGTTGAAGCTTGCAGGTCTATAGGTATCCCAAGTAGGTTTGTAAGTGGTTATCATTTTGAAGATCCGTTACCAT CTGAGTTGGATTTACACGCTTGGGCTGAATTATATATTCCAGGTGCTGGTTGGAGAGGTTTTGATCCAAGCGGAAAAGGA TTAATAGATGATAGATATTTAACATTGGTATCCTCTTCAAAATCTAATTTAACCTCTGTAATTACAGGAAACTTTATAGG AAAAAATAATTTAGAAAATACTTTATCCTGGGAAATCAAACCTCTTGAAATTAAATAA
Upstream 100 bases:
>100_bases ATGATGGTTTACATGAGGCGATTGATTCATTGCAAATGGATTTAAATAAATTAAATGATCTCATTCAAGAAAAATATTTT ATTAATTAATAAGTTTATTA
Downstream 100 bases:
>100_bases ACACTAAATTTTTAATCTTTTAAAATAACAAAACAATATAAATAATAATATGTTTCTTTTTTAGTGTTAATTGATACGTT CTTGTATATATATATCTGTT
Product: transglutaminase-like superfamily protein
Products: NA
Alternate protein names: Transglutaminase Domain-Containing Protein; Transglutaminase-Like; Transglutaminase-Like Protein; Transglutaminase-Like Superfamily Protein; Bacterial Transglutaminase Domain Family Protein; Transglutaminase Family Protein; Transglutaminase-Like Domain Protein; Bacterial Transglutaminase-Like Domain Family Protein; Transglutaminase; Transglutaminase-Like Domain-Containing Protein; Transglutaminase N-Terminal Domain Protein; Protease; Transglutaminase-Like Cysteine Protease; Cysteine Proteinase Transglutaminase-Like Superfamily; Transglutaminase-Like Family Protein; IMP Dehydrogenase; Malate Oxidoreductase; Transglutaminase N-Domain Protein; Cysteine Protease; Transglutaminase DomaiN-Containing Protein; Transglutaminase-Like Super Family Protein; Transglutaminase Protein; Transglutaminase/Protease-Like Protein; Transglutaminase-Like Superfamily Domain-Containing Protein; Transglutaminase-Like S Cysteineprotease; Transglutaminase-Like Superfamily Domain Protein
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MRIKYIHKLEYKYEDPVQLGEHRLCIKPRSNGFQKLKNFELKITPEPEIIYPLLAASGEEINRIRFNGLTDNLIIESVSE VETIKHPNIIDGVKNRDLTLPFCRSIINRDLQGALEGWMPNGQHDPAAVELAQEALAGSINNALSFTYQLIEIIQDRVKY TKRHTGPAWPASRTLRERIGSCRDLAMLMVEACRSIGIPSRFVSGYHFEDPLPSELDLHAWAELYIPGAGWRGFDPSGKG LIDDRYLTLVSSSKSNLTSVITGNFIGKNNLENTLSWEIKPLEIK
Sequences:
>Translated_285_residues MRIKYIHKLEYKYEDPVQLGEHRLCIKPRSNGFQKLKNFELKITPEPEIIYPLLAASGEEINRIRFNGLTDNLIIESVSE VETIKHPNIIDGVKNRDLTLPFCRSIINRDLQGALEGWMPNGQHDPAAVELAQEALAGSINNALSFTYQLIEIIQDRVKY TKRHTGPAWPASRTLRERIGSCRDLAMLMVEACRSIGIPSRFVSGYHFEDPLPSELDLHAWAELYIPGAGWRGFDPSGKG LIDDRYLTLVSSSKSNLTSVITGNFIGKNNLENTLSWEIKPLEIK >Mature_285_residues MRIKYIHKLEYKYEDPVQLGEHRLCIKPRSNGFQKLKNFELKITPEPEIIYPLLAASGEEINRIRFNGLTDNLIIESVSE VETIKHPNIIDGVKNRDLTLPFCRSIINRDLQGALEGWMPNGQHDPAAVELAQEALAGSINNALSFTYQLIEIIQDRVKY TKRHTGPAWPASRTLRERIGSCRDLAMLMVEACRSIGIPSRFVSGYHFEDPLPSELDLHAWAELYIPGAGWRGFDPSGKG LIDDRYLTLVSSSKSNLTSVITGNFIGKNNLENTLSWEIKPLEIK
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32242; Mature: 32242
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKYIHKLEYKYEDPVQLGEHRLCIKPRSNGFQKLKNFELKITPEPEIIYPLLAASGEE CCCEEEEEECCCCCCCHHHCCCEEEECCCCCCHHHHCCCEEEECCCCCEEHHHHHCCCCH INRIRFNGLTDNLIIESVSEVETIKHPNIIDGVKNRDLTLPFCRSIINRDLQGALEGWMP HCEEEECCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHCHHHHHHHHCCCC NGQHDPAAVELAQEALAGSINNALSFTYQLIEIIQDRVKYTKRHTGPAWPASRTLRERIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC SCRDLAMLMVEACRSIGIPSRFVSGYHFEDPLPSELDLHAWAELYIPGAGWRGFDPSGKG CHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCC LIDDRYLTLVSSSKSNLTSVITGNFIGKNNLENTLSWEIKPLEIK CCCCCEEEEEECCCCCCCHHEECCCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MRIKYIHKLEYKYEDPVQLGEHRLCIKPRSNGFQKLKNFELKITPEPEIIYPLLAASGEE CCCEEEEEECCCCCCCHHHCCCEEEECCCCCCHHHHCCCEEEECCCCCEEHHHHHCCCCH INRIRFNGLTDNLIIESVSEVETIKHPNIIDGVKNRDLTLPFCRSIINRDLQGALEGWMP HCEEEECCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHCHHHHHHHHCCCC NGQHDPAAVELAQEALAGSINNALSFTYQLIEIIQDRVKYTKRHTGPAWPASRTLRERIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC SCRDLAMLMVEACRSIGIPSRFVSGYHFEDPLPSELDLHAWAELYIPGAGWRGFDPSGKG CHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCC LIDDRYLTLVSSSKSNLTSVITGNFIGKNNLENTLSWEIKPLEIK CCCCCEEEEEECCCCCCCHHEECCCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA