Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126696412

Identifier: 126696412

GI number: 126696412

Start: 923821

End: 924225

Strand: Direct

Name: 126696412

Synonym: P9301_10741

Alternate gene names: NA

Gene position: 923821-924225 (Clockwise)

Preceding gene: 126696408

Following gene: 126696414

Centisome position: 56.27

GC content: 31.85

Gene sequence:

>405_bases
ATGGCTAGCCAAGATTATCTTATTGCAATAGCTTTAATTGAGCAAAACTTAGTAAGAGCAATGCCTCTTGGAGGTAAAGA
AATTAAAGATAATTTAGAGGAATCAGAAAATTTCAAGAAACTTGGAGAAGAGGTAATTTTAAATCTTCTAATGAGAGTTT
TTCAAAGAAGTGATGAGGGTGCTTTAAAAAGGGCTTCTGAAGAAAAAGGTTTGCTTCTTGTTCATATGCATCCTAAAAGA
ATGCAAAAAGAACTTCCATTCATTAAATCTGAATGGATAAGAGATGGAGATACACAACAGTTTCTAAAATACCTTGGAAA
TCTTTCAAAAGAAGTATGGACTGCATCTTTCATAAAATACAAAGGGATTGAATTTACTTCTATCTCGAAGAATGAGGAAA
TCTAA

Upstream 100 bases:

>100_bases
AATAAATTATTTCCTTTCTTCTTTTCGTAGATATTTAATTTATGTAAGATTTTCATGAACTCGAGAGGTTAGAATAACAA
AAAAAGTATTATTTCAGAAT

Downstream 100 bases:

>100_bases
AATATATTAAAAATATTTTCTTTTCAAAGAATTTCTTTCTTTACAATATTATTTTGCTTTGTAACTCTAAAGCAGTTTCT
ACCATTACCAAAATCAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MASQDYLIAIALIEQNLVRAMPLGGKEIKDNLEESENFKKLGEEVILNLLMRVFQRSDEGALKRASEEKGLLLVHMHPKR
MQKELPFIKSEWIRDGDTQQFLKYLGNLSKEVWTASFIKYKGIEFTSISKNEEI

Sequences:

>Translated_134_residues
MASQDYLIAIALIEQNLVRAMPLGGKEIKDNLEESENFKKLGEEVILNLLMRVFQRSDEGALKRASEEKGLLLVHMHPKR
MQKELPFIKSEWIRDGDTQQFLKYLGNLSKEVWTASFIKYKGIEFTSISKNEEI
>Mature_133_residues
ASQDYLIAIALIEQNLVRAMPLGGKEIKDNLEESENFKKLGEEVILNLLMRVFQRSDEGALKRASEEKGLLLVHMHPKRM
QKELPFIKSEWIRDGDTQQFLKYLGNLSKEVWTASFIKYKGIEFTSISKNEEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15516; Mature: 15385

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQDYLIAIALIEQNLVRAMPLGGKEIKDNLEESENFKKLGEEVILNLLMRVFQRSDEG
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ALKRASEEKGLLLVHMHPKRMQKELPFIKSEWIRDGDTQQFLKYLGNLSKEVWTASFIKY
HHHHCCCCCCEEEEEECHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KGIEFTSISKNEEI
CCCEEEECCCCCCC
>Mature Secondary Structure 
ASQDYLIAIALIEQNLVRAMPLGGKEIKDNLEESENFKKLGEEVILNLLMRVFQRSDEG
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ALKRASEEKGLLLVHMHPKRMQKELPFIKSEWIRDGDTQQFLKYLGNLSKEVWTASFIKY
HHHHCCCCCCEEEEEECHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KGIEFTSISKNEEI
CCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA