| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is metG [H]
Identifier: 126696331
GI number: 126696331
Start: 864960
End: 866504
Strand: Direct
Name: metG [H]
Synonym: P9301_09931
Alternate gene names: 126696331
Gene position: 864960-866504 (Clockwise)
Preceding gene: 126696330
Following gene: 126696332
Centisome position: 52.68
GC content: 29.97
Gene sequence:
>1545_bases ATGACTTTTGTCATTACTACACCTTTATACTATGTTAATGATAAACCTCATTTAGGGAGTGTATATACGACAATAATTTG TGACTCAATAGCTAGGTATAAAAGGCTTGCAGGTGAAGATGTTATTTTCATCACTGGTGTTGATGAACATGGTTTAAAAA TACAGAGAACAGCTAATGAAAAGGGTATTGAACCAAAATCACATTGTGATGAAATTTCAGAAGTTTTTAATAATAATTGG AAAGATTGGAATATATCCTTTGACAAATTTATAAGAACAAGCTCCAAAAATCATGAATTTGTTGTTAATGAATTTTATGA AAGAGTAAAAGCATCAGATGATATCTATATGGGAGTTCAAAAAGGTTGGTATTGTGTCGGTTGTGAAGAATTTAAAGATA ATCCAGAAAACTCATCAACATACAAGTGTCCAATACATCAAAAAAATCTAGAATGGAAAAATGAAGAGAATCTCTTTTTT AGGCTTTCAAAATATCAAAAAGAAATCGAGAGAATAATCAACGAACCTTCTTTTATAGAGCCAATAGAAAGAAAGAATGA AATTATAAATTTTGTTTCTAGAGGTTTAAAGGATTTTTCAATTTCAAGAACAAATGTTAAATGGGGAATTCCTGTCCCTG GTTACGATAACCATACCTTTTATGTGTGGTTTGATGCTTTACTTGGATATGTTAGTGCCATTAGTTCTGATGCGACAGAA CATTCATTAGAAAAATCAATTAATGGAGGATGGCCAGCTGATGTTCATTTAATTGGTAAGGATATTCTGAGATTCCATGC TGTATATTGGCCTGCAATGCTAATTTCTGCCAAAATGAAAGTTCCAAAAAAGGTTTTTGGGCACGGATTTCTTACAAGAG AGGGGCAAAAAATGGGTAAAAGCTTAGGAAATGTACTCGACCCTGATTTATTGCTTACAAAATATGGAAATGATCCTGTA AGGTGGTATCTCATTAAAGACATATCACTAGGAAATGATGGAGATTTTCAAGATAAAAGATTTGTTGACATTATTAATAA TGACTTAGCTAATACGATTGGTAATCTATTAAATAGAACATCATCTATGTCTAGAAAGTGGTTTAATAATAAAGTTCCAA ATAAGGAAAAAATTTTCAATGAAAAAAAATTAGAGAATTTTGCCAAAATTGCTGTCGAAAACTATATTTATAACTTTGAT AATTACAAATTAGATCTAGCAGCTAATGAAGTACTTAGCCTAGCAATTAATACAAATTTGTATTTGAATGATAATCAGCC ATGGCTGTTAATAAAAGAGAAAGATAATCTACCTTTAGTTAAAGAAATTATCTATAACGTTTTAGAAAGTACACGAATAA TAGGATTATTATTAATACCTTTATTGCCCGAATTATCTACAAAAATTAATGACCAACTTGGTTCTATATACAGAGAAGAA ATTCCATGGAAAAAACAATTAATTTGGGGATTATTAGTTAGTAACTCAAGTCTTCCTAAACCCACTCCAATCATAAATAA ATTGGAGTATGAAGAACATTTATAG
Upstream 100 bases:
>100_bases ATGATAGTAATCTTTTAGAATTTATTTATTAATAGGATAATAAATACAATAGGTTGTTATTAGTTTAAAAAATATCTGTT AGTATTAATAAAAAAGCTTT
Downstream 100 bases:
>100_bases ATTAATAATATTCCTTCCATTATTTATGCTTGGTTGCACCCCAAATGTAATTGATGAAAATAAAGTTATACAAAAAATTG ACAGTTTAGATATGACTATT
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MTFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVIFITGVDEHGLKIQRTANEKGIEPKSHCDEISEVFNNNW KDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQKGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFF RLSKYQKEIERIINEPSFIEPIERKNEIINFVSRGLKDFSISRTNVKWGIPVPGYDNHTFYVWFDALLGYVSAISSDATE HSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKMGKSLGNVLDPDLLLTKYGNDPV RWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLNRTSSMSRKWFNNKVPNKEKIFNEKKLENFAKIAVENYIYNFD NYKLDLAANEVLSLAINTNLYLNDNQPWLLIKEKDNLPLVKEIIYNVLESTRIIGLLLIPLLPELSTKINDQLGSIYREE IPWKKQLIWGLLVSNSSLPKPTPIINKLEYEEHL
Sequences:
>Translated_514_residues MTFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVIFITGVDEHGLKIQRTANEKGIEPKSHCDEISEVFNNNW KDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQKGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFF RLSKYQKEIERIINEPSFIEPIERKNEIINFVSRGLKDFSISRTNVKWGIPVPGYDNHTFYVWFDALLGYVSAISSDATE HSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKMGKSLGNVLDPDLLLTKYGNDPV RWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLNRTSSMSRKWFNNKVPNKEKIFNEKKLENFAKIAVENYIYNFD NYKLDLAANEVLSLAINTNLYLNDNQPWLLIKEKDNLPLVKEIIYNVLESTRIIGLLLIPLLPELSTKINDQLGSIYREE IPWKKQLIWGLLVSNSSLPKPTPIINKLEYEEHL >Mature_513_residues TFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVIFITGVDEHGLKIQRTANEKGIEPKSHCDEISEVFNNNWK DWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQKGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFFR LSKYQKEIERIINEPSFIEPIERKNEIINFVSRGLKDFSISRTNVKWGIPVPGYDNHTFYVWFDALLGYVSAISSDATEH SLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKMGKSLGNVLDPDLLLTKYGNDPVR WYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLNRTSSMSRKWFNNKVPNKEKIFNEKKLENFAKIAVENYIYNFDN YKLDLAANEVLSLAINTNLYLNDNQPWLLIKEKDNLPLVKEIIYNVLESTRIIGLLLIPLLPELSTKINDQLGSIYREEI PWKKQLIWGLLVSNSSLPKPTPIINKLEYEEHL
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2A subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=500, Percent_Identity=34.2, Blast_Score=311, Evalue=1e-84, Organism=Homo sapiens, GI14043022, Length=520, Percent_Identity=25.7692307692308, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI1788432, Length=499, Percent_Identity=26.0521042084168, Blast_Score=182, Evalue=5e-47, Organism=Caenorhabditis elegans, GI212645096, Length=511, Percent_Identity=30.9197651663405, Blast_Score=231, Evalue=9e-61, Organism=Caenorhabditis elegans, GI71992781, Length=351, Percent_Identity=30.4843304843305, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17540794, Length=554, Percent_Identity=25.4512635379061, Blast_Score=149, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6321610, Length=520, Percent_Identity=33.6538461538462, Blast_Score=258, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6321704, Length=517, Percent_Identity=24.1779497098646, Blast_Score=127, Evalue=4e-30, Organism=Drosophila melanogaster, GI21358483, Length=489, Percent_Identity=31.0838445807771, Blast_Score=278, Evalue=6e-75, Organism=Drosophila melanogaster, GI24655311, Length=547, Percent_Identity=27.0566727605119, Blast_Score=177, Evalue=1e-44,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 59570; Mature: 59439
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVIFITGVDEHGLKIQRTANE CEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCC KGIEPKSHCDEISEVFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQ CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEC KGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFFRLSKYQKEIERIINEPSFIE CCEEEEECHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCC PIERKNEIINFVSRGLKDFSISRTNVKWGIPVPGYDNHTFYVWFDALLGYVSAISSDATE HHHHHHHHHHHHHCCCHHCEEECCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHCCHHH HSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKMGK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHH SLGNVLDPDLLLTKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLNRT HHHHHCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SSMSRKWFNNKVPNKEKIFNEKKLENFAKIAVENYIYNFDNYKLDLAANEVLSLAINTNL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCEEEEEEECEE YLNDNQPWLLIKEKDNLPLVKEIIYNVLESTRIIGLLLIPLLPELSTKINDQLGSIYREE EECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPWKKQLIWGLLVSNSSLPKPTPIINKLEYEEHL CCHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHCC >Mature Secondary Structure TFVITTPLYYVNDKPHLGSVYTTIICDSIARYKRLAGEDVIFITGVDEHGLKIQRTANE EEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCC KGIEPKSHCDEISEVFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQ CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEC KGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFFRLSKYQKEIERIINEPSFIE CCEEEEECHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCC PIERKNEIINFVSRGLKDFSISRTNVKWGIPVPGYDNHTFYVWFDALLGYVSAISSDATE HHHHHHHHHHHHHCCCHHCEEECCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHCCHHH HSLEKSINGGWPADVHLIGKDILRFHAVYWPAMLISAKMKVPKKVFGHGFLTREGQKMGK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHH SLGNVLDPDLLLTKYGNDPVRWYLIKDISLGNDGDFQDKRFVDIINNDLANTIGNLLNRT HHHHHCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SSMSRKWFNNKVPNKEKIFNEKKLENFAKIAVENYIYNFDNYKLDLAANEVLSLAINTNL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCEEEEEEECEE YLNDNQPWLLIKEKDNLPLVKEIIYNVLESTRIIGLLLIPLLPELSTKINDQLGSIYREE EECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPWKKQLIWGLLVSNSSLPKPTPIINKLEYEEHL CCHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]