| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696325
Identifier: 126696325
GI number: 126696325
Start: 858898
End: 859908
Strand: Direct
Name: 126696325
Synonym: P9301_09871
Alternate gene names: NA
Gene position: 858898-859908 (Clockwise)
Preceding gene: 126696323
Following gene: 126696328
Centisome position: 52.31
GC content: 29.97
Gene sequence:
>1011_bases TTGAATAGTCCTGAAAATTCAAATACAAAAAGAATTTCAATTGATTTACCTGAGGAACTAATTTCCAGGTTTGATCAATT ACGAAAAGAGTGGGGATTTAGAGCAAGAGGACCTGTAATAGAAAAGATACTTAAAGAACTTCTTCAAGAAGATGATTTAC TACCTAAAAACCAACAGCAAGAAATAGACTTTAACGATAAGAATACTAATGAAAATTTAAATATTGATGAAGATACTGCA TTGGTATTAATTAAATCAGACGTAAAAAAAGAAATTAATGAGATATCTTTAAATAAAAGATCTACAAATAACAATCAATA TAAAGAAACAGCCAACTCAAATATAAGCCTTCCCAATTTCGTTGAAAAAAAAGTAAAGAATCTAAGAAGAAGTATTAATA GTGAAAAATTAAAGGAGAATATTAATGATATTCAAATTAATACAATCAAAGAAACTGAATTAATAAAATGTCGAATTGAG TTAATTAGTCATTGGGAAACACTATATGGATCAGTTCCTAATGACCATGTAGTAGAAGCTTCATTGGATTGGTTTGAAAG GGATATATGGCCAAATCTTGATGGGACTGAAAATCTACCCTTTACTTGGAGTGCAGCCAATAAATTAATGTCAGAATTAT GCCCATTTTGGATAAAGAAAAATCCATCACTTGAAATTGTTTTATTAATGATTGGCGTTTTAGAAGACCCTTTTGCAACA TCAGATCTGATAAATAGAATACCAACACTTATGAGAAGGTTTGTAAGTAGATTTAAGCGAAATAATAGATCAAATTCATT TGAAACTTTGGACTCAACAATGACAGTACATGGAGCACTTAAATTATTGAATTTATCAACATCAGCAGGATCAGCTCATA CATTCCGTAAAATTAGGGAGGCCTATAAATCAATAGCCTTAGAGACACATCCAGATGCTGGAGGATCAACAGATCAAATG AGAAAATTAAATGAAGCGTATCAATTGTTAAAAAATCTATATAGAGACTAG
Upstream 100 bases:
>100_bases AAAAATAAATTGGTTTTAATTTAAAAACAATATTCCTTGTGGACTTTCAATATATTTTGAATAAAATTAAATAAATTCCA TACTCTTCAAGAAAATATTA
Downstream 100 bases:
>100_bases TATAGTAATTCCCATATAAGACTAATTACAAGTCTAATTAATAGTCTCATATAAGAGAGCTGTTAAGCAAAAAATTTCTT ATTTTAATCAATTATTTTTA
Product: DnaJ domain-containing protein
Products: NA
Alternate protein names: Chaperone; Heat Shock Protein DNAJ N-Terminal Domain Protein; Chaperone Containing DNAj Domain; Cyanobacteria-Specific Chaperone Containing DNAj Domain; DNAJ Domain
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MNSPENSNTKRISIDLPEELISRFDQLRKEWGFRARGPVIEKILKELLQEDDLLPKNQQQEIDFNDKNTNENLNIDEDTA LVLIKSDVKKEINEISLNKRSTNNNQYKETANSNISLPNFVEKKVKNLRRSINSEKLKENINDIQINTIKETELIKCRIE LISHWETLYGSVPNDHVVEASLDWFERDIWPNLDGTENLPFTWSAANKLMSELCPFWIKKNPSLEIVLLMIGVLEDPFAT SDLINRIPTLMRRFVSRFKRNNRSNSFETLDSTMTVHGALKLLNLSTSAGSAHTFRKIREAYKSIALETHPDAGGSTDQM RKLNEAYQLLKNLYRD
Sequences:
>Translated_336_residues MNSPENSNTKRISIDLPEELISRFDQLRKEWGFRARGPVIEKILKELLQEDDLLPKNQQQEIDFNDKNTNENLNIDEDTA LVLIKSDVKKEINEISLNKRSTNNNQYKETANSNISLPNFVEKKVKNLRRSINSEKLKENINDIQINTIKETELIKCRIE LISHWETLYGSVPNDHVVEASLDWFERDIWPNLDGTENLPFTWSAANKLMSELCPFWIKKNPSLEIVLLMIGVLEDPFAT SDLINRIPTLMRRFVSRFKRNNRSNSFETLDSTMTVHGALKLLNLSTSAGSAHTFRKIREAYKSIALETHPDAGGSTDQM RKLNEAYQLLKNLYRD >Mature_336_residues MNSPENSNTKRISIDLPEELISRFDQLRKEWGFRARGPVIEKILKELLQEDDLLPKNQQQEIDFNDKNTNENLNIDEDTA LVLIKSDVKKEINEISLNKRSTNNNQYKETANSNISLPNFVEKKVKNLRRSINSEKLKENINDIQINTIKETELIKCRIE LISHWETLYGSVPNDHVVEASLDWFERDIWPNLDGTENLPFTWSAANKLMSELCPFWIKKNPSLEIVLLMIGVLEDPFAT SDLINRIPTLMRRFVSRFKRNNRSNSFETLDSTMTVHGALKLLNLSTSAGSAHTFRKIREAYKSIALETHPDAGGSTDQM RKLNEAYQLLKNLYRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38891; Mature: 38891
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPENSNTKRISIDLPEELISRFDQLRKEWGFRARGPVIEKILKELLQEDDLLPKNQQQ CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC EIDFNDKNTNENLNIDEDTALVLIKSDVKKEINEISLNKRSTNNNQYKETANSNISLPNF CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHH VEKKVKNLRRSINSEKLKENINDIQINTIKETELIKCRIELISHWETLYGSVPNDHVVEA HHHHHHHHHHHCCHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH SLDWFERDIWPNLDGTENLPFTWSAANKLMSELCPFWIKKNPSLEIVLLMIGVLEDPFAT HHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCH SDLINRIPTLMRRFVSRFKRNNRSNSFETLDSTMTVHGALKLLNLSTSAGSAHTFRKIRE HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH AYKSIALETHPDAGGSTDQMRKLNEAYQLLKNLYRD HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSPENSNTKRISIDLPEELISRFDQLRKEWGFRARGPVIEKILKELLQEDDLLPKNQQQ CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC EIDFNDKNTNENLNIDEDTALVLIKSDVKKEINEISLNKRSTNNNQYKETANSNISLPNF CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHH VEKKVKNLRRSINSEKLKENINDIQINTIKETELIKCRIELISHWETLYGSVPNDHVVEA HHHHHHHHHHHCCHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH SLDWFERDIWPNLDGTENLPFTWSAANKLMSELCPFWIKKNPSLEIVLLMIGVLEDPFAT HHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCH SDLINRIPTLMRRFVSRFKRNNRSNSFETLDSTMTVHGALKLLNLSTSAGSAHTFRKIRE HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH AYKSIALETHPDAGGSTDQMRKLNEAYQLLKNLYRD HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA