| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696247
Identifier: 126696247
GI number: 126696247
Start: 781086
End: 781484
Strand: Direct
Name: 126696247
Synonym: P9301_09091
Alternate gene names: NA
Gene position: 781086-781484 (Clockwise)
Preceding gene: 126696245
Following gene: 126696248
Centisome position: 47.57
GC content: 30.08
Gene sequence:
>399_bases TTGAATTATTGGATTCAAAACTTAATTCCATATGGATCTCCCGAGGATATAGGTGTTATTCAACTTGCTTGGCTTGGAGA TTCGGTATGGGAGCTTCACCAAAGATTAAGACATGTACATTTCCCTTTGAAATCAAAAGATCTACATTTATCTGTAGTAA ACGAAGTAAAAGCAAAATCTCAGTCAAAATCATTAAGTCAAATTGAACATTTATTAAATACAAATGAAATTGATCTAATT AGACGTGCTAGAAATAAAATAAAGAGATATCCAAAGTCTTCAGACCCTACTATATACTCAAGAGCAACTGGTTTTGAAAC TCTTATTGGCTGGCTATTTTTAAAAGATCCTCAAAGATTATCAACAATTTTTGAATATTTAGAATTAAAAATGAATTGA
Upstream 100 bases:
>100_bases TTGGTAATTCGAGAGTGGCCCAAACAATTAAACTTGTTCGTTTAGGCGATTTTCTTAACTTGAAGTCAAGCCTTGAAGAT GCATTAAATTATTTAAAAAA
Downstream 100 bases:
>100_bases ATCTATGAAAAACTCCTCAAATAAATTTCGCGGAAGAAATATTAAAGAGTACAAAAAAAATTCAGATTTTAGCTATTACT CAAAAAATACAAATCGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: URF4 [H]
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MNYWIQNLIPYGSPEDIGVIQLAWLGDSVWELHQRLRHVHFPLKSKDLHLSVVNEVKAKSQSKSLSQIEHLLNTNEIDLI RRARNKIKRYPKSSDPTIYSRATGFETLIGWLFLKDPQRLSTIFEYLELKMN
Sequences:
>Translated_132_residues MNYWIQNLIPYGSPEDIGVIQLAWLGDSVWELHQRLRHVHFPLKSKDLHLSVVNEVKAKSQSKSLSQIEHLLNTNEIDLI RRARNKIKRYPKSSDPTIYSRATGFETLIGWLFLKDPQRLSTIFEYLELKMN >Mature_132_residues MNYWIQNLIPYGSPEDIGVIQLAWLGDSVWELHQRLRHVHFPLKSKDLHLSVVNEVKAKSQSKSLSQIEHLLNTNEIDLI RRARNKIKRYPKSSDPTIYSRATGFETLIGWLFLKDPQRLSTIFEYLELKMN
Specific function: Unknown
COG id: COG1939
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000999 - InterPro: IPR008226 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15517; Mature: 15517
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYWIQNLIPYGSPEDIGVIQLAWLGDSVWELHQRLRHVHFPLKSKDLHLSVVNEVKAKS CCCCHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH QSKSLSQIEHLLNTNEIDLIRRARNKIKRYPKSSDPTIYSRATGFETLIGWLFLKDPQRL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHCCHHHHHHHHHCCCHHHH STIFEYLELKMN HHHHHHHHHHCC >Mature Secondary Structure MNYWIQNLIPYGSPEDIGVIQLAWLGDSVWELHQRLRHVHFPLKSKDLHLSVVNEVKAKS CCCCHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH QSKSLSQIEHLLNTNEIDLIRRARNKIKRYPKSSDPTIYSRATGFETLIGWLFLKDPQRL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHCCHHHHHHHHHCCCHHHH STIFEYLELKMN HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8363578 [H]