| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696198
Identifier: 126696198
GI number: 126696198
Start: 746596
End: 747207
Strand: Direct
Name: 126696198
Synonym: P9301_08601
Alternate gene names: NA
Gene position: 746596-747207 (Clockwise)
Preceding gene: 126696196
Following gene: 126696202
Centisome position: 45.47
GC content: 30.56
Gene sequence:
>612_bases ATGCAGCCTCATAGCCTAAAGCTATCTCCAGAATCTGATTTGATAAATTCAATTAAAGAATATTCTTTATCGAATAATTT ATACGGGTATGTTTCTGGAGTGGTTGGTAATCTTAGAACAGTTTGTATTCAATGCCCAGGTAATCAAGTGATAAATAAAT TTGAAGGAAATCTAGAGATAGTTTCTTTAAACGGGCATTTTCATAAAGGAGATGTTCATTTACATTTGAGTTTTGCAGAT GAGGGATGTAATGTGTTTGGCGGGCATCTTGAGGAGGGATGTATTGTAAAAAAAGGTACTGATATATTATTACTTTCCTT TGAGCAGAAAATTATTAATATCTCAAATCATGATTTAATCACTAATGAATCACGTGTAAAAGCATATATTTTAAAGGATT GTCCTTGGTCTAAAAGAGCAATTAGGCTGCTTAATTCTTTATCTATCCCTCATGAAGTTACTTTAATAGACAATGATGAG AGCTTTCAAAAAATAATGGCTCAAAGTAGCCATAATACTTTTCCTCAAATATTTTTAGATAATAAATTTTTTGGAGGATA TGATGCACTTTCTGAACAAGCAAAATTGGATAACTTAATTTCATTTAAGTAA
Upstream 100 bases:
>100_bases ATTTTAAAATCTAATTTAAATCTGAATCCTAAATTTTATAAACTCAACTTCTTTTTATGATTGATGATGTTTTATATTAA AAAATTATTCGTTATATCTA
Downstream 100 bases:
>100_bases TCTAATTTTTTTAACTATCACGATTAGTAAGCTTTTCAGCAACTAATTCGTCCTCTAGCTGCTTTATTAATCTTGATACA AGACTTTGAAATTCTGGTTG
Product: glutaredoxin
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MQPHSLKLSPESDLINSIKEYSLSNNLYGYVSGVVGNLRTVCIQCPGNQVINKFEGNLEIVSLNGHFHKGDVHLHLSFAD EGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINISNHDLITNESRVKAYILKDCPWSKRAIRLLNSLSIPHEVTLIDNDE SFQKIMAQSSHNTFPQIFLDNKFFGGYDALSEQAKLDNLISFK
Sequences:
>Translated_203_residues MQPHSLKLSPESDLINSIKEYSLSNNLYGYVSGVVGNLRTVCIQCPGNQVINKFEGNLEIVSLNGHFHKGDVHLHLSFAD EGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINISNHDLITNESRVKAYILKDCPWSKRAIRLLNSLSIPHEVTLIDNDE SFQKIMAQSSHNTFPQIFLDNKFFGGYDALSEQAKLDNLISFK >Mature_203_residues MQPHSLKLSPESDLINSIKEYSLSNNLYGYVSGVVGNLRTVCIQCPGNQVINKFEGNLEIVSLNGHFHKGDVHLHLSFAD EGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINISNHDLITNESRVKAYILKDCPWSKRAIRLLNSLSIPHEVTLIDNDE SFQKIMAQSSHNTFPQIFLDNKFFGGYDALSEQAKLDNLISFK
Specific function: Unknown
COG id: COG1661
COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22749; Mature: 22749
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPHSLKLSPESDLINSIKEYSLSNNLYGYVSGVVGNLRTVCIQCPGNQVINKFEGNLEI CCCCCEEECCHHHHHHHHHHHHCCCCCCEEHHHHHCCCEEEEEECCCHHHHHHCCCCEEE VSLNGHFHKGDVHLHLSFADEGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINISNHDLI EEECCEEEECEEEEEEEECCCCCCEECCCCCCCEEEECCCCEEEEEECCEEEECCCCCEE TNESRVKAYILKDCPWSKRAIRLLNSLSIPHEVTLIDNDESFQKIMAQSSHNTFPQIFLD CCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCEEEEC NKFFGGYDALSEQAKLDNLISFK CCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQPHSLKLSPESDLINSIKEYSLSNNLYGYVSGVVGNLRTVCIQCPGNQVINKFEGNLEI CCCCCEEECCHHHHHHHHHHHHCCCCCCEEHHHHHCCCEEEEEECCCHHHHHHCCCCEEE VSLNGHFHKGDVHLHLSFADEGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINISNHDLI EEECCEEEECEEEEEEEECCCCCCEECCCCCCCEEEECCCCEEEEEECCEEEECCCCCEE TNESRVKAYILKDCPWSKRAIRLLNSLSIPHEVTLIDNDESFQKIMAQSSHNTFPQIFLD CCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCEEEEC NKFFGGYDALSEQAKLDNLISFK CCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA