| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is pstS [H]
Identifier: 126696112
GI number: 126696112
Start: 672109
End: 673080
Strand: Direct
Name: pstS [H]
Synonym: P9301_07741
Alternate gene names: 126696112
Gene position: 672109-673080 (Clockwise)
Preceding gene: 126696111
Following gene: 126696113
Centisome position: 40.94
GC content: 38.17
Gene sequence:
>972_bases GTGGGCATTTTCAAAAAAGTCCTTATTTTATCTTCTGCTATCTCATTAGTTCTCTCTCAAGAAGCGATTGCTTCAAAAAG ATTGAGCGGAGCAGGTGCTACATTTCCCTCGAAAATTTATACTAGGTGGTTTTTTGACTTAGCCAAATCTGGTGGACCAA GGGTTAATTACCAAGCAGTTGGTTCGGGCTCTGGAAGAAAAGCTTTTATAGACCAAACTGTAAACTTTGGTGCATCAGAT GATCCTATGAAAGATTCTGATATAGAGAAAGTAACTAGAGGACTAGTTCAAATACCTATGGTTGGTGGAACTATTGCTTT TGGTTATAACTATGATTGCGATTTGAAACTTACACAAGAGCAAGCAGTACGAGTTGCAATGGGTATGGTTAAAAACTGGA AAGAATTAGGTTGTAAATCAGGAAAGTTAACTTGGACCCATCGTTCTGATGGTTCAGGAACTACTAAGGCTTTCACAAAT TCTATGGAAGCATTTTCACCAACATGGACTTTAGGAACTGGTAAATCAGTAAAGTGGCCAGCAGGCGTTGGAGCAAAAGG TAATGCCGGTGTTGCAGGTGTAATTCAAAACACTCCAGGCGCAATTGGTTATGTAAATCAGTCATATATTAAAGGTAATG TTAAGGCTGCTGCGATTCAAAATCTTTCAGGTGAGTTTCTAAAACCATCTGCAGAGGCAGGAGCTAAGGCTCTTAATGGT ATTACTTTAGATGAAAATCTTGCGGGTAAAAATCCTAATCCAACAGCAAAAGGCGCGTACCCTATCGCTTCATTGACATG GATACTTGCTTACGAAAAAGGTAATGGTAGAAACACTAAAGCAATAAAACAAGCCTTTAATACATTATTAAGTGATGAGT ATCAAGATAAGGCTTCATCCCTTGGATTTATTCCCTTAAAAGGGAATATCCTTTTAAAATCAAGAGCTGCCGTTGAAAAA ATAGGTAGTTAA
Upstream 100 bases:
>100_bases ATTATTATTTATATCAAAATAATTTGATTAATAAATCTTGAAATTTTTAAATTAACTTTTGGCTGTAATTTATATTTGAC ATTATTATTACTCATTAAAA
Downstream 100 bases:
>100_bases ATTTTTTAATAGATGTCAAATTATCATGACTTTCATATACCTTTAAGTCCTCTTAAAGTCTTTTACAGCATTTAGTAGTA GATTTATAGAGATATTCTTT
Product: ABC transporter, substrate binding protein, phosphate
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MGIFKKVLILSSAISLVLSQEAIASKRLSGAGATFPSKIYTRWFFDLAKSGGPRVNYQAVGSGSGRKAFIDQTVNFGASD DPMKDSDIEKVTRGLVQIPMVGGTIAFGYNYDCDLKLTQEQAVRVAMGMVKNWKELGCKSGKLTWTHRSDGSGTTKAFTN SMEAFSPTWTLGTGKSVKWPAGVGAKGNAGVAGVIQNTPGAIGYVNQSYIKGNVKAAAIQNLSGEFLKPSAEAGAKALNG ITLDENLAGKNPNPTAKGAYPIASLTWILAYEKGNGRNTKAIKQAFNTLLSDEYQDKASSLGFIPLKGNILLKSRAAVEK IGS
Sequences:
>Translated_323_residues MGIFKKVLILSSAISLVLSQEAIASKRLSGAGATFPSKIYTRWFFDLAKSGGPRVNYQAVGSGSGRKAFIDQTVNFGASD DPMKDSDIEKVTRGLVQIPMVGGTIAFGYNYDCDLKLTQEQAVRVAMGMVKNWKELGCKSGKLTWTHRSDGSGTTKAFTN SMEAFSPTWTLGTGKSVKWPAGVGAKGNAGVAGVIQNTPGAIGYVNQSYIKGNVKAAAIQNLSGEFLKPSAEAGAKALNG ITLDENLAGKNPNPTAKGAYPIASLTWILAYEKGNGRNTKAIKQAFNTLLSDEYQDKASSLGFIPLKGNILLKSRAAVEK IGS >Mature_322_residues GIFKKVLILSSAISLVLSQEAIASKRLSGAGATFPSKIYTRWFFDLAKSGGPRVNYQAVGSGSGRKAFIDQTVNFGASDD PMKDSDIEKVTRGLVQIPMVGGTIAFGYNYDCDLKLTQEQAVRVAMGMVKNWKELGCKSGKLTWTHRSDGSGTTKAFTNS MEAFSPTWTLGTGKSVKWPAGVGAKGNAGVAGVIQNTPGAIGYVNQSYIKGNVKAAAIQNLSGEFLKPSAEAGAKALNGI TLDENLAGKNPNPTAKGAYPIASLTWILAYEKGNGRNTKAIKQAFNTLLSDEYQDKASSLGFIPLKGNILLKSRAAVEKI GS
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=313, Percent_Identity=33.2268370607029, Blast_Score=150, Evalue=9e-38,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 34158; Mature: 34027
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFKKVLILSSAISLVLSQEAIASKRLSGAGATFPSKIYTRWFFDLAKSGGPRVNYQAV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEE GSGSGRKAFIDQTVNFGASDDPMKDSDIEKVTRGLVQIPMVGGTIAFGYNYDCDLKLTQE CCCCCCEEEEHHHHCCCCCCCCCCCCHHHHHHHHHEEECEECCEEEECCCCCCCEEECHH QAVRVAMGMVKNWKELGCKSGKLTWTHRSDGSGTTKAFTNSMEAFSPTWTLGTGKSVKWP HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCHHHCCCEEECCCCCCEECC AGVGAKGNAGVAGVIQNTPGAIGYVNQSYIKGNVKAAAIQNLSGEFLKPSAEAGAKALNG CCCCCCCCCCEEEEEECCCCCEEECCHHHHCCCCCEEHHHCCCCCCCCCCHHHHHHHHCC ITLDENLAGKNPNPTAKGAYPIASLTWILAYEKGNGRNTKAIKQAFNTLLSDEYQDKASS CEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC LGFIPLKGNILLKSRAAVEKIGS CCEEEECCCEEEECHHHHHHHCC >Mature Secondary Structure GIFKKVLILSSAISLVLSQEAIASKRLSGAGATFPSKIYTRWFFDLAKSGGPRVNYQAV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEE GSGSGRKAFIDQTVNFGASDDPMKDSDIEKVTRGLVQIPMVGGTIAFGYNYDCDLKLTQE CCCCCCEEEEHHHHCCCCCCCCCCCCHHHHHHHHHEEECEECCEEEECCCCCCCEEECHH QAVRVAMGMVKNWKELGCKSGKLTWTHRSDGSGTTKAFTNSMEAFSPTWTLGTGKSVKWP HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCHHHCCCEEECCCCCCEECC AGVGAKGNAGVAGVIQNTPGAIGYVNQSYIKGNVKAAAIQNLSGEFLKPSAEAGAKALNG CCCCCCCCCCEEEEEECCCCCEEECCHHHHCCCCCEEHHHCCCCCCCCCCHHHHHHHHCC ITLDENLAGKNPNPTAKGAYPIASLTWILAYEKGNGRNTKAIKQAFNTLLSDEYQDKASS CEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC LGFIPLKGNILLKSRAAVEKIGS CCEEEECCCEEEECHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]