| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696005
Identifier: 126696005
GI number: 126696005
Start: 592859
End: 594406
Strand: Direct
Name: 126696005
Synonym: P9301_06671
Alternate gene names: NA
Gene position: 592859-594406 (Clockwise)
Preceding gene: 126696002
Following gene: 126696006
Centisome position: 36.11
GC content: 27.84
Gene sequence:
>1548_bases ATGGGTAAGAAATTAAAAAATTATCAAGAGTTTCCAAAAATGAAGAATAATTTCGTAGAAAACATCAAAGATGAAAAATA TTTTTATTCATTGATTGAAGATGTAGAGAATAGCAAAGTTGGATTTTACAGTGTTGGTTTATATCCTGCATCACTAGCAT ACAACTGTGCTATGCATGGAAAATCAAATAATATTCTCTTGGCTCCTAGGGAAGATAGAGATTTGTTAGGTGCTTTCTCG AAAGATGTTATTTCTGGTATGGATAATGAGATTATTGAAAAGATTAAGAGAATGGGAAATTATTCTTCAGAGGGAAAAAT AAAGTCTTTTGATCTAAATGATCTTCTATTGAAATGTGAGATAGTTATTCTTGCTTCAAATAGTAATCACATACAAGATG ATGTTAAAAATGCTTTAGAACTCAGAAAAAATTTAAAAAGGGAAAATGTGGTCCTTGGCTGTCTAGTCGGTTCTTTTTGT ATTGATAATAAAAATAAAAACCCTTTTATTCTTTGTAATAAATATCCAAATTTAGCTTTTTTTACAGGGTTTCATCGTCA CGGAGCTTTAAGAAATCCTAATGATAGTTTTACTGCAAATTTCTGCCATCCTAATGCGCTAACAGCATTAATAGGCGCAC GCATTTTGAATCAATTATCACCGAAAATTCAAGTTTCTCCTGGTGTTCACAATATTGAATGTCAATATATAAAATCAATA AAAAATATCTCATCAATTTTTGCAGGTTTTGTAAATAACTTTCATTCCGATAAGCCAGGAATGCTTCCTACCATTAATAC GATTTTGTTAACTCAATGTTTAGACCAGGCCGCATCAGTATCAATAAAAGTTAGAAAAAAAAATAAATTAGAGAATAAAT ATCTTTCATTAAAAGAACTTGGTTATGGTGAAGAAATAATTAGTGCAAGGGAAATAAATAATGAAAAATTTTGTGAAAAA GGAGATTATACTTTTTCTCAATTAAATGCTGTTAAGGCTGATGTCTTAGGAAGTATGACTCTACCAACTGAAGGAAAACC AACACGGAATTTTCAAGCAGGACAAGTTTTATCAGATATGCTTTTGCAACTCAACAGATGTCCAAAAGATGTCTCAGAAT TTGTAAATTGGTGTAATAAATACTCTCTCAGTCAAGGAGGATTAGAAGGTCTAAAATCTTTAAAATTTTGGCCAGACATT TATAAAGAATTCAAAATTAAAAATAACAATTGTTCAATGATTAATCTGATTTATTTATGCTTTAATGCTAATTCAGAAGA AAAAAAAGAAATTTATAAGGTTTTAATTAGTTCAGAAGAAATAACTAATTTTTGCCAAGAATCTGTGAAATCAGAATTAT CTTTCGAACTAAATGAAAAATTAAAAGGAGATTATCTTTTTGATGATATTGAAAACTTTTATAAGAAATTATTTACTAAC AAAGAGCAAAACGCCCTTAAAACAAATAAATATAGTAATCAAATTTCTAAAAAAAATCCTAGTTATATCAATGTATTGAA AATTATTAATAAATATTTTAATAATTGA
Upstream 100 bases:
>100_bases CTTTTAATTTTCACTCATAAATTATAAATTAAAAAACTGAATTTTTTCAATAAATAATTTGCTATGGTCAAAAATTGCTT TAATGTAGAAAAATATTGGT
Downstream 100 bases:
>100_bases TTATTTTTATAATTTGCTAGAAAGTAAAGTTCTTAATTTATTTACTAATCTTGATTGCAGGGTTAGAATTACTATGGTTT AAAAAGGTTTTTTTTGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MGKKLKNYQEFPKMKNNFVENIKDEKYFYSLIEDVENSKVGFYSVGLYPASLAYNCAMHGKSNNILLAPREDRDLLGAFS KDVISGMDNEIIEKIKRMGNYSSEGKIKSFDLNDLLLKCEIVILASNSNHIQDDVKNALELRKNLKRENVVLGCLVGSFC IDNKNKNPFILCNKYPNLAFFTGFHRHGALRNPNDSFTANFCHPNALTALIGARILNQLSPKIQVSPGVHNIECQYIKSI KNISSIFAGFVNNFHSDKPGMLPTINTILLTQCLDQAASVSIKVRKKNKLENKYLSLKELGYGEEIISAREINNEKFCEK GDYTFSQLNAVKADVLGSMTLPTEGKPTRNFQAGQVLSDMLLQLNRCPKDVSEFVNWCNKYSLSQGGLEGLKSLKFWPDI YKEFKIKNNNCSMINLIYLCFNANSEEKKEIYKVLISSEEITNFCQESVKSELSFELNEKLKGDYLFDDIENFYKKLFTN KEQNALKTNKYSNQISKKNPSYINVLKIINKYFNN
Sequences:
>Translated_515_residues MGKKLKNYQEFPKMKNNFVENIKDEKYFYSLIEDVENSKVGFYSVGLYPASLAYNCAMHGKSNNILLAPREDRDLLGAFS KDVISGMDNEIIEKIKRMGNYSSEGKIKSFDLNDLLLKCEIVILASNSNHIQDDVKNALELRKNLKRENVVLGCLVGSFC IDNKNKNPFILCNKYPNLAFFTGFHRHGALRNPNDSFTANFCHPNALTALIGARILNQLSPKIQVSPGVHNIECQYIKSI KNISSIFAGFVNNFHSDKPGMLPTINTILLTQCLDQAASVSIKVRKKNKLENKYLSLKELGYGEEIISAREINNEKFCEK GDYTFSQLNAVKADVLGSMTLPTEGKPTRNFQAGQVLSDMLLQLNRCPKDVSEFVNWCNKYSLSQGGLEGLKSLKFWPDI YKEFKIKNNNCSMINLIYLCFNANSEEKKEIYKVLISSEEITNFCQESVKSELSFELNEKLKGDYLFDDIENFYKKLFTN KEQNALKTNKYSNQISKKNPSYINVLKIINKYFNN >Mature_514_residues GKKLKNYQEFPKMKNNFVENIKDEKYFYSLIEDVENSKVGFYSVGLYPASLAYNCAMHGKSNNILLAPREDRDLLGAFSK DVISGMDNEIIEKIKRMGNYSSEGKIKSFDLNDLLLKCEIVILASNSNHIQDDVKNALELRKNLKRENVVLGCLVGSFCI DNKNKNPFILCNKYPNLAFFTGFHRHGALRNPNDSFTANFCHPNALTALIGARILNQLSPKIQVSPGVHNIECQYIKSIK NISSIFAGFVNNFHSDKPGMLPTINTILLTQCLDQAASVSIKVRKKNKLENKYLSLKELGYGEEIISAREINNEKFCEKG DYTFSQLNAVKADVLGSMTLPTEGKPTRNFQAGQVLSDMLLQLNRCPKDVSEFVNWCNKYSLSQGGLEGLKSLKFWPDIY KEFKIKNNNCSMINLIYLCFNANSEEKKEIYKVLISSEEITNFCQESVKSELSFELNEKLKGDYLFDDIENFYKKLFTNK EQNALKTNKYSNQISKKNPSYINVLKIINKYFNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58731; Mature: 58600
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKLKNYQEFPKMKNNFVENIKDEKYFYSLIEDVENSKVGFYSVGLYPASLAYNCAMHG CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHEECC KSNNILLAPREDRDLLGAFSKDVISGMDNEIIEKIKRMGNYSSEGKIKSFDLNDLLLKCE CCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECHHHEEEEEE IVILASNSNHIQDDVKNALELRKNLKRENVVLGCLVGSFCIDNKNKNPFILCNKYPNLAF EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCEEEEECCCCCEE FTGFHRHGALRNPNDSFTANFCHPNALTALIGARILNQLSPKIQVSPGVHNIECQYIKSI EECHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH KNISSIFAGFVNNFHSDKPGMLPTINTILLTQCLDQAASVSIKVRKKNKLENKYLSLKEL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHC GYGEEIISAREINNEKFCEKGDYTFSQLNAVKADVLGSMTLPTEGKPTRNFQAGQVLSDM CCCHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH LLQLNRCPKDVSEFVNWCNKYSLSQGGLEGLKSLKFWPDIYKEFKIKNNNCSMINLIYLC HHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHEECCCCCCEEEEEEEE FNANSEEKKEIYKVLISSEEITNFCQESVKSELSFELNEKLKGDYLFDDIENFYKKLFTN ECCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHCC KEQNALKTNKYSNQISKKNPSYINVLKIINKYFNN CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure GKKLKNYQEFPKMKNNFVENIKDEKYFYSLIEDVENSKVGFYSVGLYPASLAYNCAMHG CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHEECC KSNNILLAPREDRDLLGAFSKDVISGMDNEIIEKIKRMGNYSSEGKIKSFDLNDLLLKCE CCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECHHHEEEEEE IVILASNSNHIQDDVKNALELRKNLKRENVVLGCLVGSFCIDNKNKNPFILCNKYPNLAF EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCEEEEECCCCCEE FTGFHRHGALRNPNDSFTANFCHPNALTALIGARILNQLSPKIQVSPGVHNIECQYIKSI EECHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH KNISSIFAGFVNNFHSDKPGMLPTINTILLTQCLDQAASVSIKVRKKNKLENKYLSLKEL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHC GYGEEIISAREINNEKFCEKGDYTFSQLNAVKADVLGSMTLPTEGKPTRNFQAGQVLSDM CCCHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH LLQLNRCPKDVSEFVNWCNKYSLSQGGLEGLKSLKFWPDIYKEFKIKNNNCSMINLIYLC HHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHEECCCCCCEEEEEEEE FNANSEEKKEIYKVLISSEEITNFCQESVKSELSFELNEKLKGDYLFDDIENFYKKLFTN ECCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHCC KEQNALKTNKYSNQISKKNPSYINVLKIINKYFNN CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA